RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 SMCR5Q8TEV8 140 aa8.72□□□□□ -1.01
HDAC4-204ENST00000446876 SPRR4Q96PI1 79 aa8.72□□□□□ -1.01
HDAC4-204ENST00000446876 TRAV23DV6A0A075B6W5 121 aa8.71□□□□□ -1.02
HDAC4-204ENST00000446876 C5orf52A6NGY3 159 aa8.71□□□□□ -1.02
HDAC4-204ENST00000446876 SPANXDQ9BXN6 97 aa8.71□□□□□ -1.02
HDAC4-204ENST00000446876 C3orf22Q8N5N4 141 aa8.7□□□□□ -1.02
HDAC4-204ENST00000446876 OR13C6PQ8NH95 151 aa8.7□□□□□ -1.02
HDAC4-204ENST00000446876 ERC2-IT1O76042 136 aa8.69□□□□□ -1.02
HDAC4-204ENST00000446876 TSPAN13O95857 204 aa8.69□□□□□ -1.02
HDAC4-204ENST00000446876 Q9BRP9 147 aa8.69□□□□□ -1.02
HDAC4-204ENST00000446876 UBR4Q5T4S7 5183 aa8.69□□□□□ -1.02
HDAC4-204ENST00000446876 LRP2P98164 4655 aa8.68□□□□□ -1.02
HDAC4-204ENST00000446876 ZNF73O43830 326 aaPredicted RBP8.68□□□□□ -1.02
HDAC4-204ENST00000446876 Q6ZRX8 168 aa8.68□□□□□ -1.02
HDAC4-204ENST00000446876 PPDPFQ9H3Y8 114 aa8.68□□□□□ -1.02
HDAC4-204ENST00000446876 HSBP1L1C9JCN9 74 aa8.67□□□□□ -1.02
HDAC4-204ENST00000446876 SCGB1D1O95968 90 aa8.67□□□□□ -1.02
HDAC4-204ENST00000446876 ZNF706Q9Y5V0 76 aaPredicted RBP8.67□□□□□ -1.02
HDAC4-204ENST00000446876 MUSTN1Q8IVN3 82 aa8.66□□□□□ -1.02
HDAC4-204ENST00000446876 IFITM1P13164 125 aa8.64□□□□□ -1.03
HDAC4-204ENST00000446876 GAGE2AQ6NT46 116 aa8.64□□□□□ -1.03
HDAC4-204ENST00000446876 LINC00304Q8N9R0 145 aa8.64□□□□□ -1.03
HDAC4-204ENST00000446876 LINC00518Q8N0U6 118 aa8.63□□□□□ -1.03
HDAC4-204ENST00000446876 LPAP08519 4548 aa8.62□□□□□ -1.03
HDAC4-204ENST00000446876 Q6ZVH6 145 aa8.62□□□□□ -1.03
HDAC4-204ENST00000446876 JOSD1Q15040 202 aaPredicted RBP8.61□□□□□ -1.03
HDAC4-204ENST00000446876 PRR4Q16378 134 aa8.61□□□□□ -1.03
HDAC4-204ENST00000446876 LINC00483Q53H64 154 aa8.61□□□□□ -1.03
HDAC4-204ENST00000446876 COPS9Q8WXC6 57 aa8.61□□□□□ -1.03
HDAC4-204ENST00000446876 CBY1Q9Y3M2 126 aa8.61□□□□□ -1.03
HDAC4-204ENST00000446876 C6orf99Q4VX62 202 aa8.6□□□□□ -1.03
HDAC4-204ENST00000446876 ST20-AS1Q8NBB2 130 aa8.6□□□□□ -1.03
HDAC4-204ENST00000446876 A6NDN8 102 aa8.59□□□□□ -1.03
HDAC4-204ENST00000446876 HINT1P49773 126 aaPredicted RBP8.59□□□□□ -1.03
HDAC4-204ENST00000446876 IGLV9-49A0A0B4J1Y8 123 aa8.57□□□□□ -1.04
HDAC4-204ENST00000446876 COX7BP24311 80 aa8.57□□□□□ -1.04
HDAC4-204ENST00000446876 Q8NBF4 154 aa8.57□□□□□ -1.04
HDAC4-204ENST00000446876 RETNLBQ9BQ08 111 aa8.57□□□□□ -1.04
HDAC4-204ENST00000446876 COX8AP10176 69 aa8.56□□□□□ -1.04
HDAC4-204ENST00000446876 ELOF1P60002 83 aaKnown RBP8.56□□□□□ -1.04
HDAC4-204ENST00000446876 MOBPQ13875 183 aa8.56□□□□□ -1.04
HDAC4-204ENST00000446876 PAM16Q9Y3D7 125 aa8.56□□□□□ -1.04
HDAC4-204ENST00000446876 A4D1N5 150 aa8.54□□□□□ -1.04
HDAC4-204ENST00000446876 SPATA45Q537H7 98 aa8.54□□□□□ -1.04
HDAC4-204ENST00000446876 C14orf144Q96I85 54 aa8.54□□□□□ -1.04
HDAC4-204ENST00000446876 DHRS4-AS1Q9P1J3 65 aa8.54□□□□□ -1.04
HDAC4-204ENST00000446876 TMA7Q9Y2S6 64 aaKnown RBP8.54□□□□□ -1.04
HDAC4-204ENST00000446876 TRAV13-2A0A0B4J235 113 aa8.53□□□□□ -1.04
HDAC4-204ENST00000446876 SMIM11BQ8TCY0 68 aa8.52□□□□□ -1.05
HDAC4-204ENST00000446876 C12orf57Q99622 126 aa8.52□□□□□ -1.05
HDAC4-204ENST00000446876 VAMP8Q9BV40 100 aa8.52□□□□□ -1.05
HDAC4-204ENST00000446876 C9orf153Q5TBE3 101 aa8.51□□□□□ -1.05
HDAC4-204ENST00000446876 HIST1H4GQ99525 98 aa8.51□□□□□ -1.05
HDAC4-204ENST00000446876 TRBV7-6A0A0J9YX20 115 aa8.5□□□□□ -1.05
HDAC4-204ENST00000446876 A0A1B0GWB2 263 aa8.5□□□□□ -1.05
HDAC4-204ENST00000446876 DLEU1O43261 78 aa8.5□□□□□ -1.05
HDAC4-204ENST00000446876 C4orf48Q5BLP8 95 aa8.5□□□□□ -1.05
HDAC4-204ENST00000446876 SPAG11AQ6PDA7 123 aa8.5□□□□□ -1.05
HDAC4-204ENST00000446876 SPRR1BP22528 89 aa8.48□□□□□ -1.05
HDAC4-204ENST00000446876 DEFB105AQ8NG35 78 aa8.48□□□□□ -1.05
HDAC4-204ENST00000446876 C2orf91Q6ZV80 131 aa8.47□□□□□ -1.05
HDAC4-204ENST00000446876 SSBP3-AS1Q7Z2R9 100 aa8.47□□□□□ -1.05
HDAC4-204ENST00000446876 RNF213Q63HN8 5207 aa8.47□□□□□ -1.05
HDAC4-204ENST00000446876 PYY3Q5JQD4 70 aa8.46□□□□□ -1.06
HDAC4-204ENST00000446876 SLC25A34Q6PIV7 304 aa8.46□□□□□ -1.06
HDAC4-204ENST00000446876 CTAG1AP78358 180 aa8.45□□□□□ -1.06
HDAC4-204ENST00000446876 TAL2Q16559 108 aa8.45□□□□□ -1.06
HDAC4-204ENST00000446876 Q1RN00 199 aa8.45□□□□□ -1.06
HDAC4-204ENST00000446876 SPINK1P00995 79 aa8.44□□□□□ -1.06
HDAC4-204ENST00000446876 HIGD1BQ9P298 99 aa8.44□□□□□ -1.06
HDAC4-204ENST00000446876 IGLV7-46A0A075B6I9 117 aa8.43□□□□□ -1.06
HDAC4-204ENST00000446876 LINC01547P58512 204 aaPredicted RBP8.43□□□□□ -1.06
HDAC4-204ENST00000446876 LAMTOR3Q9UHA4 124 aa8.43□□□□□ -1.06
HDAC4-204ENST00000446876 TEX49A0A1B0GTD5 131 aa8.42□□□□□ -1.06
HDAC4-204ENST00000446876 IGLV5-48A0A075B6I7 105 aa8.41□□□□□ -1.06
HDAC4-204ENST00000446876 H7C2G1 150 aa8.41□□□□□ -1.06
HDAC4-204ENST00000446876 CFC1BP0CG36 223 aa8.41□□□□□ -1.06
HDAC4-204ENST00000446876 CFC1P0CG37 223 aa8.41□□□□□ -1.06
HDAC4-204ENST00000446876 SMIM29Q86T20 159 aa8.41□□□□□ -1.06
HDAC4-204ENST00000446876 VAMP3Q15836 100 aa8.4□□□□□ -1.06
HDAC4-204ENST00000446876 HRCT1Q6UXD1 115 aa8.4□□□□□ -1.06
HDAC4-204ENST00000446876 LINC00575Q6W349 94 aa8.4□□□□□ -1.06
HDAC4-204ENST00000446876 NHP2Q9NX24 153 aaKnown RBP8.4□□□□□ -1.06
HDAC4-204ENST00000446876 Q8N377 158 aa8.39□□□□□ -1.07
HDAC4-204ENST00000446876 SLC25A20O43772 301 aa8.38□□□□□ -1.07
HDAC4-204ENST00000446876 CEND1Q8N111 149 aa8.38□□□□□ -1.07
HDAC4-204ENST00000446876 RAB37Q96AX2 223 aa8.38□□□□□ -1.07
HDAC4-204ENST00000446876 RPS29P62273 56 aaKnown RBP8.37□□□□□ -1.07
HDAC4-204ENST00000446876 A0A0B4J2C4 111 aa8.36□□□□□ -1.07
HDAC4-204ENST00000446876 A0A0G2JQZ4 141 aa8.36□□□□□ -1.07
HDAC4-204ENST00000446876 hADV29S1A0JD25 119 aa8.36□□□□□ -1.07
HDAC4-204ENST00000446876 FXYD2P54710 66 aa8.36□□□□□ -1.07
HDAC4-204ENST00000446876 TPRXLQ17RH7 258 aa8.36□□□□□ -1.07
HDAC4-204ENST00000446876 Q6ZQY7 126 aa8.36□□□□□ -1.07
HDAC4-204ENST00000446876 FP248Q71RG6 208 aaPredicted RBP8.36□□□□□ -1.07
HDAC4-204ENST00000446876 BVES-AS1Q5T3Y7 98 aa8.34□□□□□ -1.07
HDAC4-204ENST00000446876 CDIP1Q9H305 208 aa8.34□□□□□ -1.07
HDAC4-204ENST00000446876 PRO1933Q9H354 126 aa8.33□□□□□ -1.08
HDAC4-204ENST00000446876 TMEM238LA0A1B0GVL6 79 aa8.31□□□□□ -1.08
HDAC4-204ENST00000446876 A6NJY4 79 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms