RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 PET117Q6UWS5 81 aa11.12□□□□□ -0.63
USP40-207ENST00000450940 ERC2-IT1O76042 136 aa11.11□□□□□ -0.63
USP40-207ENST00000450940 S100A7L2Q5SY68 101 aa11.11□□□□□ -0.63
USP40-207ENST00000450940 Q6ZRX8 168 aa11.11□□□□□ -0.63
USP40-207ENST00000450940 Q9BRP9 147 aa11.11□□□□□ -0.63
USP40-207ENST00000450940 TPRXLQ17RH7 258 aa11.1□□□□□ -0.63
USP40-207ENST00000450940 COA6Q5JTJ3 125 aaKnown RBP11.1□□□□□ -0.63
USP40-207ENST00000450940 LITAFQ99732 161 aa11.1□□□□□ -0.63
USP40-207ENST00000450940 PPDPFQ9H3Y8 114 aa11.1□□□□□ -0.63
USP40-207ENST00000450940 A6NJY4 79 aa11.09□□□□□ -0.63
USP40-207ENST00000450940 TIMM17BO60830 172 aa11.09□□□□□ -0.63
USP40-207ENST00000450940 S100A6P06703 90 aa11.09□□□□□ -0.63
USP40-207ENST00000450940 IGLV7-46A0A075B6I9 117 aa11.08□□□□□ -0.64
USP40-207ENST00000450940 Q8NBF4 154 aa11.08□□□□□ -0.64
USP40-207ENST00000450940 TRAV23DV6A0A075B6W5 121 aa11.07□□□□□ -0.64
USP40-207ENST00000450940 NPC2P61916 151 aa11.07□□□□□ -0.64
USP40-207ENST00000450940 GAGE2AQ6NT46 116 aa11.07□□□□□ -0.64
USP40-207ENST00000450940 LOC105371267A0A1B0GV96 52 aa11.06□□□□□ -0.64
USP40-207ENST00000450940 C3orf79P0CE67 100 aa11.06□□□□□ -0.64
USP40-207ENST00000450940 LINC00308Q8TCZ7 52 aa11.06□□□□□ -0.64
USP40-207ENST00000450940 ZNF73O43830 326 aaPredicted RBP11.05□□□□□ -0.64
USP40-207ENST00000450940 JOSD1Q15040 202 aaPredicted RBP11.05□□□□□ -0.64
USP40-207ENST00000450940 SPINK1P00995 79 aa11.04□□□□□ -0.64
USP40-207ENST00000450940 SSBP3-AS1Q7Z2R9 100 aa11.04□□□□□ -0.64
USP40-207ENST00000450940 SPANXCQ9NY87 97 aa11.04□□□□□ -0.64
USP40-207ENST00000450940 CBY1Q9Y3M2 126 aa11.04□□□□□ -0.64
USP40-207ENST00000450940 FP248Q71RG6 208 aaPredicted RBP11.03□□□□□ -0.64
USP40-207ENST00000450940 ZNF815PA8K554 130 aa11.02□□□□□ -0.65
USP40-207ENST00000450940 LCE2AQ5TA79 106 aaPredicted RBP11.02□□□□□ -0.65
USP40-207ENST00000450940 LCE2CQ5TA81 110 aa11.02□□□□□ -0.65
USP40-207ENST00000450940 C5orf52A6NGY3 159 aa11.01□□□□□ -0.65
USP40-207ENST00000450940 CDIP1Q9H305 208 aa11.01□□□□□ -0.65
USP40-207ENST00000450940 TTTY13Q9BZ97 58 aa11□□□□□ -0.65
USP40-207ENST00000450940 RPS29P62273 56 aaKnown RBP10.99□□□□□ -0.65
USP40-207ENST00000450940 MOBPQ13875 183 aa10.99□□□□□ -0.65
USP40-207ENST00000450940 MUC17Q685J3 4493 aa10.99□□□□□ -0.65
USP40-207ENST00000450940 IGLV9-49A0A0B4J1Y8 123 aa10.98□□□□□ -0.65
USP40-207ENST00000450940 KRTDAPP60985 99 aa10.98□□□□□ -0.65
USP40-207ENST00000450940 SNRPEP62304 92 aaKnown RBP10.98□□□□□ -0.65
USP40-207ENST00000450940 HINT1P49773 126 aaPredicted RBP10.97□□□□□ -0.65
USP40-207ENST00000450940 SPANXDQ9BXN6 97 aa10.97□□□□□ -0.65
USP40-207ENST00000450940 LINC00518Q8N0U6 118 aa10.96□□□□□ -0.65
USP40-207ENST00000450940 OR13C6PQ8NH95 151 aa10.95□□□□□ -0.66
USP40-207ENST00000450940 A0A0U1RQV1 116 aa10.94□□□□□ -0.66
USP40-207ENST00000450940 C20orf202A1L168 122 aa10.94□□□□□ -0.66
USP40-207ENST00000450940 ST20-AS1Q8NBB2 130 aa10.94□□□□□ -0.66
USP40-207ENST00000450940 SPRR1BP22528 89 aa10.93□□□□□ -0.66
USP40-207ENST00000450940 KRTAP13-3Q3SY46 172 aa10.93□□□□□ -0.66
USP40-207ENST00000450940 ANKRD39Q53RE8 183 aa10.93□□□□□ -0.66
USP40-207ENST00000450940 Q8N377 158 aa10.92□□□□□ -0.66
USP40-207ENST00000450940 DHRS4-AS1Q9P1J3 65 aa10.92□□□□□ -0.66
USP40-207ENST00000450940 S100A2P29034 98 aa10.91□□□□□ -0.66
USP40-207ENST00000450940 AKR1D1P51857 326 aa10.91□□□□□ -0.66
USP40-207ENST00000450940 SCGB1D4Q6XE38 83 aa10.9□□□□□ -0.66
USP40-207ENST00000450940 IFITM1P13164 125 aa10.89□□□□□ -0.67
USP40-207ENST00000450940 ELOF1P60002 83 aaKnown RBP10.89□□□□□ -0.67
USP40-207ENST00000450940 Q6ZVH6 145 aa10.89□□□□□ -0.67
USP40-207ENST00000450940 SLC25A20O43772 301 aa10.88□□□□□ -0.67
USP40-207ENST00000450940 COPS9Q8WXC6 57 aa10.88□□□□□ -0.67
USP40-207ENST00000450940 FAT4Q6V0I7 4981 aa10.87□□□□□ -0.67
USP40-207ENST00000450940 TRBV7-6A0A0J9YX20 115 aa10.87□□□□□ -0.67
USP40-207ENST00000450940 COX7BP24311 80 aa10.87□□□□□ -0.67
USP40-207ENST00000450940 C6orf99Q4VX62 202 aa10.87□□□□□ -0.67
USP40-207ENST00000450940 C9orf153Q5TBE3 101 aa10.87□□□□□ -0.67
USP40-207ENST00000450940 ATOH7Q8N100 152 aa10.87□□□□□ -0.67
USP40-207ENST00000450940 HIST3H2BBQ8N257 126 aa10.87□□□□□ -0.67
USP40-207ENST00000450940 PCP2Q8IVA1 136 aa10.86□□□□□ -0.67
USP40-207ENST00000450940 SLC25A34Q6PIV7 304 aa10.85□□□□□ -0.67
USP40-207ENST00000450940 SMIM6P0DI80 62 aa10.83□□□□□ -0.68
USP40-207ENST00000450940 MUSTN1Q8IVN3 82 aa10.83□□□□□ -0.68
USP40-207ENST00000450940 ASB16-AS1Q495Z4 193 aa10.81□□□□□ -0.68
USP40-207ENST00000450940 HIST1H2BLQ99880 126 aa10.81□□□□□ -0.68
USP40-207ENST00000450940 LAMTOR3Q9UHA4 124 aa10.81□□□□□ -0.68
USP40-207ENST00000450940 A0A1B0GWB2 263 aa10.79□□□□□ -0.68
USP40-207ENST00000450940 A6NDN8 102 aa10.78□□□□□ -0.68
USP40-207ENST00000450940 TAL2Q16559 108 aa10.78□□□□□ -0.68
USP40-207ENST00000450940 TEX49A0A1B0GTD5 131 aa10.77□□□□□ -0.69
USP40-207ENST00000450940 IGLV5-48A0A075B6I7 105 aa10.75□□□□□ -0.69
USP40-207ENST00000450940 TRAV13-2A0A0B4J235 113 aa10.75□□□□□ -0.69
USP40-207ENST00000450940 A4D1N5 150 aa10.75□□□□□ -0.69
USP40-207ENST00000450940 LINC01547P58512 204 aaPredicted RBP10.75□□□□□ -0.69
USP40-207ENST00000450940 CD164Q04900 197 aa10.74□□□□□ -0.69
USP40-207ENST00000450940 SMIM29Q86T20 159 aa10.74□□□□□ -0.69
USP40-207ENST00000450940 DEFB105AQ8NG35 78 aa10.74□□□□□ -0.69
USP40-207ENST00000450940 C12orf57Q99622 126 aa10.74□□□□□ -0.69
USP40-207ENST00000450940 LIMD2Q9BT23 127 aa10.74□□□□□ -0.69
USP40-207ENST00000450940 SEC61BP60468 96 aaKnown RBP10.73□□□□□ -0.69
USP40-207ENST00000450940 XP32Q5T750 250 aa10.73□□□□□ -0.69
USP40-207ENST00000450940 LORP23490 312 aaPredicted RBP10.72□□□□□ -0.69
USP40-207ENST00000450940 Q1RN00 199 aa10.72□□□□□ -0.69
USP40-207ENST00000450940 SMIM11BQ8TCY0 68 aa10.72□□□□□ -0.69
USP40-207ENST00000450940 PRO1933Q9H354 126 aa10.72□□□□□ -0.69
USP40-207ENST00000450940 HRCT1Q6UXD1 115 aa10.7□□□□□ -0.7
USP40-207ENST00000450940 HSBP1L1C9JCN9 74 aa10.69□□□□□ -0.7
USP40-207ENST00000450940 PYY3Q5JQD4 70 aa10.68□□□□□ -0.7
USP40-207ENST00000450940 KRTAP4-1Q9BYQ7 146 aa10.68□□□□□ -0.7
USP40-207ENST00000450940 NHP2Q9NX24 153 aaKnown RBP10.68□□□□□ -0.7
USP40-207ENST00000450940 Q5XG85 94 aa10.67□□□□□ -0.7
USP40-207ENST00000450940 H7C2G1 150 aa10.65□□□□□ -0.7
USP40-207ENST00000450940 SCGB1D1O95968 90 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms