RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 PHF5AQ7RTV0 110 aaKnown RBP9.29□□□□□ -0.92
ITGB4-202ENST00000449880 RPL37AP61513 92 aaKnown RBP9.28□□□□□ -0.92
ITGB4-202ENST00000449880 IGLV1-50A0A075B6I6 118 aa9.27□□□□□ -0.92
ITGB4-202ENST00000449880 EPM2AB3EWF7 344 aa9.27□□□□□ -0.92
ITGB4-202ENST00000449880 WWC2-AS2Q96NR7 200 aa9.27□□□□□ -0.93
ITGB4-202ENST00000449880 CDC42SE1Q9NRR8 79 aa9.27□□□□□ -0.93
ITGB4-202ENST00000449880 Q8NAQ8 132 aa9.27□□□□□ -0.93
ITGB4-202ENST00000449880 F8P00451 2351 aa9.27□□□□□ -0.93
ITGB4-202ENST00000449880 LINC00313P59037 77 aa9.27□□□□□ -0.93
ITGB4-202ENST00000449880 LINC00588Q9Y4M8 146 aa9.26□□□□□ -0.93
ITGB4-202ENST00000449880 PLA2G2DQ9UNK4 145 aa9.25□□□□□ -0.93
ITGB4-202ENST00000449880 POLQO75417 2590 aa9.25□□□□□ -0.93
ITGB4-202ENST00000449880 MTORP42345 2549 aa9.23□□□□□ -0.93
ITGB4-202ENST00000449880 PLA2G1BP04054 148 aaKnown RBP9.23□□□□□ -0.93
ITGB4-202ENST00000449880 MIR22HGQ0VDD5 57 aa9.23□□□□□ -0.93
ITGB4-202ENST00000449880 FASNP49327 2511 aaKnown RBP9.23□□□□□ -0.93
ITGB4-202ENST00000449880 PRR34Q9NV39 138 aa9.22□□□□□ -0.93
ITGB4-202ENST00000449880 IGFL1Q6UW32 110 aa9.22□□□□□ -0.93
ITGB4-202ENST00000449880 C9orf129Q5T035 196 aaKnown RBP9.21□□□□□ -0.93
ITGB4-202ENST00000449880 CSNK1G2-AS1Q8NCQ2 148 aa9.21□□□□□ -0.93
ITGB4-202ENST00000449880 Q8N377 158 aa9.21□□□□□ -0.93
ITGB4-202ENST00000449880 KRTAP1-3Q8IUG1 177 aa9.2□□□□□ -0.94
ITGB4-202ENST00000449880 DNAH10OSP0CZ25 163 aa9.2□□□□□ -0.94
ITGB4-202ENST00000449880 Q5XG85 94 aa9.2□□□□□ -0.94
ITGB4-202ENST00000449880 C8orf17Q9NRJ1 99 aa9.2□□□□□ -0.94
ITGB4-202ENST00000449880 CHTF8P0CG12 524 aa9.2□□□□□ -0.94
ITGB4-202ENST00000449880 CDH23Q9H251 3354 aa9.19□□□□□ -0.94
ITGB4-202ENST00000449880 UNC80Q8N2C7 3258 aa9.19□□□□□ -0.94
ITGB4-202ENST00000449880 TLX1NBP0CAT3 122 aa9.19□□□□□ -0.94
ITGB4-202ENST00000449880 SPINT4Q6UDR6 99 aa9.19□□□□□ -0.94
ITGB4-202ENST00000449880 OCR1Q9BZK8 76 aa9.18□□□□□ -0.94
ITGB4-202ENST00000449880 LINC00612Q8N6U2 182 aa9.17□□□□□ -0.94
ITGB4-202ENST00000449880 LAMA2P24043 3122 aaKnown RBP9.17□□□□□ -0.94
ITGB4-202ENST00000449880 J3QL48 77 aa9.17□□□□□ -0.94
ITGB4-202ENST00000449880 Q96NJ1 140 aa9.16□□□□□ -0.94
ITGB4-202ENST00000449880 KRTAP10-3P60369 221 aa9.15□□□□□ -0.94
ITGB4-202ENST00000449880 A0A1B0GVX0 72 aa9.15□□□□□ -0.95
ITGB4-202ENST00000449880 C19orf73Q9NVV2 129 aa9.14□□□□□ -0.95
ITGB4-202ENST00000449880 GIG44P09565 113 aaPredicted RBP9.14□□□□□ -0.95
ITGB4-202ENST00000449880 IGLV5-48A0A075B6I7 105 aa9.14□□□□□ -0.95
ITGB4-202ENST00000449880 PRUNE2Q8WUY3 3088 aa9.12□□□□□ -0.95
ITGB4-202ENST00000449880 C15orf56Q8N910 161 aa9.11□□□□□ -0.95
ITGB4-202ENST00000449880 Q75L30 129 aa9.11□□□□□ -0.95
ITGB4-202ENST00000449880 ZNF575Q86XF7 245 aa9.11□□□□□ -0.95
ITGB4-202ENST00000449880 KRTAP1-1Q07627 177 aa9.1□□□□□ -0.95
ITGB4-202ENST00000449880 A0A1W2PNM2 257 aa9.09□□□□□ -0.95
ITGB4-202ENST00000449880 FAM168BA1KXE4 195 aa9.09□□□□□ -0.95
ITGB4-202ENST00000449880 ACANP16112 2415 aa9.08□□□□□ -0.96
ITGB4-202ENST00000449880 IGLV8-61A0A075B6I0 122 aa9.07□□□□□ -0.96
ITGB4-202ENST00000449880 A0A0C4DFX4 3053 aa9.06□□□□□ -0.96
ITGB4-202ENST00000449880 IGLV5-37A0A075B6J1 123 aa9.06□□□□□ -0.96
ITGB4-202ENST00000449880 SSBP3-AS1Q7Z2R9 100 aa9.06□□□□□ -0.96
ITGB4-202ENST00000449880 EPG5Q9HCE0 2579 aa9.05□□□□□ -0.96
ITGB4-202ENST00000449880 KRTAP10-11P60412 298 aa9.05□□□□□ -0.96
ITGB4-202ENST00000449880 COX6B2Q6YFQ2 88 aa9.05□□□□□ -0.96
ITGB4-202ENST00000449880 K7EIL1 84 aa9.04□□□□□ -0.96
ITGB4-202ENST00000449880 RBM12B-AS1Q9P1G2 102 aa9.04□□□□□ -0.96
ITGB4-202ENST00000449880 SPRR4Q96PI1 79 aa9.03□□□□□ -0.96
ITGB4-202ENST00000449880 FP248Q71RG6 208 aaPredicted RBP9.03□□□□□ -0.96
ITGB4-202ENST00000449880 IGLV7-46A0A075B6I9 117 aa9.02□□□□□ -0.97
ITGB4-202ENST00000449880 LINC00304Q8N9R0 145 aa9.01□□□□□ -0.97
ITGB4-202ENST00000449880 SZT2Q5T011 3432 aa9.01□□□□□ -0.97
ITGB4-202ENST00000449880 ZNF861PO60384 105 aa9□□□□□ -0.97
ITGB4-202ENST00000449880 CRIPTQ9P021 101 aa9□□□□□ -0.97
ITGB4-202ENST00000449880 FAM104AQ969W3 186 aa9□□□□□ -0.97
ITGB4-202ENST00000449880 ZNF292O60281 2723 aa8.98□□□□□ -0.97
ITGB4-202ENST00000449880 LINC01558Q9Y6Z2 57 aa8.98□□□□□ -0.97
ITGB4-202ENST00000449880 TRIOO75962 3097 aa8.96□□□□□ -0.97
ITGB4-202ENST00000449880 A0A087WTM6 91 aa8.96□□□□□ -0.97
ITGB4-202ENST00000449880 DSCR10P59022 87 aa8.96□□□□□ -0.97
ITGB4-202ENST00000449880 CYSTM1Q9H1C7 97 aa8.95□□□□□ -0.98
ITGB4-202ENST00000449880 C9orf163Q8N9P6 203 aa8.95□□□□□ -0.98
ITGB4-202ENST00000449880 MGAQ8IWI9 3026 aa8.95□□□□□ -0.98
ITGB4-202ENST00000449880 XIRP2A4UGR9 3374 aa8.95□□□□□ -0.98
ITGB4-202ENST00000449880 FAM229BQ4G0N7 80 aa8.93□□□□□ -0.98
ITGB4-202ENST00000449880 Q8N9P0 234 aaPredicted RBP8.93□□□□□ -0.98
ITGB4-202ENST00000449880 CFAP54Q96N23 3096 aa8.92□□□□□ -0.98
ITGB4-202ENST00000449880 LINC01554Q52M75 96 aa8.91□□□□□ -0.98
ITGB4-202ENST00000449880 CNBPP62633 177 aaKnown RBP8.9□□□□□ -0.98
ITGB4-202ENST00000449880 DNAH14Q0VDD8 3507 aa8.9□□□□□ -0.98
ITGB4-202ENST00000449880 AKAP13Q12802 2813 aa8.89□□□□□ -0.99
ITGB4-202ENST00000449880 IGLV7-43P04211 117 aa8.87□□□□□ -0.99
ITGB4-202ENST00000449880 Q5VV11 94 aa8.87□□□□□ -0.99
ITGB4-202ENST00000449880 WDFY4Q6ZS81 3184 aa8.87□□□□□ -0.99
ITGB4-202ENST00000449880 C9orf92A6NGG3 77 aa8.87□□□□□ -0.99
ITGB4-202ENST00000449880 SMR3BP02814 79 aaPredicted RBP8.86□□□□□ -0.99
ITGB4-202ENST00000449880 OXTP01178 125 aa8.86□□□□□ -0.99
ITGB4-202ENST00000449880 CR1P17927 2039 aa8.86□□□□□ -0.99
ITGB4-202ENST00000449880 APLNQ9ULZ1 77 aa8.85□□□□□ -0.99
ITGB4-202ENST00000449880 A0A0G2JQZ4 141 aa8.85□□□□□ -0.99
ITGB4-202ENST00000449880 A0A1W2PNN7 141 aa8.85□□□□□ -0.99
ITGB4-202ENST00000449880 FLNBO75369 2602 aaKnown RBP8.83□□□□□ -1
ITGB4-202ENST00000449880 LAMA1P25391 3075 aa8.83□□□□□ -1
ITGB4-202ENST00000449880 HECTD1Q9ULT8 2610 aa8.82□□□□□ -1
ITGB4-202ENST00000449880 PSORS1C2Q9UIG4 136 aa8.82□□□□□ -1
ITGB4-202ENST00000449880 SPTBN5Q9NRC6 3674 aaKnown RBP8.8□□□□□ -1
ITGB4-202ENST00000449880 FLNAP21333 2647 aaKnown RBP8.8□□□□□ -1
ITGB4-202ENST00000449880 MGAM2Q2M2H8 2515 aa8.8□□□□□ -1
ITGB4-202ENST00000449880 PRR26Q8N8Z3 221 aa8.8□□□□□ -1
ITGB4-202ENST00000449880 ASB16-AS1Q495Z4 193 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms