RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 COL6A5A8TX70 2615 aa11.25□□□□□ -0.61
PMS1-213ENST00000441310 COX7BP24311 80 aa11.25□□□□□ -0.61
PMS1-213ENST00000441310 Q6ZRP5 223 aa11.25□□□□□ -0.61
PMS1-213ENST00000441310 IGHV4-28A0A0C4DH34 117 aa11.24□□□□□ -0.61
PMS1-213ENST00000441310 hDV103S1A0JD37 113 aa11.24□□□□□ -0.61
PMS1-213ENST00000441310 XAGE1AQ9HD64 81 aa11.24□□□□□ -0.61
PMS1-213ENST00000441310 PRB2P02812 416 aaPredicted RBP11.24□□□□□ -0.61
PMS1-213ENST00000441310 A0A1B0GUV1 79 aa11.23□□□□□ -0.61
PMS1-213ENST00000441310 ANGP03950 147 aaKnown RBP11.23□□□□□ -0.61
PMS1-213ENST00000441310 KLK12Q9UKR0 248 aa11.23□□□□□ -0.61
PMS1-213ENST00000441310 H3BQ85 93 aa11.22□□□□□ -0.61
PMS1-213ENST00000441310 HTN3P15516 51 aa11.22□□□□□ -0.61
PMS1-213ENST00000441310 C1orf64Q8NEQ6 169 aa11.22□□□□□ -0.61
PMS1-213ENST00000441310 PRR4Q16378 134 aa11.21□□□□□ -0.61
PMS1-213ENST00000441310 ZNF73O43830 326 aaPredicted RBP11.21□□□□□ -0.62
PMS1-213ENST00000441310 SPAG11BQ08648 103 aa11.21□□□□□ -0.62
PMS1-213ENST00000441310 LINC00612Q8N6U2 182 aa11.21□□□□□ -0.62
PMS1-213ENST00000441310 FBN1P35555 2871 aaKnown RBP11.21□□□□□ -0.62
PMS1-213ENST00000441310 SMIM29Q86T20 159 aa11.2□□□□□ -0.62
PMS1-213ENST00000441310 Q6ZRU5 148 aa11.2□□□□□ -0.62
PMS1-213ENST00000441310 OXLD1Q5BKU9 147 aa11.2□□□□□ -0.62
PMS1-213ENST00000441310 REG3AQ06141 175 aa11.19□□□□□ -0.62
PMS1-213ENST00000441310 CYSRT1A8MQ03 144 aa11.18□□□□□ -0.62
PMS1-213ENST00000441310 Q1T7F1 81 aa11.16□□□□□ -0.62
PMS1-213ENST00000441310 HIGD2BQ4VC39 106 aa11.16□□□□□ -0.62
PMS1-213ENST00000441310 IGHV4-30-4P0DP06 118 aa11.15□□□□□ -0.62
PMS1-213ENST00000441310 TRAV22A0A0B4J277 110 aa11.14□□□□□ -0.63
PMS1-213ENST00000441310 ELOF1P60002 83 aaKnown RBP11.14□□□□□ -0.63
PMS1-213ENST00000441310 PRO0255Q9UI72 69 aa11.14□□□□□ -0.63
PMS1-213ENST00000441310 TENM3Q9P273 2699 aa11.14□□□□□ -0.63
PMS1-213ENST00000441310 A8MU10 97 aa11.14□□□□□ -0.63
PMS1-213ENST00000441310 APOC4P55056 127 aa11.13□□□□□ -0.63
PMS1-213ENST00000441310 RETNQ9HD89 108 aa11.13□□□□□ -0.63
PMS1-213ENST00000441310 BAHCC1Q9P281 2608 aa11.12□□□□□ -0.63
PMS1-213ENST00000441310 DEFB105AQ8NG35 78 aa11.11□□□□□ -0.63
PMS1-213ENST00000441310 A8MUN3 132 aa11.11□□□□□ -0.63
PMS1-213ENST00000441310 A0A0J9YWU9 116 aa11.09□□□□□ -0.63
PMS1-213ENST00000441310 KRTAP24-1Q3LI83 254 aa11.09□□□□□ -0.63
PMS1-213ENST00000441310 Q8NAQ8 132 aa11.09□□□□□ -0.63
PMS1-213ENST00000441310 LYRM9A8MSI8 78 aa11.08□□□□□ -0.64
PMS1-213ENST00000441310 NBEAL1Q6ZS30 2694 aa11.08□□□□□ -0.64
PMS1-213ENST00000441310 C6orf48Q9UBA6 75 aa11.08□□□□□ -0.64
PMS1-213ENST00000441310 MGAM2Q2M2H8 2515 aa11.06□□□□□ -0.64
PMS1-213ENST00000441310 KRTAP10-11P60412 298 aa11.05□□□□□ -0.64
PMS1-213ENST00000441310 CD164Q04900 197 aa11.05□□□□□ -0.64
PMS1-213ENST00000441310 LINC00528Q8N1L1 170 aa11.05□□□□□ -0.64
PMS1-213ENST00000441310 SPART-AS1P0CW21 52 aa11.04□□□□□ -0.64
PMS1-213ENST00000441310 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.03□□□□□ -0.64
PMS1-213ENST00000441310 PSCAO43653 123 aa11.03□□□□□ -0.64
PMS1-213ENST00000441310 ST20-AS1Q8NBB2 130 aa11.03□□□□□ -0.64
PMS1-213ENST00000441310 SYCNQ0VAF6 134 aa11.02□□□□□ -0.64
PMS1-213ENST00000441310 ZCCHC13Q8WW36 166 aaKnown RBP11.02□□□□□ -0.65
PMS1-213ENST00000441310 LCE6AA0A183 80 aa11.01□□□□□ -0.65
PMS1-213ENST00000441310 ETDCA0A1B0GVM5 59 aa11.01□□□□□ -0.65
PMS1-213ENST00000441310 VPREB1P12018 145 aa11.01□□□□□ -0.65
PMS1-213ENST00000441310 KPRPQ5T749 579 aaPredicted RBP10.99□□□□□ -0.65
PMS1-213ENST00000441310 M0R378 163 aa10.97□□□□□ -0.65
PMS1-213ENST00000441310 MRPL55Q7Z7F7 128 aaKnown RBP10.97□□□□□ -0.65
PMS1-213ENST00000441310 SPTSSBQ8NFR3 76 aa10.97□□□□□ -0.65
PMS1-213ENST00000441310 K7EQZ3 153 aa10.96□□□□□ -0.65
PMS1-213ENST00000441310 Q5VV11 94 aa10.96□□□□□ -0.65
PMS1-213ENST00000441310 Q8N377 158 aa10.96□□□□□ -0.66
PMS1-213ENST00000441310 ANK2Q01484 3957 aa10.96□□□□□ -0.66
PMS1-213ENST00000441310 GVQW2A0A096LPI5 108 aaPredicted RBP10.96□□□□□ -0.66
PMS1-213ENST00000441310 A0A1W2PNM2 257 aa10.96□□□□□ -0.66
PMS1-213ENST00000441310 CHKB-CPT1BH3BT56 60 aa10.96□□□□□ -0.66
PMS1-213ENST00000441310 CAMK2N2Q96S95 79 aa10.96□□□□□ -0.66
PMS1-213ENST00000441310 CYP4F30PQ9H0H9 118 aa10.95□□□□□ -0.66
PMS1-213ENST00000441310 DSCR10P59022 87 aa10.93□□□□□ -0.66
PMS1-213ENST00000441310 UBE2BP63146 152 aa10.93□□□□□ -0.66
PMS1-213ENST00000441310 DEFB116Q30KQ4 102 aa10.93□□□□□ -0.66
PMS1-213ENST00000441310 IGLV5-48A0A075B6I7 105 aa10.9□□□□□ -0.66
PMS1-213ENST00000441310 C1orf137Q5JT78 98 aa10.9□□□□□ -0.66
PMS1-213ENST00000441310 RBM12B-AS1Q9P1G2 102 aa10.9□□□□□ -0.66
PMS1-213ENST00000441310 C16orf90A8MZG2 172 aa10.9□□□□□ -0.67
PMS1-213ENST00000441310 LELP1Q5T871 98 aa10.89□□□□□ -0.67
PMS1-213ENST00000441310 PRR15LQ9BU68 103 aa10.89□□□□□ -0.67
PMS1-213ENST00000441310 LINC00588Q9Y4M8 146 aa10.89□□□□□ -0.67
PMS1-213ENST00000441310 KTN1-AS1Q86SY8 53 aa10.88□□□□□ -0.67
PMS1-213ENST00000441310 UBE2AP49459 152 aa10.88□□□□□ -0.67
PMS1-213ENST00000441310 WFDC10BQ8IUB3 73 aa10.88□□□□□ -0.67
PMS1-213ENST00000441310 B9D2Q9BPU9 175 aa10.88□□□□□ -0.67
PMS1-213ENST00000441310 WFDC13Q8IUB5 93 aa10.88□□□□□ -0.67
PMS1-213ENST00000441310 HCG22E2RYF7 251 aa10.87□□□□□ -0.67
PMS1-213ENST00000441310 LINC00208Q96KT6 92 aa10.86□□□□□ -0.67
PMS1-213ENST00000441310 PRR34Q9NV39 138 aa10.86□□□□□ -0.67
PMS1-213ENST00000441310 NDUFB1O75438 58 aa10.85□□□□□ -0.67
PMS1-213ENST00000441310 Q8NBF4 154 aa10.85□□□□□ -0.67
PMS1-213ENST00000441310 EGFEM1PQ0D2K5 195 aa10.84□□□□□ -0.67
PMS1-213ENST00000441310 Q8N9P0 234 aaPredicted RBP10.84□□□□□ -0.67
PMS1-213ENST00000441310 MP68P56378 58 aa10.83□□□□□ -0.68
PMS1-213ENST00000441310 NKAPP1Q8N9T2 125 aa10.82□□□□□ -0.68
PMS1-213ENST00000441310 STAB2Q8WWQ8 2551 aa10.82□□□□□ -0.68
PMS1-213ENST00000441310 A0A0G2JQZ4 141 aa10.81□□□□□ -0.68
PMS1-213ENST00000441310 A0A1W2PNN7 141 aa10.81□□□□□ -0.68
PMS1-213ENST00000441310 DEFB131BA0A096LNP1 70 aa10.8□□□□□ -0.68
PMS1-213ENST00000441310 A6NED7 52 aa10.8□□□□□ -0.68
PMS1-213ENST00000441310 RPL37AP8A6NKH3 93 aa10.8□□□□□ -0.68
PMS1-213ENST00000441310 LCA10Q71F78 164 aa10.8□□□□□ -0.68
PMS1-213ENST00000441310 C11orf45Q8TAV5 145 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms