RNA–Protein interactions for RNA: ENST00000453551.6

PUF60-203, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 1 (best) BASIC

Gene PUF60, Length 1,842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-203ENST00000453551 PRYO14603 147 aa13.76□□□□□ -0.21
PUF60-203ENST00000453551 LINC01547P58512 204 aaPredicted RBP13.76□□□□□ -0.21
PUF60-203ENST00000453551 SPRR1AP35321 89 aa13.73□□□□□ -0.21
PUF60-203ENST00000453551 ANK2Q01484 3957 aa13.73□□□□□ -0.21
PUF60-203ENST00000453551 CASC10Q5T4H9 136 aa13.72□□□□□ -0.21
PUF60-203ENST00000453551 DHRS4-AS1Q9P1J3 65 aa13.72□□□□□ -0.21
PUF60-203ENST00000453551 FBN1P35555 2871 aaKnown RBP13.72□□□□□ -0.21
PUF60-203ENST00000453551 DNAH1Q9P2D7 4330 aa13.71□□□□□ -0.21
PUF60-203ENST00000453551 KRTAP4-16G5E9R7 235 aaPredicted RBP13.71□□□□□ -0.21
PUF60-203ENST00000453551 IGLV1-50A0A075B6I6 118 aa13.7□□□□□ -0.22
PUF60-203ENST00000453551 STAB1Q9NY15 2570 aa13.7□□□□□ -0.22
PUF60-203ENST00000453551 PRB2P02812 416 aaPredicted RBP13.69□□□□□ -0.22
PUF60-203ENST00000453551 Q6ZRX8 168 aa13.69□□□□□ -0.22
PUF60-203ENST00000453551 LOC107984640A0A0U1RRK4 108 aa13.68□□□□□ -0.22
PUF60-203ENST00000453551 HAMPP81172 84 aa13.67□□□□□ -0.22
PUF60-203ENST00000453551 HUWE1Q7Z6Z7 4374 aaKnown RBP13.67□□□□□ -0.22
PUF60-203ENST00000453551 KRTAP7-1Q8IUC3 87 aa13.66□□□□□ -0.22
PUF60-203ENST00000453551 IGLV5-48A0A075B6I7 105 aa13.65□□□□□ -0.22
PUF60-203ENST00000453551 Q8N377 158 aa13.65□□□□□ -0.22
PUF60-203ENST00000453551 PKD1L1Q8TDX9 2849 aa13.65□□□□□ -0.22
PUF60-203ENST00000453551 SMIM20Q8N5G0 67 aa13.63□□□□□ -0.23
PUF60-203ENST00000453551 A0A1B0GW54 56 aa13.62□□□□□ -0.23
PUF60-203ENST00000453551 FAM168BA1KXE4 195 aa13.62□□□□□ -0.23
PUF60-203ENST00000453551 ETDCA0A1B0GVM5 59 aa13.62□□□□□ -0.23
PUF60-203ENST00000453551 MRPL55Q7Z7F7 128 aaKnown RBP13.61□□□□□ -0.23
PUF60-203ENST00000453551 Q9BRP9 147 aa13.61□□□□□ -0.23
PUF60-203ENST00000453551 TRAV7A0A075B6U4 112 aa13.6□□□□□ -0.23
PUF60-203ENST00000453551 RPL37AP8A6NKH3 93 aa13.59□□□□□ -0.23
PUF60-203ENST00000453551 TMEM258P61165 79 aa13.59□□□□□ -0.23
PUF60-203ENST00000453551 TNP2Q05952 138 aa13.57□□□□□ -0.24
PUF60-203ENST00000453551 CYSTM1Q9H1C7 97 aa13.57□□□□□ -0.24
PUF60-203ENST00000453551 CNBPP62633 177 aaKnown RBP13.57□□□□□ -0.24
PUF60-203ENST00000453551 FAM19A5Q7Z5A7 132 aaPredicted RBP13.54□□□□□ -0.24
PUF60-203ENST00000453551 DEFB105AQ8NG35 78 aa13.54□□□□□ -0.24
PUF60-203ENST00000453551 C16orf90A8MZG2 172 aa13.51□□□□□ -0.25
PUF60-203ENST00000453551 NREPQ16612 68 aa13.51□□□□□ -0.25
PUF60-203ENST00000453551 REG3GQ6UW15 175 aa13.51□□□□□ -0.25
PUF60-203ENST00000453551 KRTAP1-5Q9BYS1 174 aa13.51□□□□□ -0.25
PUF60-203ENST00000453551 APLNQ9ULZ1 77 aa13.51□□□□□ -0.25
PUF60-203ENST00000453551 RPS28P62857 69 aaKnown RBP13.5□□□□□ -0.25
PUF60-203ENST00000453551 NOTCH1P46531 2555 aa13.5□□□□□ -0.25
PUF60-203ENST00000453551 SCXQ7RTU7 201 aa13.49□□□□□ -0.25
PUF60-203ENST00000453551 FUSP35637 526 aaKnown RBP eCLIP13.48□□□□□ -0.25
PUF60-203ENST00000453551 C14orf177Q52M58 125 aa13.48□□□□□ -0.25
PUF60-203ENST00000453551 ST20-AS1Q8NBB2 130 aa13.47□□□□□ -0.25
PUF60-203ENST00000453551 A0A1W2PNM2 257 aa13.46□□□□□ -0.25
PUF60-203ENST00000453551 J3KT08 172 aa13.46□□□□□ -0.25
PUF60-203ENST00000453551 Q8NBF4 154 aa13.46□□□□□ -0.25
PUF60-203ENST00000453551 A0A096LNI7 61 aa13.46□□□□□ -0.26
PUF60-203ENST00000453551 ERC2-IT1O76042 136 aa13.46□□□□□ -0.26
PUF60-203ENST00000453551 IGKV4-1P06312 121 aa13.46□□□□□ -0.26
PUF60-203ENST00000453551 C1orf137Q5JT78 98 aa13.46□□□□□ -0.26
PUF60-203ENST00000453551 UBE2BP63146 152 aa13.45□□□□□ -0.26
PUF60-203ENST00000453551 SPRR4Q96PI1 79 aa13.45□□□□□ -0.26
PUF60-203ENST00000453551 UBE2DNLQ8IWF7 75 aa13.44□□□□□ -0.26
PUF60-203ENST00000453551 C20orf197Q8N268 126 aa13.43□□□□□ -0.26
PUF60-203ENST00000453551 DYNC2H1Q8NCM8 4307 aaKnown RBP13.43□□□□□ -0.26
PUF60-203ENST00000453551 C3orf84H3BNL1 204 aa13.43□□□□□ -0.26
PUF60-203ENST00000453551 BPY2O14599 106 aa13.43□□□□□ -0.26
PUF60-203ENST00000453551 B9D2Q9BPU9 175 aa13.43□□□□□ -0.26
PUF60-203ENST00000453551 PSCAO43653 123 aa13.42□□□□□ -0.26
PUF60-203ENST00000453551 KLKP1Q107X0 134 aa13.42□□□□□ -0.26
PUF60-203ENST00000453551 COL6A5A8TX70 2615 aa13.41□□□□□ -0.26
PUF60-203ENST00000453551 SMIM29Q86T20 159 aa13.41□□□□□ -0.26
PUF60-203ENST00000453551 PKIGQ9Y2B9 76 aa13.4□□□□□ -0.26
PUF60-203ENST00000453551 NBEAL1Q6ZS30 2694 aa13.4□□□□□ -0.26
PUF60-203ENST00000453551 A0A1W2PNN7 141 aa13.39□□□□□ -0.27
PUF60-203ENST00000453551 DPH3Q96FX2 82 aa13.39□□□□□ -0.27
PUF60-203ENST00000453551 DNAH9Q9NYC9 4486 aa13.38□□□□□ -0.27
PUF60-203ENST00000453551 IGLV8-61A0A075B6I0 122 aa13.36□□□□□ -0.27
PUF60-203ENST00000453551 IGKV2-24A0A0C4DH68 120 aa13.34□□□□□ -0.27
PUF60-203ENST00000453551 Q8N9L7 120 aa13.34□□□□□ -0.27
PUF60-203ENST00000453551 F8WEM9 126 aa13.33□□□□□ -0.28
PUF60-203ENST00000453551 H0Y9J4 135 aa13.33□□□□□ -0.28
PUF60-203ENST00000453551 H7BZZ5 65 aa13.33□□□□□ -0.28
PUF60-203ENST00000453551 LINC00476Q8WZB0 136 aa13.32□□□□□ -0.28
PUF60-203ENST00000453551 LRCOL1A6NCL2 159 aa13.31□□□□□ -0.28
PUF60-203ENST00000453551 C9orf163Q8N9P6 203 aa13.31□□□□□ -0.28
PUF60-203ENST00000453551 NUPR2A6NF83 97 aa13.3□□□□□ -0.28
PUF60-203ENST00000453551 NDUFC1O43677 76 aa13.3□□□□□ -0.28
PUF60-203ENST00000453551 OCR1Q9BZK8 76 aa13.29□□□□□ -0.28
PUF60-203ENST00000453551 NBDYA0A0U1RRE5 68 aa13.29□□□□□ -0.28
PUF60-203ENST00000453551 FAM236DA0A1B0GTK5 79 aa13.28□□□□□ -0.28
PUF60-203ENST00000453551 FAM236CP0DP71 79 aa13.28□□□□□ -0.28
PUF60-203ENST00000453551 PRLHP81277 87 aa13.28□□□□□ -0.28
PUF60-203ENST00000453551 SPRR1BP22528 89 aa13.27□□□□□ -0.28
PUF60-203ENST00000453551 SVIPQ8NHG7 77 aa13.27□□□□□ -0.28
PUF60-203ENST00000453551 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.27□□□□□ -0.29
PUF60-203ENST00000453551 IGFL1Q6UW32 110 aa13.25□□□□□ -0.29
PUF60-203ENST00000453551 Q6ZRN7 208 aaPredicted RBP13.25□□□□□ -0.29
PUF60-203ENST00000453551 LINC00474Q9P2X8 69 aa13.25□□□□□ -0.29
PUF60-203ENST00000453551 MGAM2Q2M2H8 2515 aa13.25□□□□□ -0.29
PUF60-203ENST00000453551 PHF5AQ7RTV0 110 aaKnown RBP13.24□□□□□ -0.29
PUF60-203ENST00000453551 DSCR10P59022 87 aa13.23□□□□□ -0.29
PUF60-203ENST00000453551 MDFIQ99750 246 aa13.23□□□□□ -0.29
PUF60-203ENST00000453551 TMEM254Q8TBM7 123 aa13.23□□□□□ -0.29
PUF60-203ENST00000453551 SNURFQ9Y675 71 aa13.23□□□□□ -0.29
PUF60-203ENST00000453551 CHTF8P0CG12 524 aa13.22□□□□□ -0.29
PUF60-203ENST00000453551 HIGD2AQ9BW72 106 aa13.22□□□□□ -0.29
PUF60-203ENST00000453551 KRTAP11-1Q8IUC1 163 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms