RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 UBE2BP63146 152 aa12□□□□□ -0.49
RPS28-202ENST00000449223 KRTAP11-1Q8IUC1 163 aa12□□□□□ -0.49
RPS28-202ENST00000449223 C6orf99Q4VX62 202 aa11.99□□□□□ -0.49
RPS28-202ENST00000449223 DIRC1Q969H9 104 aa11.99□□□□□ -0.49
RPS28-202ENST00000449223 REG3GQ6UW15 175 aa11.98□□□□□ -0.49
RPS28-202ENST00000449223 NAA38Q9BRA0 125 aaKnown RBP11.98□□□□□ -0.49
RPS28-202ENST00000449223 A0A1W2PPM0 123 aa11.97□□□□□ -0.49
RPS28-202ENST00000449223 COX6CP09669 75 aa11.97□□□□□ -0.49
RPS28-202ENST00000449223 PSMB2P49721 201 aa11.97□□□□□ -0.49
RPS28-202ENST00000449223 XGP55808 180 aa11.96□□□□□ -0.49
RPS28-202ENST00000449223 LYRM7Q5U5X0 104 aa11.96□□□□□ -0.5
RPS28-202ENST00000449223 APOBP04114 4563 aaKnown RBP11.95□□□□□ -0.5
RPS28-202ENST00000449223 H0YGX0 51 aa11.95□□□□□ -0.5
RPS28-202ENST00000449223 ELOF1P60002 83 aaKnown RBP11.95□□□□□ -0.5
RPS28-202ENST00000449223 VAMP3Q15836 100 aa11.94□□□□□ -0.5
RPS28-202ENST00000449223 FABP2P12104 132 aa11.92□□□□□ -0.5
RPS28-202ENST00000449223 HAMPP81172 84 aa11.92□□□□□ -0.5
RPS28-202ENST00000449223 B5MCH6 92 aa11.91□□□□□ -0.5
RPS28-202ENST00000449223 Q6ZRX8 168 aa11.91□□□□□ -0.5
RPS28-202ENST00000449223 PSORS1C2Q9UIG4 136 aa11.91□□□□□ -0.5
RPS28-202ENST00000449223 BCE1O60756 84 aa11.91□□□□□ -0.5
RPS28-202ENST00000449223 SCGB1C2P0DMR2 95 aa11.91□□□□□ -0.5
RPS28-202ENST00000449223 COX7BP24311 80 aa11.91□□□□□ -0.5
RPS28-202ENST00000449223 LINC00528Q8N1L1 170 aa11.91□□□□□ -0.5
RPS28-202ENST00000449223 ETDCA0A1B0GVM5 59 aa11.9□□□□□ -0.5
RPS28-202ENST00000449223 H0Y9J4 135 aa11.9□□□□□ -0.5
RPS28-202ENST00000449223 CDK2AP2O75956 126 aa11.9□□□□□ -0.5
RPS28-202ENST00000449223 TRBV20-1A0A075B6N2 111 aa11.89□□□□□ -0.51
RPS28-202ENST00000449223 A0A1B0GX51 115 aa11.88□□□□□ -0.51
RPS28-202ENST00000449223 LST1O00453 97 aa11.87□□□□□ -0.51
RPS28-202ENST00000449223 LINC00575Q6W349 94 aa11.87□□□□□ -0.51
RPS28-202ENST00000449223 KRTAP13-1Q8IUC0 172 aa11.87□□□□□ -0.51
RPS28-202ENST00000449223 CLEC2BQ92478 149 aa11.87□□□□□ -0.51
RPS28-202ENST00000449223 FAM218AQ96MZ4 157 aa11.87□□□□□ -0.51
RPS28-202ENST00000449223 EPPK1P58107 5090 aaKnown RBP11.87□□□□□ -0.51
RPS28-202ENST00000449223 TCL1BO95988 128 aa11.86□□□□□ -0.51
RPS28-202ENST00000449223 INAFM2P0DMQ5 153 aa11.86□□□□□ -0.51
RPS28-202ENST00000449223 FAM19A1Q7Z5A9 133 aa11.85□□□□□ -0.51
RPS28-202ENST00000449223 SPCS1Q9Y6A9 102 aa11.85□□□□□ -0.51
RPS28-202ENST00000449223 Q9BRP9 147 aa11.84□□□□□ -0.51
RPS28-202ENST00000449223 DHRS4-AS1Q9P1J3 65 aa11.84□□□□□ -0.51
RPS28-202ENST00000449223 TRACP01848 142 aa11.83□□□□□ -0.52
RPS28-202ENST00000449223 ATXN8Q156A1 80 aa11.83□□□□□ -0.52
RPS28-202ENST00000449223 C1orf137Q5JT78 98 aa11.83□□□□□ -0.52
RPS28-202ENST00000449223 K7EP34 96 aa11.82□□□□□ -0.52
RPS28-202ENST00000449223 PRLHP81277 87 aa11.81□□□□□ -0.52
RPS28-202ENST00000449223 A0A1B0GV90 55 aa11.81□□□□□ -0.52
RPS28-202ENST00000449223 hADV29S1A0JD25 119 aa11.81□□□□□ -0.52
RPS28-202ENST00000449223 SLC25A20O43772 301 aa11.81□□□□□ -0.52
RPS28-202ENST00000449223 SMCR5Q8TEV8 140 aa11.81□□□□□ -0.52
RPS28-202ENST00000449223 SNCGO76070 127 aa11.8□□□□□ -0.52
RPS28-202ENST00000449223 UBE2AP49459 152 aa11.8□□□□□ -0.52
RPS28-202ENST00000449223 IGLV7-43P04211 117 aa11.79□□□□□ -0.52
RPS28-202ENST00000449223 GTF2H5Q6ZYL4 71 aa11.79□□□□□ -0.52
RPS28-202ENST00000449223 VPS13BQ7Z7G8 4022 aa11.79□□□□□ -0.52
RPS28-202ENST00000449223 ZNF861PO60384 105 aa11.78□□□□□ -0.52
RPS28-202ENST00000449223 H3BMG7 143 aa11.76□□□□□ -0.53
RPS28-202ENST00000449223 DNAL4O96015 105 aa11.75□□□□□ -0.53
RPS28-202ENST00000449223 SMR3BP02814 79 aaPredicted RBP11.75□□□□□ -0.53
RPS28-202ENST00000449223 RPL37AP61513 92 aaKnown RBP11.75□□□□□ -0.53
RPS28-202ENST00000449223 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.75□□□□□ -0.53
RPS28-202ENST00000449223 HIGD2AQ9BW72 106 aa11.75□□□□□ -0.53
RPS28-202ENST00000449223 HSPG2P98160 4391 aa11.75□□□□□ -0.53
RPS28-202ENST00000449223 SRRM2Q9UQ35 2752 aaKnown RBP11.74□□□□□ -0.53
RPS28-202ENST00000449223 ERC2-IT1O76042 136 aa11.74□□□□□ -0.53
RPS28-202ENST00000449223 FAT1Q14517 4588 aa11.74□□□□□ -0.53
RPS28-202ENST00000449223 KRTAP10-4P60372 401 aaPredicted RBP11.73□□□□□ -0.53
RPS28-202ENST00000449223 RYR1P21817 5038 aa11.72□□□□□ -0.53
RPS28-202ENST00000449223 OCIAD2Q56VL3 154 aa11.72□□□□□ -0.53
RPS28-202ENST00000449223 Q6ZQY7 126 aa11.72□□□□□ -0.53
RPS28-202ENST00000449223 UBE2V1Q13404 147 aa11.7□□□□□ -0.54
RPS28-202ENST00000449223 KIAA1109Q2LD37 5005 aa11.7□□□□□ -0.54
RPS28-202ENST00000449223 IGLV5-48A0A075B6I7 105 aa11.7□□□□□ -0.54
RPS28-202ENST00000449223 ORMDL1Q9P0S3 153 aa11.69□□□□□ -0.54
RPS28-202ENST00000449223 C9JAW5 83 aa11.68□□□□□ -0.54
RPS28-202ENST00000449223 H3BQ85 93 aa11.68□□□□□ -0.54
RPS28-202ENST00000449223 GHRHP01286 108 aa11.68□□□□□ -0.54
RPS28-202ENST00000449223 LINC01547P58512 204 aaPredicted RBP11.68□□□□□ -0.54
RPS28-202ENST00000449223 PPDPFLQ8WWR9 84 aa11.68□□□□□ -0.54
RPS28-202ENST00000449223 LINC01600Q96MT4 127 aa11.68□□□□□ -0.54
RPS28-202ENST00000449223 PRO0461Q9UI25 63 aa11.68□□□□□ -0.54
RPS28-202ENST00000449223 FAM229AH3BQW9 127 aa11.66□□□□□ -0.54
RPS28-202ENST00000449223 H3BT86 120 aa11.65□□□□□ -0.54
RPS28-202ENST00000449223 ST20-AS1Q8NBB2 130 aa11.65□□□□□ -0.54
RPS28-202ENST00000449223 F8W1H4 67 aa11.64□□□□□ -0.55
RPS28-202ENST00000449223 TMEM256-PLSCR3K7ERE1 68 aa11.64□□□□□ -0.55
RPS28-202ENST00000449223 PLA2G1BP04054 148 aaKnown RBP11.64□□□□□ -0.55
RPS28-202ENST00000449223 SPRR1BP22528 89 aa11.64□□□□□ -0.55
RPS28-202ENST00000449223 ZNF706Q9Y5V0 76 aaPredicted RBP11.64□□□□□ -0.55
RPS28-202ENST00000449223 BAALC-AS2P0C853 105 aa11.63□□□□□ -0.55
RPS28-202ENST00000449223 SPINK6Q6UWN8 80 aa11.63□□□□□ -0.55
RPS28-202ENST00000449223 Q8N377 158 aa11.63□□□□□ -0.55
RPS28-202ENST00000449223 SPRR4Q96PI1 79 aa11.63□□□□□ -0.55
RPS28-202ENST00000449223 TEX49A0A1B0GTD5 131 aa11.62□□□□□ -0.55
RPS28-202ENST00000449223 SMCPP49901 116 aaPredicted RBP11.61□□□□□ -0.55
RPS28-202ENST00000449223 LINC00483Q53H64 154 aa11.61□□□□□ -0.55
RPS28-202ENST00000449223 MTURNQ8N3F0 131 aa11.61□□□□□ -0.55
RPS28-202ENST00000449223 ANKRD29Q8N6D5 301 aa11.61□□□□□ -0.55
RPS28-202ENST00000449223 Q5VSD8 79 aa11.6□□□□□ -0.55
RPS28-202ENST00000449223 Q8N1X5 172 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 184.4 ms