RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 LINC01600Q96MT4 127 aa8.35□□□□□ -1.07
AC006001.3-201ENST00000449307 C9orf163Q8N9P6 203 aa8.35□□□□□ -1.07
AC006001.3-201ENST00000449307 H3BPC8 53 aa8.34□□□□□ -1.07
AC006001.3-201ENST00000449307 LOC110117498A0A087WWA1 95 aa8.34□□□□□ -1.07
AC006001.3-201ENST00000449307 SETD2Q9BYW2 2564 aaPredicted RBP8.34□□□□□ -1.07
AC006001.3-201ENST00000449307 C9orf129Q5T035 196 aaKnown RBP8.34□□□□□ -1.07
AC006001.3-201ENST00000449307 ZNF575Q86XF7 245 aa8.33□□□□□ -1.08
AC006001.3-201ENST00000449307 POLQO75417 2590 aa8.33□□□□□ -1.08
AC006001.3-201ENST00000449307 A0A096LNT2 108 aa8.33□□□□□ -1.08
AC006001.3-201ENST00000449307 C8orf17Q9NRJ1 99 aa8.32□□□□□ -1.08
AC006001.3-201ENST00000449307 IGLV7-46A0A075B6I9 117 aa8.32□□□□□ -1.08
AC006001.3-201ENST00000449307 KCNQ1DNQ9H478 68 aa8.32□□□□□ -1.08
AC006001.3-201ENST00000449307 A0A0D9SG42 100 aa8.31□□□□□ -1.08
AC006001.3-201ENST00000449307 CENPFP49454 3210 aa8.31□□□□□ -1.08
AC006001.3-201ENST00000449307 A0A1B0GVX0 72 aa8.3□□□□□ -1.08
AC006001.3-201ENST00000449307 ACANP16112 2415 aa8.3□□□□□ -1.08
AC006001.3-201ENST00000449307 KRTAP1-3Q8IUG1 177 aa8.29□□□□□ -1.08
AC006001.3-201ENST00000449307 CRIPTQ9P021 101 aa8.29□□□□□ -1.08
AC006001.3-201ENST00000449307 MTORP42345 2549 aa8.28□□□□□ -1.08
AC006001.3-201ENST00000449307 Q8N1X5 172 aa8.26□□□□□ -1.09
AC006001.3-201ENST00000449307 LINC00612Q8N6U2 182 aa8.26□□□□□ -1.09
AC006001.3-201ENST00000449307 PRR26Q8N8Z3 221 aa8.26□□□□□ -1.09
AC006001.3-201ENST00000449307 PKD1L2Q7Z442 2459 aa8.26□□□□□ -1.09
AC006001.3-201ENST00000449307 PRR34Q9NV39 138 aa8.25□□□□□ -1.09
AC006001.3-201ENST00000449307 GIG44P09565 113 aaPredicted RBP8.25□□□□□ -1.09
AC006001.3-201ENST00000449307 SPRR4Q96PI1 79 aa8.24□□□□□ -1.09
AC006001.3-201ENST00000449307 COA5Q86WW8 74 aa8.24□□□□□ -1.09
AC006001.3-201ENST00000449307 IGLV5-48A0A075B6I7 105 aa8.24□□□□□ -1.09
AC006001.3-201ENST00000449307 KRTAP1-1Q07627 177 aa8.23□□□□□ -1.09
AC006001.3-201ENST00000449307 CEP295Q9C0D2 2601 aa8.22□□□□□ -1.09
AC006001.3-201ENST00000449307 PRR15Q8IV56 129 aa8.22□□□□□ -1.09
AC006001.3-201ENST00000449307 Q8N377 158 aa8.21□□□□□ -1.1
AC006001.3-201ENST00000449307 USP9YO00507 2555 aaPredicted RBP8.21□□□□□ -1.1
AC006001.3-201ENST00000449307 TLX1NBP0CAT3 122 aa8.2□□□□□ -1.1
AC006001.3-201ENST00000449307 GOLGB1Q14789 3259 aaKnown RBP8.2□□□□□ -1.1
AC006001.3-201ENST00000449307 CNBPP62633 177 aaKnown RBP8.19□□□□□ -1.1
AC006001.3-201ENST00000449307 UQCR11O14957 56 aa8.18□□□□□ -1.1
AC006001.3-201ENST00000449307 PLA2G2DQ9UNK4 145 aa8.18□□□□□ -1.1
AC006001.3-201ENST00000449307 CAMK2N1Q7Z7J9 78 aa8.17□□□□□ -1.1
AC006001.3-201ENST00000449307 ERC2-IT1O76042 136 aa8.16□□□□□ -1.1
AC006001.3-201ENST00000449307 RPS28P62857 69 aaKnown RBP8.16□□□□□ -1.1
AC006001.3-201ENST00000449307 SMCPP49901 116 aaPredicted RBP8.15□□□□□ -1.1
AC006001.3-201ENST00000449307 MIR22HGQ0VDD5 57 aa8.15□□□□□ -1.11
AC006001.3-201ENST00000449307 KLK9Q2XQG4 91 aa8.14□□□□□ -1.11
AC006001.3-201ENST00000449307 LITAFQ99732 161 aa8.13□□□□□ -1.11
AC006001.3-201ENST00000449307 Q5VSD8 79 aa8.13□□□□□ -1.11
AC006001.3-201ENST00000449307 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.13□□□□□ -1.11
AC006001.3-201ENST00000449307 CD164Q04900 197 aa8.09□□□□□ -1.11
AC006001.3-201ENST00000449307 A8MUN3 132 aa8.08□□□□□ -1.12
AC006001.3-201ENST00000449307 FAM104AQ969W3 186 aa8.07□□□□□ -1.12
AC006001.3-201ENST00000449307 EIF4EBP3O60516 100 aaPredicted RBP8.04□□□□□ -1.12
AC006001.3-201ENST00000449307 CDC42SE1Q9NRR8 79 aa8.04□□□□□ -1.12
AC006001.3-201ENST00000449307 LCE6AA0A183 80 aa8.01□□□□□ -1.13
AC006001.3-201ENST00000449307 SEC61BP60468 96 aaKnown RBP8.01□□□□□ -1.13
AC006001.3-201ENST00000449307 PRO0461Q9UI25 63 aa8□□□□□ -1.13
AC006001.3-201ENST00000449307 HECTD1Q9ULT8 2610 aa8□□□□□ -1.13
AC006001.3-201ENST00000449307 USP24Q9UPU5 2620 aa8□□□□□ -1.13
AC006001.3-201ENST00000449307 KTN1-AS1Q86SY8 53 aa8□□□□□ -1.13
AC006001.3-201ENST00000449307 S4R3F8 94 aa8□□□□□ -1.13
AC006001.3-201ENST00000449307 H3BS24 57 aa7.99□□□□□ -1.13
AC006001.3-201ENST00000449307 LINC00483Q53H64 154 aa7.97□□□□□ -1.13
AC006001.3-201ENST00000449307 HRES1P13985 223 aa7.97□□□□□ -1.13
AC006001.3-201ENST00000449307 A0A1W2PNM2 257 aa7.96□□□□□ -1.14
AC006001.3-201ENST00000449307 LCA10Q71F78 164 aa7.96□□□□□ -1.14
AC006001.3-201ENST00000449307 CR1P17927 2039 aa7.96□□□□□ -1.14
AC006001.3-201ENST00000449307 EPG5Q9HCE0 2579 aa7.94□□□□□ -1.14
AC006001.3-201ENST00000449307 CSAG1Q6PB30 78 aa7.94□□□□□ -1.14
AC006001.3-201ENST00000449307 BPTFQ12830 3046 aa7.94□□□□□ -1.14
AC006001.3-201ENST00000449307 CYP4F30PQ9H0H9 118 aa7.94□□□□□ -1.14
AC006001.3-201ENST00000449307 FLNBO75369 2602 aaKnown RBP7.94□□□□□ -1.14
AC006001.3-201ENST00000449307 MGAM2Q2M2H8 2515 aa7.94□□□□□ -1.14
AC006001.3-201ENST00000449307 FAM229BQ4G0N7 80 aa7.93□□□□□ -1.14
AC006001.3-201ENST00000449307 PLAC8Q9NZF1 115 aa7.93□□□□□ -1.14
AC006001.3-201ENST00000449307 LUZP6Q538Z0 58 aa7.91□□□□□ -1.14
AC006001.3-201ENST00000449307 ZCCHC13Q8WW36 166 aaKnown RBP7.88□□□□□ -1.15
AC006001.3-201ENST00000449307 KRTAP10-1P60331 282 aa7.87□□□□□ -1.15
AC006001.3-201ENST00000449307 KRTAP10-2P60368 255 aa7.86□□□□□ -1.15
AC006001.3-201ENST00000449307 R4GN34 69 aa7.85□□□□□ -1.15
AC006001.3-201ENST00000449307 UTRNP46939 3433 aa7.84□□□□□ -1.15
AC006001.3-201ENST00000449307 WIPF1O43516 503 aa7.83□□□□□ -1.16
AC006001.3-201ENST00000449307 OXTP01178 125 aa7.83□□□□□ -1.16
AC006001.3-201ENST00000449307 A0A1B0GU33 70 aa7.82□□□□□ -1.16
AC006001.3-201ENST00000449307 PLAC4Q8WY50 150 aa7.8□□□□□ -1.16
AC006001.3-201ENST00000449307 SPINK7P58062 85 aa7.78□□□□□ -1.16
AC006001.3-201ENST00000449307 DNAH12Q6ZR08 3092 aa7.78□□□□□ -1.16
AC006001.3-201ENST00000449307 Q1T7F1 81 aa7.75□□□□□ -1.17
AC006001.3-201ENST00000449307 SPANXA2-OT1Q8N9U9 137 aa7.75□□□□□ -1.17
AC006001.3-201ENST00000449307 KRTAP1-5Q9BYS1 174 aa7.75□□□□□ -1.17
AC006001.3-201ENST00000449307 HELZ2Q9BYK8 2649 aaKnown RBP7.74□□□□□ -1.17
AC006001.3-201ENST00000449307 H7BZZ5 65 aa7.74□□□□□ -1.17
AC006001.3-201ENST00000449307 KLKP1Q107X0 134 aa7.74□□□□□ -1.17
AC006001.3-201ENST00000449307 ITPR3Q14573 2671 aa7.73□□□□□ -1.17
AC006001.3-201ENST00000449307 FLNAP21333 2647 aaKnown RBP7.72□□□□□ -1.17
AC006001.3-201ENST00000449307 Q8N9P0 234 aaPredicted RBP7.71□□□□□ -1.18
AC006001.3-201ENST00000449307 M0QZ58 72 aa7.7□□□□□ -1.18
AC006001.3-201ENST00000449307 C5orf42Q9H799 3197 aa7.69□□□□□ -1.18
AC006001.3-201ENST00000449307 DMAC1Q96GE9 116 aa7.68□□□□□ -1.18
AC006001.3-201ENST00000449307 PRAC1Q96KF2 57 aa7.67□□□□□ -1.18
AC006001.3-201ENST00000449307 CEP350Q5VT06 3117 aa7.67□□□□□ -1.18
AC006001.3-201ENST00000449307 Q5W150 140 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms