RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 LGALS3P17931 250 aaKnown RBP11.9□□□□□ -0.5
CPNE1-220ENST00000458038 DPM2O94777 84 aa11.89□□□□□ -0.51
CPNE1-220ENST00000458038 HINT1P49773 126 aaPredicted RBP11.89□□□□□ -0.51
CPNE1-220ENST00000458038 ZNF73O43830 326 aaPredicted RBP11.88□□□□□ -0.51
CPNE1-220ENST00000458038 HSPB8Q9UJY1 196 aa11.88□□□□□ -0.51
CPNE1-220ENST00000458038 IGKCP01834 107 aa11.85□□□□□ -0.51
CPNE1-220ENST00000458038 SLC25A34Q6PIV7 304 aa11.85□□□□□ -0.51
CPNE1-220ENST00000458038 LIMD2Q9BT23 127 aa11.84□□□□□ -0.51
CPNE1-220ENST00000458038 SERF1AO75920 110 aa11.83□□□□□ -0.52
CPNE1-220ENST00000458038 ST20-AS1Q8NBB2 130 aa11.82□□□□□ -0.52
CPNE1-220ENST00000458038 TRGC2P03986 189 aa11.81□□□□□ -0.52
CPNE1-220ENST00000458038 SOSTDC1Q6X4U4 206 aa11.81□□□□□ -0.52
CPNE1-220ENST00000458038 A0A0J9YXY3 114 aa11.8□□□□□ -0.52
CPNE1-220ENST00000458038 SPRR1BP22528 89 aa11.8□□□□□ -0.52
CPNE1-220ENST00000458038 DHRS4-AS1Q9P1J3 65 aa11.8□□□□□ -0.52
CPNE1-220ENST00000458038 FABP4P15090 132 aa11.79□□□□□ -0.52
CPNE1-220ENST00000458038 ADAMTSL4-AS1Q5T5F5 129 aa11.79□□□□□ -0.52
CPNE1-220ENST00000458038 LCE2CQ5TA81 110 aa11.79□□□□□ -0.52
CPNE1-220ENST00000458038 LINC00310P59036 64 aa11.78□□□□□ -0.52
CPNE1-220ENST00000458038 EIF4EBP3O60516 100 aaPredicted RBP11.77□□□□□ -0.53
CPNE1-220ENST00000458038 NPC2P61916 151 aa11.77□□□□□ -0.53
CPNE1-220ENST00000458038 PMCHL2Q9BQD1 86 aa11.77□□□□□ -0.53
CPNE1-220ENST00000458038 LAMTOR3Q9UHA4 124 aa11.77□□□□□ -0.53
CPNE1-220ENST00000458038 E9PLD3 99 aa11.76□□□□□ -0.53
CPNE1-220ENST00000458038 SPANXCQ9NY87 97 aa11.76□□□□□ -0.53
CPNE1-220ENST00000458038 CRCT1Q9UGL9 99 aa11.76□□□□□ -0.53
CPNE1-220ENST00000458038 OR13C6PQ8NH95 151 aa11.74□□□□□ -0.53
CPNE1-220ENST00000458038 CD164Q04900 197 aa11.73□□□□□ -0.53
CPNE1-220ENST00000458038 PCOTHQ58A44 107 aa11.73□□□□□ -0.53
CPNE1-220ENST00000458038 CFC1BP0CG36 223 aa11.72□□□□□ -0.53
CPNE1-220ENST00000458038 IGLV8-61A0A075B6I0 122 aa11.71□□□□□ -0.53
CPNE1-220ENST00000458038 TIMM17BO60830 172 aa11.71□□□□□ -0.53
CPNE1-220ENST00000458038 KRTAP19-2Q3LHN2 52 aa11.71□□□□□ -0.53
CPNE1-220ENST00000458038 HRCT1Q6UXD1 115 aa11.71□□□□□ -0.53
CPNE1-220ENST00000458038 LINC00308Q8TCZ7 52 aa11.71□□□□□ -0.53
CPNE1-220ENST00000458038 SPANXDQ9BXN6 97 aa11.71□□□□□ -0.53
CPNE1-220ENST00000458038 LINC00518Q8N0U6 118 aa11.69□□□□□ -0.54
CPNE1-220ENST00000458038 C9orf92A6NGG3 77 aa11.68□□□□□ -0.54
CPNE1-220ENST00000458038 LITAFQ99732 161 aa11.68□□□□□ -0.54
CPNE1-220ENST00000458038 ELOF1P60002 83 aaKnown RBP11.67□□□□□ -0.54
CPNE1-220ENST00000458038 MT1HP80294 61 aa11.67□□□□□ -0.54
CPNE1-220ENST00000458038 PRO1933Q9H354 126 aa11.67□□□□□ -0.54
CPNE1-220ENST00000458038 COX7BP24311 80 aa11.66□□□□□ -0.54
CPNE1-220ENST00000458038 TAL2Q16559 108 aa11.66□□□□□ -0.54
CPNE1-220ENST00000458038 FSIP2Q5CZC0 6907 aa11.65□□□□□ -0.54
CPNE1-220ENST00000458038 Q5XG85 94 aa11.65□□□□□ -0.54
CPNE1-220ENST00000458038 TEX49A0A1B0GTD5 131 aa11.64□□□□□ -0.55
CPNE1-220ENST00000458038 H7C2G1 150 aa11.63□□□□□ -0.55
CPNE1-220ENST00000458038 TRBV7-6A0A0J9YX20 115 aa11.62□□□□□ -0.55
CPNE1-220ENST00000458038 SYS1-DBNDD2H3BUS1 97 aa11.62□□□□□ -0.55
CPNE1-220ENST00000458038 C6orf99Q4VX62 202 aa11.62□□□□□ -0.55
CPNE1-220ENST00000458038 AKR1D1P51857 326 aa11.61□□□□□ -0.55
CPNE1-220ENST00000458038 Q1RN00 199 aa11.61□□□□□ -0.55
CPNE1-220ENST00000458038 DEFB105AQ8NG35 78 aa11.6□□□□□ -0.55
CPNE1-220ENST00000458038 ZNF815PA8K554 130 aa11.59□□□□□ -0.55
CPNE1-220ENST00000458038 COLCA2A8K830 154 aa11.57□□□□□ -0.56
CPNE1-220ENST00000458038 LINC01545Q5VT33 79 aa11.57□□□□□ -0.56
CPNE1-220ENST00000458038 C1orf195Q5TG92 126 aa11.56□□□□□ -0.56
CPNE1-220ENST00000458038 COPS9Q8WXC6 57 aa11.56□□□□□ -0.56
CPNE1-220ENST00000458038 A0A1B0GWB2 263 aa11.55□□□□□ -0.56
CPNE1-220ENST00000458038 PET117Q6UWS5 81 aa11.55□□□□□ -0.56
CPNE1-220ENST00000458038 IGLV5-48A0A075B6I7 105 aa11.53□□□□□ -0.56
CPNE1-220ENST00000458038 LORP23490 312 aaPredicted RBP11.53□□□□□ -0.56
CPNE1-220ENST00000458038 SMIM29Q86T20 159 aa11.53□□□□□ -0.56
CPNE1-220ENST00000458038 KRTAP10-6P60371 365 aaPredicted RBP11.52□□□□□ -0.57
CPNE1-220ENST00000458038 A4D1N5 150 aa11.51□□□□□ -0.57
CPNE1-220ENST00000458038 RPL37P61927 97 aaKnown RBP11.51□□□□□ -0.57
CPNE1-220ENST00000458038 IFITM1P13164 125 aa11.49□□□□□ -0.57
CPNE1-220ENST00000458038 SCGB1D4Q6XE38 83 aa11.49□□□□□ -0.57
CPNE1-220ENST00000458038 M0R2T5 61 aa11.48□□□□□ -0.57
CPNE1-220ENST00000458038 TCL1BO95988 128 aa11.48□□□□□ -0.57
CPNE1-220ENST00000458038 Q6ZVH6 145 aa11.48□□□□□ -0.57
CPNE1-220ENST00000458038 TTTY13Q9BZ97 58 aa11.48□□□□□ -0.57
CPNE1-220ENST00000458038 NHP2Q9NX24 153 aaKnown RBP11.48□□□□□ -0.57
CPNE1-220ENST00000458038 COX6B2Q6YFQ2 88 aa11.47□□□□□ -0.57
CPNE1-220ENST00000458038 A6NDN8 102 aa11.46□□□□□ -0.57
CPNE1-220ENST00000458038 HIST1H2BKO60814 126 aa11.46□□□□□ -0.57
CPNE1-220ENST00000458038 HIST1H2BJP06899 126 aa11.46□□□□□ -0.57
CPNE1-220ENST00000458038 HIST1H2BOP23527 126 aa11.46□□□□□ -0.57
CPNE1-220ENST00000458038 HIST1H2BBP33778 126 aa11.46□□□□□ -0.57
CPNE1-220ENST00000458038 HIST1H2BDP58876 126 aa11.46□□□□□ -0.57
CPNE1-220ENST00000458038 HIST1H2BCP62807 126 aa11.46□□□□□ -0.57
CPNE1-220ENST00000458038 HIST2H2BEQ16778 126 aa11.46□□□□□ -0.57
CPNE1-220ENST00000458038 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.46□□□□□ -0.57
CPNE1-220ENST00000458038 HIST1H2BHQ93079 126 aa11.46□□□□□ -0.57
CPNE1-220ENST00000458038 HIST1H2BNQ99877 126 aa11.46□□□□□ -0.57
CPNE1-220ENST00000458038 HIST1H2BMQ99879 126 aa11.46□□□□□ -0.57
CPNE1-220ENST00000458038 C3orf79P0CE67 100 aa11.42□□□□□ -0.58
CPNE1-220ENST00000458038 TRAV13-2A0A0B4J235 113 aa11.4□□□□□ -0.58
CPNE1-220ENST00000458038 A0A0G2JQZ4 141 aa11.4□□□□□ -0.58
CPNE1-220ENST00000458038 F8WEM9 126 aa11.38□□□□□ -0.59
CPNE1-220ENST00000458038 C20orf202A1L168 122 aa11.37□□□□□ -0.59
CPNE1-220ENST00000458038 MUSTN1Q8IVN3 82 aa11.37□□□□□ -0.59
CPNE1-220ENST00000458038 SLC7A5P1Q8MH63 180 aa11.37□□□□□ -0.59
CPNE1-220ENST00000458038 KRTDAPP60985 99 aa11.36□□□□□ -0.59
CPNE1-220ENST00000458038 VAMP3Q15836 100 aa11.35□□□□□ -0.59
CPNE1-220ENST00000458038 SMIM11BQ8TCY0 68 aa11.35□□□□□ -0.59
CPNE1-220ENST00000458038 FLGP20930 4061 aaPredicted RBP11.34□□□□□ -0.59
CPNE1-220ENST00000458038 ANKRD39Q53RE8 183 aa11.33□□□□□ -0.6
CPNE1-220ENST00000458038 Q6JHZ5 121 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms