RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 RELNP78509 3460 aa6.98□□□□□ -1.29
LINC00342-202ENST00000448494 CREBBPQ92793 2442 aa6.98□□□□□ -1.29
LINC00342-202ENST00000448494 OXLD1Q5BKU9 147 aa6.98□□□□□ -1.29
LINC00342-202ENST00000448494 RETNLBQ9BQ08 111 aa6.98□□□□□ -1.29
LINC00342-202ENST00000448494 UTP20O75691 2785 aaKnown RBP6.98□□□□□ -1.29
LINC00342-202ENST00000448494 NOTCH2Q04721 2471 aa6.98□□□□□ -1.29
LINC00342-202ENST00000448494 LY6EQ16553 131 aa6.97□□□□□ -1.29
LINC00342-202ENST00000448494 LINC00476Q8WZB0 136 aa6.97□□□□□ -1.29
LINC00342-202ENST00000448494 CR1P17927 2039 aa6.97□□□□□ -1.29
LINC00342-202ENST00000448494 GVQW2A0A096LPI5 108 aaPredicted RBP6.97□□□□□ -1.29
LINC00342-202ENST00000448494 RTL8CO15255 209 aa6.97□□□□□ -1.29
LINC00342-202ENST00000448494 C11orf71Q6IPW1 123 aa6.97□□□□□ -1.29
LINC00342-202ENST00000448494 DNAJC9-AS1A6NH13 148 aa6.96□□□□□ -1.29
LINC00342-202ENST00000448494 UNQ6190/PRO20217Q6UXQ8 127 aa6.96□□□□□ -1.3
LINC00342-202ENST00000448494 CHCHD10Q8WYQ3 142 aaPredicted RBP6.96□□□□□ -1.3
LINC00342-202ENST00000448494 NOP10Q9NPE3 64 aaKnown RBP6.96□□□□□ -1.3
LINC00342-202ENST00000448494 B4DSR2 109 aa6.95□□□□□ -1.3
LINC00342-202ENST00000448494 DEFB112Q30KQ8 113 aa6.95□□□□□ -1.3
LINC00342-202ENST00000448494 Q8N377 158 aa6.95□□□□□ -1.3
LINC00342-202ENST00000448494 NBASA2RRP1 2371 aa6.95□□□□□ -1.3
LINC00342-202ENST00000448494 H3BUX3 64 aa6.94□□□□□ -1.3
LINC00342-202ENST00000448494 C1orf137Q5JT78 98 aa6.94□□□□□ -1.3
LINC00342-202ENST00000448494 CLPSL2Q6UWE3 100 aa6.94□□□□□ -1.3
LINC00342-202ENST00000448494 KRTAP29-1A8MX34 341 aaPredicted RBP6.94□□□□□ -1.3
LINC00342-202ENST00000448494 FBN2P35556 2912 aa6.93□□□□□ -1.3
LINC00342-202ENST00000448494 TNP2Q05952 138 aa6.93□□□□□ -1.3
LINC00342-202ENST00000448494 WFDC13Q8IUB5 93 aa6.93□□□□□ -1.3
LINC00342-202ENST00000448494 ITPR2Q14571 2701 aa6.93□□□□□ -1.3
LINC00342-202ENST00000448494 DOPEY1Q5JWR5 2465 aa6.93□□□□□ -1.3
LINC00342-202ENST00000448494 KRTAP21-3Q3LHN1 58 aa6.92□□□□□ -1.3
LINC00342-202ENST00000448494 BRD3OSQ6XYD6 125 aa6.92□□□□□ -1.3
LINC00342-202ENST00000448494 C16orf74Q96GX8 76 aa6.92□□□□□ -1.3
LINC00342-202ENST00000448494 ZNF706Q9Y5V0 76 aaPredicted RBP6.92□□□□□ -1.3
LINC00342-202ENST00000448494 C2CD3Q4AC94 2353 aa6.91□□□□□ -1.3
LINC00342-202ENST00000448494 WNK1Q9H4A3 2382 aa6.91□□□□□ -1.3
LINC00342-202ENST00000448494 IGLV1-51P01701 117 aa6.91□□□□□ -1.3
LINC00342-202ENST00000448494 ABCA12Q86UK0 2595 aa6.91□□□□□ -1.3
LINC00342-202ENST00000448494 ZNF702PQ9H963 129 aa6.9□□□□□ -1.3
LINC00342-202ENST00000448494 DEFB116Q30KQ4 102 aa6.9□□□□□ -1.31
LINC00342-202ENST00000448494 WFDC10BQ8IUB3 73 aa6.89□□□□□ -1.31
LINC00342-202ENST00000448494 DEFB105AQ8NG35 78 aa6.89□□□□□ -1.31
LINC00342-202ENST00000448494 IGLV1-50A0A075B6I6 118 aa6.89□□□□□ -1.31
LINC00342-202ENST00000448494 XAGE1AQ9HD64 81 aa6.89□□□□□ -1.31
LINC00342-202ENST00000448494 LRBAP50851 2863 aa6.87□□□□□ -1.31
LINC00342-202ENST00000448494 IGLV5-37A0A075B6J1 123 aa6.87□□□□□ -1.31
LINC00342-202ENST00000448494 REG3AQ06141 175 aa6.87□□□□□ -1.31
LINC00342-202ENST00000448494 C10orf99Q6UWK7 81 aa6.87□□□□□ -1.31
LINC00342-202ENST00000448494 C7orf33Q8WU49 177 aa6.87□□□□□ -1.31
LINC00342-202ENST00000448494 AKAP6Q13023 2319 aa6.86□□□□□ -1.31
LINC00342-202ENST00000448494 CELSR2Q9HCU4 2923 aa6.86□□□□□ -1.31
LINC00342-202ENST00000448494 IGLV10-54A0A075B6I4 117 aa6.86□□□□□ -1.31
LINC00342-202ENST00000448494 FBXL19-AS1Q494R0 122 aa6.86□□□□□ -1.31
LINC00342-202ENST00000448494 C6orf48Q9UBA6 75 aa6.86□□□□□ -1.31
LINC00342-202ENST00000448494 HIVEP3Q5T1R4 2406 aa6.86□□□□□ -1.31
LINC00342-202ENST00000448494 DHRS4-AS1Q9P1J3 65 aa6.86□□□□□ -1.31
LINC00342-202ENST00000448494 OTOGQ6ZRI0 2925 aa6.85□□□□□ -1.31
LINC00342-202ENST00000448494 CSAG1Q6PB30 78 aa6.85□□□□□ -1.31
LINC00342-202ENST00000448494 ANGP03950 147 aaKnown RBP6.83□□□□□ -1.32
LINC00342-202ENST00000448494 SLURP1P55000 103 aa6.83□□□□□ -1.32
LINC00342-202ENST00000448494 CRYBG3Q68DQ2 2970 aa6.83□□□□□ -1.32
LINC00342-202ENST00000448494 F8P00451 2351 aa6.83□□□□□ -1.32
LINC00342-202ENST00000448494 IGHV6-1A0A0B4J1U7 121 aa6.83□□□□□ -1.32
LINC00342-202ENST00000448494 GYPEP15421 78 aa6.83□□□□□ -1.32
LINC00342-202ENST00000448494 Q6ZR54 194 aa6.83□□□□□ -1.32
LINC00342-202ENST00000448494 CSNK1G2-AS1Q8NCQ2 148 aa6.83□□□□□ -1.32
LINC00342-202ENST00000448494 HRES1P13985 223 aa6.82□□□□□ -1.32
LINC00342-202ENST00000448494 SPATA8Q6RVD6 105 aa6.82□□□□□ -1.32
LINC00342-202ENST00000448494 CENPEQ02224 2701 aa6.82□□□□□ -1.32
LINC00342-202ENST00000448494 AKAP9Q99996 3911 aa6.81□□□□□ -1.32
LINC00342-202ENST00000448494 C1orf134Q5TEV5 83 aa6.81□□□□□ -1.32
LINC00342-202ENST00000448494 PDZD2O15018 2839 aa6.81□□□□□ -1.32
LINC00342-202ENST00000448494 DNHD1Q96M86 4753 aa6.81□□□□□ -1.32
LINC00342-202ENST00000448494 ADGRG4Q8IZF6 3080 aa6.79□□□□□ -1.32
LINC00342-202ENST00000448494 EGFEM1PQ0D2K5 195 aa6.79□□□□□ -1.32
LINC00342-202ENST00000448494 APCP25054 2843 aa6.79□□□□□ -1.32
LINC00342-202ENST00000448494 POLQO75417 2590 aa6.79□□□□□ -1.32
LINC00342-202ENST00000448494 DEFB131BA0A096LNP1 70 aa6.79□□□□□ -1.32
LINC00342-202ENST00000448494 GIG44P09565 113 aaPredicted RBP6.77□□□□□ -1.32
LINC00342-202ENST00000448494 PCOTHQ58A44 107 aa6.77□□□□□ -1.32
LINC00342-202ENST00000448494 ITPR3Q14573 2671 aa6.77□□□□□ -1.33
LINC00342-202ENST00000448494 Q6ZRX8 168 aa6.77□□□□□ -1.33
LINC00342-202ENST00000448494 HIVEP1P15822 2718 aa6.77□□□□□ -1.33
LINC00342-202ENST00000448494 ROMO1P60602 79 aa6.76□□□□□ -1.33
LINC00342-202ENST00000448494 NF1P21359 2839 aa6.76□□□□□ -1.33
LINC00342-202ENST00000448494 SETD2Q9BYW2 2564 aaPredicted RBP6.75□□□□□ -1.33
LINC00342-202ENST00000448494 DEFB136Q30KP8 78 aa6.75□□□□□ -1.33
LINC00342-202ENST00000448494 DCHS2Q6V1P9 2916 aa6.75□□□□□ -1.33
LINC00342-202ENST00000448494 A8MWP4 228 aa6.75□□□□□ -1.33
LINC00342-202ENST00000448494 PRO0255Q9UI72 69 aa6.75□□□□□ -1.33
LINC00342-202ENST00000448494 CELSR1Q9NYQ6 3014 aa6.74□□□□□ -1.33
LINC00342-202ENST00000448494 TP53AIP1Q9HCN2 124 aa6.74□□□□□ -1.33
LINC00342-202ENST00000448494 RPL37AP61513 92 aaKnown RBP6.74□□□□□ -1.33
LINC00342-202ENST00000448494 CMC4P56277 68 aaPredicted RBP6.73□□□□□ -1.33
LINC00342-202ENST00000448494 CAMK2N2Q96S95 79 aa6.73□□□□□ -1.33
LINC00342-202ENST00000448494 PRR34Q9NV39 138 aa6.73□□□□□ -1.33
LINC00342-202ENST00000448494 CSMD2Q7Z408 3487 aa6.72□□□□□ -1.33
LINC00342-202ENST00000448494 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.72□□□□□ -1.33
LINC00342-202ENST00000448494 KRTAP4-16G5E9R7 235 aaPredicted RBP6.72□□□□□ -1.33
LINC00342-202ENST00000448494 A0A096LPF7 62 aa6.71□□□□□ -1.34
LINC00342-202ENST00000448494 KRTAP10-9P60411 292 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms