RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 ZNF73O43830 326 aaPredicted RBP13.04□□□□□ -0.32
LYSMD2-202ENST00000454181 FSIP2Q5CZC0 6907 aa13.04□□□□□ -0.32
LYSMD2-202ENST00000454181 LEPROTL1O95214 131 aa13.03□□□□□ -0.32
LYSMD2-202ENST00000454181 ST20-AS1Q8NBB2 130 aa13.03□□□□□ -0.32
LYSMD2-202ENST00000454181 LIMD2Q9BT23 127 aa13.03□□□□□ -0.32
LYSMD2-202ENST00000454181 CBY1Q9Y3M2 126 aa13.03□□□□□ -0.32
LYSMD2-202ENST00000454181 C5orf52A6NGY3 159 aa13.02□□□□□ -0.33
LYSMD2-202ENST00000454181 LCE2CQ5TA81 110 aa13.01□□□□□ -0.33
LYSMD2-202ENST00000454181 SLC25A34Q6PIV7 304 aa13□□□□□ -0.33
LYSMD2-202ENST00000454181 IGLV8-61A0A075B6I0 122 aa12.99□□□□□ -0.33
LYSMD2-202ENST00000454181 DPM2O94777 84 aa12.99□□□□□ -0.33
LYSMD2-202ENST00000454181 NPC2P61916 151 aa12.99□□□□□ -0.33
LYSMD2-202ENST00000454181 PCOTHQ58A44 107 aa12.99□□□□□ -0.33
LYSMD2-202ENST00000454181 HRCT1Q6UXD1 115 aa12.99□□□□□ -0.33
LYSMD2-202ENST00000454181 C9orf92A6NGG3 77 aa12.96□□□□□ -0.33
LYSMD2-202ENST00000454181 CFC1BP0CG36 223 aa12.96□□□□□ -0.33
LYSMD2-202ENST00000454181 YPEL4Q96NS1 127 aa12.96□□□□□ -0.33
LYSMD2-202ENST00000454181 HSPB8Q9UJY1 196 aa12.96□□□□□ -0.33
LYSMD2-202ENST00000454181 IGKCP01834 107 aa12.95□□□□□ -0.34
LYSMD2-202ENST00000454181 SOSTDC1Q6X4U4 206 aa12.94□□□□□ -0.34
LYSMD2-202ENST00000454181 PMCHL2Q9BQD1 86 aa12.94□□□□□ -0.34
LYSMD2-202ENST00000454181 LAMTOR3Q9UHA4 124 aa12.94□□□□□ -0.34
LYSMD2-202ENST00000454181 OR13C6PQ8NH95 151 aa12.93□□□□□ -0.34
LYSMD2-202ENST00000454181 SERF1AO75920 110 aa12.92□□□□□ -0.34
LYSMD2-202ENST00000454181 FABP4P15090 132 aa12.92□□□□□ -0.34
LYSMD2-202ENST00000454181 MT1HP80294 61 aa12.92□□□□□ -0.34
LYSMD2-202ENST00000454181 DHRS4-AS1Q9P1J3 65 aa12.92□□□□□ -0.34
LYSMD2-202ENST00000454181 A0A0J9YXY3 114 aa12.91□□□□□ -0.34
LYSMD2-202ENST00000454181 SPRR1BP22528 89 aa12.91□□□□□ -0.34
LYSMD2-202ENST00000454181 ADAMTSL4-AS1Q5T5F5 129 aa12.91□□□□□ -0.34
LYSMD2-202ENST00000454181 EIF4EBP3O60516 100 aaPredicted RBP12.9□□□□□ -0.34
LYSMD2-202ENST00000454181 KRTAP19-2Q3LHN2 52 aa12.9□□□□□ -0.34
LYSMD2-202ENST00000454181 TRGC2P03986 189 aa12.88□□□□□ -0.35
LYSMD2-202ENST00000454181 SPANXCQ9NY87 97 aa12.86□□□□□ -0.35
LYSMD2-202ENST00000454181 TAL2Q16559 108 aa12.85□□□□□ -0.35
LYSMD2-202ENST00000454181 LINC00310P59036 64 aa12.84□□□□□ -0.35
LYSMD2-202ENST00000454181 E9PLD3 99 aa12.83□□□□□ -0.36
LYSMD2-202ENST00000454181 CD164Q04900 197 aa12.83□□□□□ -0.36
LYSMD2-202ENST00000454181 PRO1933Q9H354 126 aa12.83□□□□□ -0.36
LYSMD2-202ENST00000454181 DEFB105AQ8NG35 78 aa12.82□□□□□ -0.36
LYSMD2-202ENST00000454181 LINC00308Q8TCZ7 52 aa12.82□□□□□ -0.36
LYSMD2-202ENST00000454181 COX7BP24311 80 aa12.81□□□□□ -0.36
LYSMD2-202ENST00000454181 Q1RN00 199 aa12.81□□□□□ -0.36
LYSMD2-202ENST00000454181 SPANXDQ9BXN6 97 aa12.81□□□□□ -0.36
LYSMD2-202ENST00000454181 H7C2G1 150 aa12.8□□□□□ -0.36
LYSMD2-202ENST00000454181 M0R2T5 61 aa12.8□□□□□ -0.36
LYSMD2-202ENST00000454181 ELOF1P60002 83 aaKnown RBP12.77□□□□□ -0.37
LYSMD2-202ENST00000454181 C6orf99Q4VX62 202 aa12.77□□□□□ -0.37
LYSMD2-202ENST00000454181 TEX49A0A1B0GTD5 131 aa12.76□□□□□ -0.37
LYSMD2-202ENST00000454181 TIMM17BO60830 172 aa12.76□□□□□ -0.37
LYSMD2-202ENST00000454181 AKR1D1P51857 326 aa12.76□□□□□ -0.37
LYSMD2-202ENST00000454181 LINC00518Q8N0U6 118 aa12.76□□□□□ -0.37
LYSMD2-202ENST00000454181 KRTAP10-6P60371 365 aaPredicted RBP12.75□□□□□ -0.37
LYSMD2-202ENST00000454181 COX6B2Q6YFQ2 88 aa12.75□□□□□ -0.37
LYSMD2-202ENST00000454181 LITAFQ99732 161 aa12.75□□□□□ -0.37
LYSMD2-202ENST00000454181 LORP23490 312 aaPredicted RBP12.74□□□□□ -0.37
LYSMD2-202ENST00000454181 Q5XG85 94 aa12.72□□□□□ -0.37
LYSMD2-202ENST00000454181 ZNF815PA8K554 130 aa12.7□□□□□ -0.38
LYSMD2-202ENST00000454181 C1orf195Q5TG92 126 aa12.7□□□□□ -0.38
LYSMD2-202ENST00000454181 RPL37P61927 97 aaKnown RBP12.69□□□□□ -0.38
LYSMD2-202ENST00000454181 SYS1-DBNDD2H3BUS1 97 aa12.68□□□□□ -0.38
LYSMD2-202ENST00000454181 TRBV7-6A0A0J9YX20 115 aa12.66□□□□□ -0.38
LYSMD2-202ENST00000454181 A0A1B0GWB2 263 aa12.64□□□□□ -0.39
LYSMD2-202ENST00000454181 SMIM29Q86T20 159 aa12.64□□□□□ -0.39
LYSMD2-202ENST00000454181 TCL1BO95988 128 aa12.62□□□□□ -0.39
LYSMD2-202ENST00000454181 A0A0G2JQZ4 141 aa12.61□□□□□ -0.39
LYSMD2-202ENST00000454181 COPS9Q8WXC6 57 aa12.61□□□□□ -0.39
LYSMD2-202ENST00000454181 IGLV5-48A0A075B6I7 105 aa12.6□□□□□ -0.39
LYSMD2-202ENST00000454181 A6NDN8 102 aa12.6□□□□□ -0.39
LYSMD2-202ENST00000454181 LINC01545Q5VT33 79 aa12.59□□□□□ -0.39
LYSMD2-202ENST00000454181 SCGB1D4Q6XE38 83 aa12.59□□□□□ -0.39
LYSMD2-202ENST00000454181 TTTY13Q9BZ97 58 aa12.59□□□□□ -0.39
LYSMD2-202ENST00000454181 PET117Q6UWS5 81 aa12.58□□□□□ -0.4
LYSMD2-202ENST00000454181 COLCA2A8K830 154 aa12.57□□□□□ -0.4
LYSMD2-202ENST00000454181 A4D1N5 150 aa12.56□□□□□ -0.4
LYSMD2-202ENST00000454181 NHP2Q9NX24 153 aaKnown RBP12.56□□□□□ -0.4
LYSMD2-202ENST00000454181 F8WEM9 126 aa12.53□□□□□ -0.4
LYSMD2-202ENST00000454181 IFITM1P13164 125 aa12.53□□□□□ -0.4
LYSMD2-202ENST00000454181 Q6Q795 121 aa12.49□□□□□ -0.41
LYSMD2-202ENST00000454181 Q6ZVH6 145 aa12.48□□□□□ -0.41
LYSMD2-202ENST00000454181 PCP2Q8IVA1 136 aa12.48□□□□□ -0.41
LYSMD2-202ENST00000454181 HIST1H2BKO60814 126 aa12.47□□□□□ -0.41
LYSMD2-202ENST00000454181 HIST1H2BJP06899 126 aa12.47□□□□□ -0.41
LYSMD2-202ENST00000454181 HIST1H2BOP23527 126 aa12.47□□□□□ -0.41
LYSMD2-202ENST00000454181 HIST1H2BBP33778 126 aa12.47□□□□□ -0.41
LYSMD2-202ENST00000454181 HIST1H2BDP58876 126 aa12.47□□□□□ -0.41
LYSMD2-202ENST00000454181 HIST1H2BCP62807 126 aa12.47□□□□□ -0.41
LYSMD2-202ENST00000454181 HIST2H2BEQ16778 126 aa12.47□□□□□ -0.41
LYSMD2-202ENST00000454181 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.47□□□□□ -0.41
LYSMD2-202ENST00000454181 HIST1H2BHQ93079 126 aa12.47□□□□□ -0.41
LYSMD2-202ENST00000454181 HIST1H2BNQ99877 126 aa12.47□□□□□ -0.41
LYSMD2-202ENST00000454181 HIST1H2BMQ99879 126 aa12.47□□□□□ -0.41
LYSMD2-202ENST00000454181 MUSTN1Q8IVN3 82 aa12.46□□□□□ -0.41
LYSMD2-202ENST00000454181 TRAV13-2A0A0B4J235 113 aa12.45□□□□□ -0.42
LYSMD2-202ENST00000454181 C3orf79P0CE67 100 aa12.45□□□□□ -0.42
LYSMD2-202ENST00000454181 ATP11AUNQ6ZP68 121 aa12.45□□□□□ -0.42
LYSMD2-202ENST00000454181 KRTDAPP60985 99 aa12.44□□□□□ -0.42
LYSMD2-202ENST00000454181 SMIM11BQ8TCY0 68 aa12.44□□□□□ -0.42
LYSMD2-202ENST00000454181 FLGP20930 4061 aaPredicted RBP12.43□□□□□ -0.42
LYSMD2-202ENST00000454181 VAMP3Q15836 100 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms