RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 IFI27L1Q96BM0 104 aa7.73□□□□□ -1.17
LYSMD3-202ENST00000453259 TRAPPC1Q9Y5R8 145 aa7.73□□□□□ -1.17
LYSMD3-202ENST00000453259 TRAV23DV6A0A075B6W5 121 aa7.72□□□□□ -1.17
LYSMD3-202ENST00000453259 M0R2T5 61 aa7.72□□□□□ -1.17
LYSMD3-202ENST00000453259 TMEM238LA0A1B0GVL6 79 aa7.71□□□□□ -1.18
LYSMD3-202ENST00000453259 SPRR1BP22528 89 aa7.71□□□□□ -1.18
LYSMD3-202ENST00000453259 HINT1P49773 126 aaPredicted RBP7.71□□□□□ -1.18
LYSMD3-202ENST00000453259 CHCHD1Q96BP2 118 aaKnown RBP7.71□□□□□ -1.18
LYSMD3-202ENST00000453259 ZNF73O43830 326 aaPredicted RBP7.7□□□□□ -1.18
LYSMD3-202ENST00000453259 CD164Q04900 197 aa7.7□□□□□ -1.18
LYSMD3-202ENST00000453259 NMUP48645 174 aa7.69□□□□□ -1.18
LYSMD3-202ENST00000453259 C9orf92A6NGG3 77 aa7.68□□□□□ -1.18
LYSMD3-202ENST00000453259 LEPROTO15243 131 aa7.67□□□□□ -1.18
LYSMD3-202ENST00000453259 Q5XG85 94 aa7.67□□□□□ -1.18
LYSMD3-202ENST00000453259 COX6B2Q6YFQ2 88 aa7.67□□□□□ -1.18
LYSMD3-202ENST00000453259 RPS10P5Q9NQ39 176 aa7.67□□□□□ -1.18
LYSMD3-202ENST00000453259 DHRS4-AS1Q9P1J3 65 aa7.67□□□□□ -1.18
LYSMD3-202ENST00000453259 LAMTOR3Q9UHA4 124 aa7.67□□□□□ -1.18
LYSMD3-202ENST00000453259 EIF4EBP3O60516 100 aaPredicted RBP7.66□□□□□ -1.18
LYSMD3-202ENST00000453259 C10orf91Q5T1B1 145 aa7.66□□□□□ -1.18
LYSMD3-202ENST00000453259 ST20-AS1Q8NBB2 130 aa7.66□□□□□ -1.18
LYSMD3-202ENST00000453259 PLNP26678 52 aa7.65□□□□□ -1.18
LYSMD3-202ENST00000453259 J3QQQ9 107 aa7.64□□□□□ -1.19
LYSMD3-202ENST00000453259 RPL37P61927 97 aaKnown RBP7.64□□□□□ -1.19
LYSMD3-202ENST00000453259 TSPEAR-AS2P59090 65 aa7.63□□□□□ -1.19
LYSMD3-202ENST00000453259 HERVK_113P61574 105 aa7.63□□□□□ -1.19
LYSMD3-202ENST00000453259 PRO1933Q9H354 126 aa7.62□□□□□ -1.19
LYSMD3-202ENST00000453259 HSBP1O75506 76 aa7.61□□□□□ -1.19
LYSMD3-202ENST00000453259 HRCT1Q6UXD1 115 aa7.61□□□□□ -1.19
LYSMD3-202ENST00000453259 H7C2G1 150 aa7.6□□□□□ -1.19
LYSMD3-202ENST00000453259 LGALS3P17931 250 aaKnown RBP7.6□□□□□ -1.19
LYSMD3-202ENST00000453259 KRTAP9-7A8MTY7 169 aa7.59□□□□□ -1.19
LYSMD3-202ENST00000453259 FLGP20930 4061 aaPredicted RBP7.58□□□□□ -1.2
LYSMD3-202ENST00000453259 SPANXCQ9NY87 97 aa7.58□□□□□ -1.2
LYSMD3-202ENST00000453259 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.57□□□□□ -1.2
LYSMD3-202ENST00000453259 DPM2O94777 84 aa7.57□□□□□ -1.2
LYSMD3-202ENST00000453259 C1orf195Q5TG92 126 aa7.57□□□□□ -1.2
LYSMD3-202ENST00000453259 SOSTDC1Q6X4U4 206 aa7.57□□□□□ -1.2
LYSMD3-202ENST00000453259 TEX49A0A1B0GTD5 131 aa7.56□□□□□ -1.2
LYSMD3-202ENST00000453259 LEPROTL1O95214 131 aa7.56□□□□□ -1.2
LYSMD3-202ENST00000453259 AKR1D1P51857 326 aa7.56□□□□□ -1.2
LYSMD3-202ENST00000453259 ELOF1P60002 83 aaKnown RBP7.56□□□□□ -1.2
LYSMD3-202ENST00000453259 SPANXDQ9BXN6 97 aa7.56□□□□□ -1.2
LYSMD3-202ENST00000453259 H0Y8G0 127 aa7.55□□□□□ -1.2
LYSMD3-202ENST00000453259 CFC1P0CG37 223 aa7.55□□□□□ -1.2
LYSMD3-202ENST00000453259 A0A0J9YXY3 114 aa7.54□□□□□ -1.2
LYSMD3-202ENST00000453259 TAL2Q16559 108 aa7.54□□□□□ -1.2
LYSMD3-202ENST00000453259 TRBV7-6A0A0J9YX20 115 aa7.53□□□□□ -1.2
LYSMD3-202ENST00000453259 SNAPINO95295 136 aa7.53□□□□□ -1.2
LYSMD3-202ENST00000453259 IGKCP01834 107 aa7.53□□□□□ -1.2
LYSMD3-202ENST00000453259 Q1RN00 199 aa7.53□□□□□ -1.2
LYSMD3-202ENST00000453259 ADAMTSL4-AS1Q5T5F5 129 aa7.53□□□□□ -1.2
LYSMD3-202ENST00000453259 SMIM29Q86T20 159 aa7.53□□□□□ -1.2
LYSMD3-202ENST00000453259 OR13C6PQ8NH95 151 aa7.53□□□□□ -1.2
LYSMD3-202ENST00000453259 HSPB8Q9UJY1 196 aa7.53□□□□□ -1.2
LYSMD3-202ENST00000453259 COX7BP24311 80 aa7.52□□□□□ -1.21
LYSMD3-202ENST00000453259 SVBPQ8N300 66 aa7.52□□□□□ -1.21
LYSMD3-202ENST00000453259 TIMM17BO60830 172 aa7.51□□□□□ -1.21
LYSMD3-202ENST00000453259 TCL1BO95988 128 aa7.51□□□□□ -1.21
LYSMD3-202ENST00000453259 NPC2P61916 151 aa7.51□□□□□ -1.21
LYSMD3-202ENST00000453259 NDUFA5Q16718 116 aa7.51□□□□□ -1.21
LYSMD3-202ENST00000453259 LINC00518Q8N0U6 118 aa7.51□□□□□ -1.21
LYSMD3-202ENST00000453259 E9PLD3 99 aa7.5□□□□□ -1.21
LYSMD3-202ENST00000453259 LINC00308Q8TCZ7 52 aa7.5□□□□□ -1.21
LYSMD3-202ENST00000453259 IGLV5-48A0A075B6I7 105 aa7.49□□□□□ -1.21
LYSMD3-202ENST00000453259 C6orf99Q4VX62 202 aa7.49□□□□□ -1.21
LYSMD3-202ENST00000453259 APOC3P02656 99 aa7.48□□□□□ -1.21
LYSMD3-202ENST00000453259 DEFB105AQ8NG35 78 aa7.48□□□□□ -1.21
LYSMD3-202ENST00000453259 YPEL4Q96NS1 127 aa7.48□□□□□ -1.21
LYSMD3-202ENST00000453259 LITAFQ99732 161 aa7.47□□□□□ -1.21
LYSMD3-202ENST00000453259 A0A1B0GWB2 263 aa7.46□□□□□ -1.22
LYSMD3-202ENST00000453259 SERF1AO75920 110 aa7.45□□□□□ -1.22
LYSMD3-202ENST00000453259 ATP11AUNQ6ZP68 121 aa7.45□□□□□ -1.22
LYSMD3-202ENST00000453259 A4D1N5 150 aa7.44□□□□□ -1.22
LYSMD3-202ENST00000453259 Q75L30 129 aa7.44□□□□□ -1.22
LYSMD3-202ENST00000453259 PMCHL2Q9BQD1 86 aa7.44□□□□□ -1.22
LYSMD3-202ENST00000453259 NHP2Q9NX24 153 aaKnown RBP7.43□□□□□ -1.22
LYSMD3-202ENST00000453259 LINC00310P59036 64 aa7.42□□□□□ -1.22
LYSMD3-202ENST00000453259 Q6Q795 121 aa7.42□□□□□ -1.22
LYSMD3-202ENST00000453259 COPS9Q8WXC6 57 aa7.42□□□□□ -1.22
LYSMD3-202ENST00000453259 FABP4P15090 132 aa7.41□□□□□ -1.22
LYSMD3-202ENST00000453259 TRGC2P03986 189 aa7.39□□□□□ -1.23
LYSMD3-202ENST00000453259 KRTAP9-8Q9BYQ0 159 aa7.39□□□□□ -1.23
LYSMD3-202ENST00000453259 C20orf202A1L168 122 aa7.38□□□□□ -1.23
LYSMD3-202ENST00000453259 F8WEM9 126 aa7.38□□□□□ -1.23
LYSMD3-202ENST00000453259 ZNF815PA8K554 130 aa7.37□□□□□ -1.23
LYSMD3-202ENST00000453259 Q6JHZ5 121 aa7.37□□□□□ -1.23
LYSMD3-202ENST00000453259 USH2AO75445 5202 aa7.37□□□□□ -1.23
LYSMD3-202ENST00000453259 SSPOA2VEC9 5147 aa7.36□□□□□ -1.23
LYSMD3-202ENST00000453259 A0A0G2JQZ4 141 aa7.36□□□□□ -1.23
LYSMD3-202ENST00000453259 PCP2Q8IVA1 136 aa7.36□□□□□ -1.23
LYSMD3-202ENST00000453259 IFITM1P13164 125 aa7.35□□□□□ -1.23
LYSMD3-202ENST00000453259 SYS1-DBNDD2H3BUS1 97 aa7.34□□□□□ -1.23
LYSMD3-202ENST00000453259 Q6ZVH6 145 aa7.34□□□□□ -1.23
LYSMD3-202ENST00000453259 CLEC2BQ92478 149 aa7.34□□□□□ -1.23
LYSMD3-202ENST00000453259 OBSCN-AS1Q96MR7 158 aa7.34□□□□□ -1.23
LYSMD3-202ENST00000453259 TRBV20-1A0A075B6N2 111 aa7.33□□□□□ -1.24
LYSMD3-202ENST00000453259 TRBV7-7A0A0K0K1E9 115 aa7.33□□□□□ -1.24
LYSMD3-202ENST00000453259 A6NDN8 102 aa7.33□□□□□ -1.24
LYSMD3-202ENST00000453259 KRTAP4-8Q9BYQ9 185 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms