RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 MT-ATP8P03928 68 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 LGALS3P17931 250 aaKnown RBP3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 BVES-AS1Q5T3Y7 98 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 C2orf91Q6ZV80 131 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 ANKRD29Q8N6D5 301 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 COX7B2Q8TF08 81 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 KRTAP1-5Q9BYS1 174 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 NDUFA12Q9UI09 145 aa3.35□□□□□ -1.87
HMGB1P4-201ENST00000455362 HECTD4Q9Y4D8 3996 aa3.34□□□□□ -1.87
HMGB1P4-201ENST00000455362 IGKV2D-24A0A075B6R9 120 aa3.34□□□□□ -1.87
HMGB1P4-201ENST00000455362 NBDYA0A0U1RRE5 68 aa3.34□□□□□ -1.87
HMGB1P4-201ENST00000455362 TLX1NBP0CAT3 122 aa3.34□□□□□ -1.87
HMGB1P4-201ENST00000455362 RMI2Q96E14 147 aa3.34□□□□□ -1.87
HMGB1P4-201ENST00000455362 ZNF625Q96I27 306 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P4-201ENST00000455362 TOMM7Q9P0U1 55 aa3.34□□□□□ -1.87
HMGB1P4-201ENST00000455362 HIGD1BQ9P298 99 aa3.34□□□□□ -1.87
HMGB1P4-201ENST00000455362 DNAH17Q9UFH2 4485 aa3.34□□□□□ -1.88
HMGB1P4-201ENST00000455362 A0A087WYN8 130 aa3.33□□□□□ -1.88
HMGB1P4-201ENST00000455362 NDUFA1O15239 70 aa3.33□□□□□ -1.88
HMGB1P4-201ENST00000455362 APOMO95445 188 aa3.33□□□□□ -1.88
HMGB1P4-201ENST00000455362 Q5XG85 94 aa3.33□□□□□ -1.88
HMGB1P4-201ENST00000455362 Q8IZM0 81 aa3.33□□□□□ -1.88
HMGB1P4-201ENST00000455362 SACSQ9NZJ4 4579 aa3.33□□□□□ -1.88
HMGB1P4-201ENST00000455362 FRAS1Q86XX4 4008 aa3.32□□□□□ -1.88
HMGB1P4-201ENST00000455362 TIMM17BO60830 172 aa3.32□□□□□ -1.88
HMGB1P4-201ENST00000455362 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
HMGB1P4-201ENST00000455362 C2orf82Q6UX34 121 aa3.32□□□□□ -1.88
HMGB1P4-201ENST00000455362 Q6ZR54 194 aa3.32□□□□□ -1.88
HMGB1P4-201ENST00000455362 C15orf56Q8N910 161 aa3.32□□□□□ -1.88
HMGB1P4-201ENST00000455362 LINC00526Q96FQ7 95 aa3.32□□□□□ -1.88
HMGB1P4-201ENST00000455362 GVQW2A0A096LPI5 108 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 A0A1B0GX51 115 aa3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 M0R2N4 97 aa3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 LY6G6CO95867 125 aa3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 SPAG11BQ08648 103 aa3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 CIRBPQ14011 172 aaKnown RBP3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 C14orf177Q52M58 125 aa3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 SFTA2Q6UW10 78 aa3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 UNQ6190/PRO20217Q6UXQ8 127 aa3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 TMEM126AQ9H061 195 aa3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 HYDINQ4G0P3 5121 aa3.31□□□□□ -1.88
HMGB1P4-201ENST00000455362 SMIM13P0DJ93 91 aa3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 LINC00313P59037 77 aa3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 RPS28P62857 69 aaKnown RBP3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 SYCNQ0VAF6 134 aa3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 Q6ZRN7 208 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 GTF2H5Q6ZYL4 71 aa3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 SPANXDQ9BXN6 97 aa3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 SPANXCQ9NY87 97 aa3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 PRO0461Q9UI25 63 aa3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 DNAH11Q96DT5 4516 aa3.3□□□□□ -1.88
HMGB1P4-201ENST00000455362 LRCOL1A6NCL2 159 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 C9JAW5 83 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 LECT2O14960 151 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 PSCAO43653 123 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 NDUFC2O95298 119 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 LINC00158P58513 81 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 COX17Q14061 63 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 WFDC2Q14508 124 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 C9orf116Q5BN46 136 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 MEIG1Q5JSS6 88 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 HRCT1Q6UXD1 115 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 MUSTN1Q8IVN3 82 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 DAND5Q8N907 189 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 CARD19Q96LW7 228 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 FAT2Q9NYQ8 4349 aa3.29□□□□□ -1.88
HMGB1P4-201ENST00000455362 TRBV30A0A0K0K1B3 111 aa3.28□□□□□ -1.88
HMGB1P4-201ENST00000455362 J3KT08 172 aa3.28□□□□□ -1.88
HMGB1P4-201ENST00000455362 K7ERS5 55 aa3.28□□□□□ -1.88
HMGB1P4-201ENST00000455362 IFITM1P13164 125 aa3.28□□□□□ -1.88
HMGB1P4-201ENST00000455362 FXYD2P54710 66 aa3.28□□□□□ -1.88
HMGB1P4-201ENST00000455362 MIR7-3HGQ8N6C7 128 aa3.28□□□□□ -1.88
HMGB1P4-201ENST00000455362 LINC00308Q8TCZ7 52 aa3.28□□□□□ -1.88
HMGB1P4-201ENST00000455362 C6orf48Q9UBA6 75 aa3.28□□□□□ -1.88
HMGB1P4-201ENST00000455362 PKD1P98161 4303 aa3.27□□□□□ -1.89
HMGB1P4-201ENST00000455362 LOC107984156A0A0G2JMH3 177 aa3.27□□□□□ -1.89
HMGB1P4-201ENST00000455362 KRTAP29-1A8MX34 341 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P4-201ENST00000455362 C1orf134Q5TEV5 83 aa3.27□□□□□ -1.89
HMGB1P4-201ENST00000455362 SOSTDC1Q6X4U4 206 aa3.27□□□□□ -1.89
HMGB1P4-201ENST00000455362 ARL17AQ8IVW1 177 aa3.27□□□□□ -1.89
HMGB1P4-201ENST00000455362 CIRBP-AS1Q8TBR5 109 aa3.27□□□□□ -1.89
HMGB1P4-201ENST00000455362 COPS9Q8WXC6 57 aa3.27□□□□□ -1.89
HMGB1P4-201ENST00000455362 RYR2Q92736 4967 aa3.26□□□□□ -1.89
HMGB1P4-201ENST00000455362 A0A087WTM6 91 aa3.26□□□□□ -1.89
HMGB1P4-201ENST00000455362 A0A1W2PPM0 123 aa3.26□□□□□ -1.89
HMGB1P4-201ENST00000455362 NPC2P61916 151 aa3.26□□□□□ -1.89
HMGB1P4-201ENST00000455362 CNBPP62633 177 aaKnown RBP3.26□□□□□ -1.89
HMGB1P4-201ENST00000455362 KMT2CQ8NEZ4 4911 aaKnown RBP3.26□□□□□ -1.89
HMGB1P4-201ENST00000455362 DNAH5Q8TE73 4624 aa3.25□□□□□ -1.89
HMGB1P4-201ENST00000455362 LCE6AA0A183 80 aa3.25□□□□□ -1.89
HMGB1P4-201ENST00000455362 H3BUT2 72 aa3.25□□□□□ -1.89
HMGB1P4-201ENST00000455362 RTL8CO15255 209 aa3.25□□□□□ -1.89
HMGB1P4-201ENST00000455362 Q6Q795 121 aa3.25□□□□□ -1.89
HMGB1P4-201ENST00000455362 NHP2Q9NX24 153 aaKnown RBP3.25□□□□□ -1.89
HMGB1P4-201ENST00000455362 SPCS1Q9Y6A9 102 aa3.25□□□□□ -1.89
HMGB1P4-201ENST00000455362 DNAH8Q96JB1 4490 aa3.25□□□□□ -1.89
HMGB1P4-201ENST00000455362 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P4-201ENST00000455362 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P4-201ENST00000455362 K7ERJ3 54 aa3.24□□□□□ -1.89
HMGB1P4-201ENST00000455362 LST1O00453 97 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms