RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 TRAV23DV6A0A075B6W5 121 aa15.16■□□□□ 0.02
USP42-204ENST00000451154 RPS29P62273 56 aaKnown RBP15.15■□□□□ 0.02
USP42-204ENST00000451154 JOSD1Q15040 202 aaPredicted RBP15.14■□□□□ 0.01
USP42-204ENST00000451154 KRTAP4-1Q9BYQ7 146 aa15.14■□□□□ 0.01
USP42-204ENST00000451154 A0A0J9YXY3 114 aa15.13■□□□□ 0.01
USP42-204ENST00000451154 SLC25A20O43772 301 aa15.13■□□□□ 0.01
USP42-204ENST00000451154 ZNF73O43830 326 aaPredicted RBP15.12■□□□□ 0.01
USP42-204ENST00000451154 C9orf153Q5TBE3 101 aa15.12■□□□□ 0.01
USP42-204ENST00000451154 ST20-AS1Q8NBB2 130 aa15.12■□□□□ 0.01
USP42-204ENST00000451154 SEC61BP60468 96 aaKnown RBP15.11■□□□□ 0.01
USP42-204ENST00000451154 COLCA2A8K830 154 aa15.08■□□□□ 0
USP42-204ENST00000451154 E9PLD3 99 aa15.07■□□□□ 0
USP42-204ENST00000451154 HINT1P49773 126 aaPredicted RBP15.03■□□□□ -0
USP42-204ENST00000451154 SLC7A5P1Q8MH63 180 aa15.03■□□□□ -0
USP42-204ENST00000451154 LINC01547P58512 204 aaPredicted RBP15.02■□□□□ -0
USP42-204ENST00000451154 OR13C6PQ8NH95 151 aa15.01□□□□□ -0.01
USP42-204ENST00000451154 LINC00308Q8TCZ7 52 aa15.01□□□□□ -0.01
USP42-204ENST00000451154 XP32Q5T750 250 aa15□□□□□ -0.01
USP42-204ENST00000451154 LITAFQ99732 161 aa15□□□□□ -0.01
USP42-204ENST00000451154 C5orf52A6NGY3 159 aa14.99□□□□□ -0.01
USP42-204ENST00000451154 CBY1Q9Y3M2 126 aa14.99□□□□□ -0.01
USP42-204ENST00000451154 SYS1-DBNDD2H3BUS1 97 aa14.98□□□□□ -0.01
USP42-204ENST00000451154 SPANXCQ9NY87 97 aa14.98□□□□□ -0.01
USP42-204ENST00000451154 KRTAP9-6A0A140TA67 174 aa14.96□□□□□ -0.01
USP42-204ENST00000451154 HRCT1Q6UXD1 115 aa14.95□□□□□ -0.02
USP42-204ENST00000451154 TIMM17BO60830 172 aa14.93□□□□□ -0.02
USP42-204ENST00000451154 SPRR1BP22528 89 aa14.93□□□□□ -0.02
USP42-204ENST00000451154 DHRS4-AS1Q9P1J3 65 aa14.93□□□□□ -0.02
USP42-204ENST00000451154 LINC01545Q5VT33 79 aa14.91□□□□□ -0.02
USP42-204ENST00000451154 TTTY13Q9BZ97 58 aa14.91□□□□□ -0.02
USP42-204ENST00000451154 ZNF815PA8K554 130 aa14.9□□□□□ -0.02
USP42-204ENST00000451154 HIST1H2BKO60814 126 aa14.89□□□□□ -0.03
USP42-204ENST00000451154 HIST1H2BJP06899 126 aa14.89□□□□□ -0.03
USP42-204ENST00000451154 HIST1H2BOP23527 126 aa14.89□□□□□ -0.03
USP42-204ENST00000451154 HIST1H2BBP33778 126 aa14.89□□□□□ -0.03
USP42-204ENST00000451154 HIST1H2BDP58876 126 aa14.89□□□□□ -0.03
USP42-204ENST00000451154 HIST1H2BCP62807 126 aa14.89□□□□□ -0.03
USP42-204ENST00000451154 HIST2H2BEQ16778 126 aa14.89□□□□□ -0.03
USP42-204ENST00000451154 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.89□□□□□ -0.03
USP42-204ENST00000451154 SLC25A34Q6PIV7 304 aa14.89□□□□□ -0.03
USP42-204ENST00000451154 HIST1H2BHQ93079 126 aa14.89□□□□□ -0.03
USP42-204ENST00000451154 HIST1H2BNQ99877 126 aa14.89□□□□□ -0.03
USP42-204ENST00000451154 HIST1H2BMQ99879 126 aa14.89□□□□□ -0.03
USP42-204ENST00000451154 SPANXDQ9BXN6 97 aa14.89□□□□□ -0.03
USP42-204ENST00000451154 LAMTOR3Q9UHA4 124 aa14.88□□□□□ -0.03
USP42-204ENST00000451154 COX7BP24311 80 aa14.86□□□□□ -0.03
USP42-204ENST00000451154 PET117Q6UWS5 81 aa14.86□□□□□ -0.03
USP42-204ENST00000451154 C6orf99Q4VX62 202 aa14.85□□□□□ -0.03
USP42-204ENST00000451154 LIMD2Q9BT23 127 aa14.85□□□□□ -0.03
USP42-204ENST00000451154 ELOF1P60002 83 aaKnown RBP14.84□□□□□ -0.03
USP42-204ENST00000451154 LINC00518Q8N0U6 118 aa14.84□□□□□ -0.03
USP42-204ENST00000451154 DEFB105AQ8NG35 78 aa14.84□□□□□ -0.03
USP42-204ENST00000451154 TAL2Q16559 108 aa14.83□□□□□ -0.04
USP42-204ENST00000451154 Q1RN00 199 aa14.81□□□□□ -0.04
USP42-204ENST00000451154 C9orf92A6NGG3 77 aa14.8□□□□□ -0.04
USP42-204ENST00000451154 C3orf79P0CE67 100 aa14.8□□□□□ -0.04
USP42-204ENST00000451154 PCOTHQ58A44 107 aa14.78□□□□□ -0.04
USP42-204ENST00000451154 LCE2CQ5TA81 110 aa14.78□□□□□ -0.04
USP42-204ENST00000451154 TEX49A0A1B0GTD5 131 aa14.76□□□□□ -0.05
USP42-204ENST00000451154 PRO1933Q9H354 126 aa14.75□□□□□ -0.05
USP42-204ENST00000451154 H7C2G1 150 aa14.74□□□□□ -0.05
USP42-204ENST00000451154 KRTDAPP60985 99 aa14.73□□□□□ -0.05
USP42-204ENST00000451154 CD164Q04900 197 aa14.73□□□□□ -0.05
USP42-204ENST00000451154 LCE2DQ5TA82 110 aaPredicted RBP14.73□□□□□ -0.05
USP42-204ENST00000451154 SCGB1D4Q6XE38 83 aa14.73□□□□□ -0.05
USP42-204ENST00000451154 IGLV8-61A0A075B6I0 122 aa14.72□□□□□ -0.05
USP42-204ENST00000451154 TRBV7-6A0A0J9YX20 115 aa14.72□□□□□ -0.05
USP42-204ENST00000451154 SMIM29Q86T20 159 aa14.72□□□□□ -0.05
USP42-204ENST00000451154 KRTAP19-2Q3LHN2 52 aa14.71□□□□□ -0.05
USP42-204ENST00000451154 A6NDN8 102 aa14.69□□□□□ -0.06
USP42-204ENST00000451154 A0A0G2JQZ4 141 aa14.68□□□□□ -0.06
USP42-204ENST00000451154 AKR1D1P51857 326 aa14.68□□□□□ -0.06
USP42-204ENST00000451154 ANKRD39Q53RE8 183 aa14.68□□□□□ -0.06
USP42-204ENST00000451154 A0A1B0GWB2 263 aa14.67□□□□□ -0.06
USP42-204ENST00000451154 FSIP2Q5CZC0 6907 aa14.67□□□□□ -0.06
USP42-204ENST00000451154 IFITM1P13164 125 aa14.66□□□□□ -0.06
USP42-204ENST00000451154 MUSTN1Q8IVN3 82 aa14.66□□□□□ -0.06
USP42-204ENST00000451154 COPS9Q8WXC6 57 aa14.66□□□□□ -0.06
USP42-204ENST00000451154 COA6Q5JTJ3 125 aaKnown RBP14.64□□□□□ -0.07
USP42-204ENST00000451154 C1orf195Q5TG92 126 aa14.64□□□□□ -0.07
USP42-204ENST00000451154 ATOH7Q8N100 152 aa14.64□□□□□ -0.07
USP42-204ENST00000451154 IGLV5-48A0A075B6I7 105 aa14.63□□□□□ -0.07
USP42-204ENST00000451154 Q5XG85 94 aa14.63□□□□□ -0.07
USP42-204ENST00000451154 C20orf202A1L168 122 aa14.61□□□□□ -0.07
USP42-204ENST00000451154 MT1HP80294 61 aa14.61□□□□□ -0.07
USP42-204ENST00000451154 PCP2Q8IVA1 136 aa14.61□□□□□ -0.07
USP42-204ENST00000451154 Q6ZVH6 145 aa14.6□□□□□ -0.07
USP42-204ENST00000451154 A4D1N5 150 aa14.56□□□□□ -0.08
USP42-204ENST00000451154 SMIM11BQ8TCY0 68 aa14.56□□□□□ -0.08
USP42-204ENST00000451154 TRAV13-2A0A0B4J235 113 aa14.54□□□□□ -0.08
USP42-204ENST00000451154 NHP2Q9NX24 153 aaKnown RBP14.52□□□□□ -0.09
USP42-204ENST00000451154 CRCT1Q9UGL9 99 aa14.49□□□□□ -0.09
USP42-204ENST00000451154 RPL37P61927 97 aaKnown RBP14.47□□□□□ -0.09
USP42-204ENST00000451154 TCL1BO95988 128 aa14.46□□□□□ -0.09
USP42-204ENST00000451154 CFC1BP0CG36 223 aa14.45□□□□□ -0.1
USP42-204ENST00000451154 VAMP3Q15836 100 aa14.43□□□□□ -0.1
USP42-204ENST00000451154 F8WEM9 126 aa14.41□□□□□ -0.1
USP42-204ENST00000451154 SNRPEP62304 92 aaKnown RBP14.41□□□□□ -0.1
USP42-204ENST00000451154 LINC00575Q6W349 94 aa14.41□□□□□ -0.1
USP42-204ENST00000451154 LORP23490 312 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms