RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 PRYO14603 147 aa13.48□□□□□ -0.25
SHOX2-203ENST00000441443 HIGD2AQ9BW72 106 aa13.48□□□□□ -0.25
SHOX2-203ENST00000441443 HIGD2BQ4VC39 106 aa13.47□□□□□ -0.25
SHOX2-203ENST00000441443 OCR1Q9BZK8 76 aa13.47□□□□□ -0.25
SHOX2-203ENST00000441443 PKD1L1Q8TDX9 2849 aa13.46□□□□□ -0.25
SHOX2-203ENST00000441443 LYRM9A8MSI8 78 aa13.45□□□□□ -0.26
SHOX2-203ENST00000441443 ERC2-IT1O76042 136 aa13.45□□□□□ -0.26
SHOX2-203ENST00000441443 FUSP35637 526 aaKnown RBP eCLIP13.45□□□□□ -0.26
SHOX2-203ENST00000441443 CELA1Q9UNI1 258 aa13.45□□□□□ -0.26
SHOX2-203ENST00000441443 GVQW2A0A096LPI5 108 aaPredicted RBP13.44□□□□□ -0.26
SHOX2-203ENST00000441443 VPREB1P12018 145 aa13.44□□□□□ -0.26
SHOX2-203ENST00000441443 LINC00528Q8N1L1 170 aa13.42□□□□□ -0.26
SHOX2-203ENST00000441443 PRR34Q9NV39 138 aa13.42□□□□□ -0.26
SHOX2-203ENST00000441443 DEFB105AQ8NG35 78 aa13.42□□□□□ -0.26
SHOX2-203ENST00000441443 LELP1Q5T871 98 aa13.4□□□□□ -0.26
SHOX2-203ENST00000441443 Q6ZTC4 211 aa13.4□□□□□ -0.26
SHOX2-203ENST00000441443 CAMK2N2Q96S95 79 aa13.4□□□□□ -0.26
SHOX2-203ENST00000441443 APOC4P55056 127 aa13.4□□□□□ -0.26
SHOX2-203ENST00000441443 ESRGQ1W209 222 aa13.4□□□□□ -0.26
SHOX2-203ENST00000441443 FAM30AQ9NZY2 134 aa13.39□□□□□ -0.27
SHOX2-203ENST00000441443 M0R378 163 aa13.38□□□□□ -0.27
SHOX2-203ENST00000441443 COL6A5A8TX70 2615 aa13.37□□□□□ -0.27
SHOX2-203ENST00000441443 FBN1P35555 2871 aaKnown RBP13.37□□□□□ -0.27
SHOX2-203ENST00000441443 LRCOL1A6NCL2 159 aa13.37□□□□□ -0.27
SHOX2-203ENST00000441443 OXLD1Q5BKU9 147 aa13.36□□□□□ -0.27
SHOX2-203ENST00000441443 TENM3Q9P273 2699 aa13.36□□□□□ -0.27
SHOX2-203ENST00000441443 Q6ZRU5 148 aa13.35□□□□□ -0.27
SHOX2-203ENST00000441443 SMIM29Q86T20 159 aa13.35□□□□□ -0.27
SHOX2-203ENST00000441443 C1orf195Q5TG92 126 aa13.33□□□□□ -0.28
SHOX2-203ENST00000441443 RETNQ9HD89 108 aa13.32□□□□□ -0.28
SHOX2-203ENST00000441443 Q8NAQ8 132 aa13.32□□□□□ -0.28
SHOX2-203ENST00000441443 SPART-AS1P0CW21 52 aa13.3□□□□□ -0.28
SHOX2-203ENST00000441443 EGFEM1PQ0D2K5 195 aa13.29□□□□□ -0.28
SHOX2-203ENST00000441443 Q8N377 158 aa13.29□□□□□ -0.28
SHOX2-203ENST00000441443 Q6ZRP5 223 aa13.28□□□□□ -0.28
SHOX2-203ENST00000441443 KPRPQ5T749 579 aaPredicted RBP13.27□□□□□ -0.28
SHOX2-203ENST00000441443 WFDC10BQ8IUB3 73 aa13.27□□□□□ -0.29
SHOX2-203ENST00000441443 NBEAL1Q6ZS30 2694 aa13.26□□□□□ -0.29
SHOX2-203ENST00000441443 C15orf56Q8N910 161 aa13.24□□□□□ -0.29
SHOX2-203ENST00000441443 hDV103S1A0JD37 113 aa13.23□□□□□ -0.29
SHOX2-203ENST00000441443 A0A1W2PNM2 257 aa13.23□□□□□ -0.29
SHOX2-203ENST00000441443 C1orf64Q8NEQ6 169 aa13.21□□□□□ -0.29
SHOX2-203ENST00000441443 V9GYY9 64 aa13.21□□□□□ -0.29
SHOX2-203ENST00000441443 IGLV5-48A0A075B6I7 105 aa13.21□□□□□ -0.29
SHOX2-203ENST00000441443 F8WDY8 70 aa13.21□□□□□ -0.29
SHOX2-203ENST00000441443 PRR4Q16378 134 aa13.21□□□□□ -0.3
SHOX2-203ENST00000441443 KRTAP26-1Q6PEX3 210 aa13.21□□□□□ -0.3
SHOX2-203ENST00000441443 SERTAD4-AS1Q5TG53 156 aa13.2□□□□□ -0.3
SHOX2-203ENST00000441443 MGAM2Q2M2H8 2515 aa13.2□□□□□ -0.3
SHOX2-203ENST00000441443 NKAPP1Q8N9T2 125 aa13.19□□□□□ -0.3
SHOX2-203ENST00000441443 C7orf33Q8WU49 177 aa13.18□□□□□ -0.3
SHOX2-203ENST00000441443 KRTAP10-11P60412 298 aa13.18□□□□□ -0.3
SHOX2-203ENST00000441443 RPL37AP8A6NKH3 93 aa13.17□□□□□ -0.3
SHOX2-203ENST00000441443 PRB2P02812 416 aaPredicted RBP13.17□□□□□ -0.3
SHOX2-203ENST00000441443 C1orf137Q5JT78 98 aa13.17□□□□□ -0.3
SHOX2-203ENST00000441443 KCNQ1DNQ9H478 68 aa13.17□□□□□ -0.3
SHOX2-203ENST00000441443 ST20-AS1Q8NBB2 130 aa13.16□□□□□ -0.3
SHOX2-203ENST00000441443 K7EQZ3 153 aa13.15□□□□□ -0.3
SHOX2-203ENST00000441443 PSPHP1O15172 72 aa13.15□□□□□ -0.3
SHOX2-203ENST00000441443 LCE6AA0A183 80 aa13.15□□□□□ -0.3
SHOX2-203ENST00000441443 DSCR10P59022 87 aa13.14□□□□□ -0.31
SHOX2-203ENST00000441443 Q9BRP9 147 aa13.13□□□□□ -0.31
SHOX2-203ENST00000441443 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.12□□□□□ -0.31
SHOX2-203ENST00000441443 ETDCA0A1B0GVM5 59 aa13.12□□□□□ -0.31
SHOX2-203ENST00000441443 KRTAP24-1Q3LI83 254 aa13.12□□□□□ -0.31
SHOX2-203ENST00000441443 ANK2Q01484 3957 aa13.12□□□□□ -0.31
SHOX2-203ENST00000441443 IGKV2D-24A0A075B6R9 120 aa13.12□□□□□ -0.31
SHOX2-203ENST00000441443 ZCCHC13Q8WW36 166 aaKnown RBP13.12□□□□□ -0.31
SHOX2-203ENST00000441443 SYCNQ0VAF6 134 aa13.11□□□□□ -0.31
SHOX2-203ENST00000441443 SEC61GP60059 68 aa13.1□□□□□ -0.31
SHOX2-203ENST00000441443 Q8NBF4 154 aa13.1□□□□□ -0.31
SHOX2-203ENST00000441443 Q1T7F1 81 aa13.09□□□□□ -0.31
SHOX2-203ENST00000441443 Q6ZRX8 168 aa13.09□□□□□ -0.31
SHOX2-203ENST00000441443 FAM168BA1KXE4 195 aa13.08□□□□□ -0.32
SHOX2-203ENST00000441443 TNP2Q05952 138 aa13.08□□□□□ -0.32
SHOX2-203ENST00000441443 A0A0G2JQZ4 141 aa13.07□□□□□ -0.32
SHOX2-203ENST00000441443 A0A1W2PNN7 141 aa13.07□□□□□ -0.32
SHOX2-203ENST00000441443 DHRS4-AS1Q9P1J3 65 aa13.07□□□□□ -0.32
SHOX2-203ENST00000441443 DEFB116Q30KQ4 102 aa13.06□□□□□ -0.32
SHOX2-203ENST00000441443 PRR15Q8IV56 129 aa13.05□□□□□ -0.32
SHOX2-203ENST00000441443 TRAV22A0A0B4J277 110 aa13.05□□□□□ -0.32
SHOX2-203ENST00000441443 A0A1B0GW54 56 aa13.03□□□□□ -0.32
SHOX2-203ENST00000441443 SPRR4Q96PI1 79 aa13.03□□□□□ -0.32
SHOX2-203ENST00000441443 KRTAP4-16G5E9R7 235 aaPredicted RBP13.02□□□□□ -0.33
SHOX2-203ENST00000441443 HCG22E2RYF7 251 aa13.02□□□□□ -0.33
SHOX2-203ENST00000441443 BAHCC1Q9P281 2608 aa13.01□□□□□ -0.33
SHOX2-203ENST00000441443 WFDC13Q8IUB5 93 aa13□□□□□ -0.33
SHOX2-203ENST00000441443 DEFB131BA0A096LNP1 70 aa12.99□□□□□ -0.33
SHOX2-203ENST00000441443 IGLV1-50A0A075B6I6 118 aa12.99□□□□□ -0.33
SHOX2-203ENST00000441443 PSCAO43653 123 aa12.98□□□□□ -0.33
SHOX2-203ENST00000441443 UBE2BP63146 152 aa12.98□□□□□ -0.33
SHOX2-203ENST00000441443 PMAIP1Q13794 54 aa12.98□□□□□ -0.33
SHOX2-203ENST00000441443 A8MUN3 132 aa12.97□□□□□ -0.33
SHOX2-203ENST00000441443 C11orf45Q8TAV5 145 aa12.97□□□□□ -0.33
SHOX2-203ENST00000441443 CYP4F30PQ9H0H9 118 aa12.97□□□□□ -0.33
SHOX2-203ENST00000441443 STAB2Q8WWQ8 2551 aa12.96□□□□□ -0.33
SHOX2-203ENST00000441443 A8MU10 97 aa12.96□□□□□ -0.34
SHOX2-203ENST00000441443 KRTAP7-1Q8IUC3 87 aa12.94□□□□□ -0.34
SHOX2-203ENST00000441443 SPRR1AP35321 89 aa12.94□□□□□ -0.34
SHOX2-203ENST00000441443 LINC00476Q8WZB0 136 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms