RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 LINC00310P59036 64 aa11.57□□□□□ -0.56
CPNE1-219ENST00000440240 PMCHL2Q9BQD1 86 aa11.56□□□□□ -0.56
CPNE1-219ENST00000440240 CBY1Q9Y3M2 126 aa11.56□□□□□ -0.56
CPNE1-219ENST00000440240 C5orf52A6NGY3 159 aa11.55□□□□□ -0.56
CPNE1-219ENST00000440240 ZNF73O43830 326 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-219ENST00000440240 HINT1P49773 126 aaPredicted RBP11.55□□□□□ -0.56
CPNE1-219ENST00000440240 C9orf153Q5TBE3 101 aa11.55□□□□□ -0.56
CPNE1-219ENST00000440240 KRTAP9-6A0A140TA67 174 aa11.54□□□□□ -0.56
CPNE1-219ENST00000440240 KRTAP4-1Q9BYQ7 146 aa11.53□□□□□ -0.56
CPNE1-219ENST00000440240 A0A0J9YXY3 114 aa11.52□□□□□ -0.57
CPNE1-219ENST00000440240 SOSTDC1Q6X4U4 206 aa11.52□□□□□ -0.57
CPNE1-219ENST00000440240 NPC2P61916 151 aa11.51□□□□□ -0.57
CPNE1-219ENST00000440240 ADAMTSL4-AS1Q5T5F5 129 aa11.51□□□□□ -0.57
CPNE1-219ENST00000440240 XP32Q5T750 250 aa11.51□□□□□ -0.57
CPNE1-219ENST00000440240 EIF4EBP3O60516 100 aaPredicted RBP11.5□□□□□ -0.57
CPNE1-219ENST00000440240 E9PLD3 99 aa11.49□□□□□ -0.57
CPNE1-219ENST00000440240 ST20-AS1Q8NBB2 130 aa11.49□□□□□ -0.57
CPNE1-219ENST00000440240 SLC25A34Q6PIV7 304 aa11.47□□□□□ -0.57
CPNE1-219ENST00000440240 SPANXCQ9NY87 97 aa11.45□□□□□ -0.58
CPNE1-219ENST00000440240 SPRR1BP22528 89 aa11.44□□□□□ -0.58
CPNE1-219ENST00000440240 OR13C6PQ8NH95 151 aa11.44□□□□□ -0.58
CPNE1-219ENST00000440240 DHRS4-AS1Q9P1J3 65 aa11.44□□□□□ -0.58
CPNE1-219ENST00000440240 LINC00308Q8TCZ7 52 aa11.43□□□□□ -0.58
CPNE1-219ENST00000440240 LIMD2Q9BT23 127 aa11.43□□□□□ -0.58
CPNE1-219ENST00000440240 COLCA2A8K830 154 aa11.41□□□□□ -0.58
CPNE1-219ENST00000440240 TIMM17BO60830 172 aa11.41□□□□□ -0.58
CPNE1-219ENST00000440240 LITAFQ99732 161 aa11.4□□□□□ -0.58
CPNE1-219ENST00000440240 SPANXDQ9BXN6 97 aa11.4□□□□□ -0.58
CPNE1-219ENST00000440240 LAMTOR3Q9UHA4 124 aa11.4□□□□□ -0.58
CPNE1-219ENST00000440240 SYS1-DBNDD2H3BUS1 97 aa11.39□□□□□ -0.59
CPNE1-219ENST00000440240 HRCT1Q6UXD1 115 aa11.37□□□□□ -0.59
CPNE1-219ENST00000440240 LINC00518Q8N0U6 118 aa11.37□□□□□ -0.59
CPNE1-219ENST00000440240 LCE2DQ5TA82 110 aaPredicted RBP11.36□□□□□ -0.59
CPNE1-219ENST00000440240 ZNF815PA8K554 130 aa11.34□□□□□ -0.59
CPNE1-219ENST00000440240 COX7BP24311 80 aa11.34□□□□□ -0.59
CPNE1-219ENST00000440240 ELOF1P60002 83 aaKnown RBP11.34□□□□□ -0.59
CPNE1-219ENST00000440240 TAL2Q16559 108 aa11.34□□□□□ -0.59
CPNE1-219ENST00000440240 CD164Q04900 197 aa11.33□□□□□ -0.6
CPNE1-219ENST00000440240 C6orf99Q4VX62 202 aa11.33□□□□□ -0.6
CPNE1-219ENST00000440240 LINC01545Q5VT33 79 aa11.33□□□□□ -0.6
CPNE1-219ENST00000440240 PET117Q6UWS5 81 aa11.32□□□□□ -0.6
CPNE1-219ENST00000440240 LCE2CQ5TA81 110 aa11.31□□□□□ -0.6
CPNE1-219ENST00000440240 PRO1933Q9H354 126 aa11.31□□□□□ -0.6
CPNE1-219ENST00000440240 TEX49A0A1B0GTD5 131 aa11.3□□□□□ -0.6
CPNE1-219ENST00000440240 PCOTHQ58A44 107 aa11.3□□□□□ -0.6
CPNE1-219ENST00000440240 DEFB105AQ8NG35 78 aa11.3□□□□□ -0.6
CPNE1-219ENST00000440240 C9orf92A6NGG3 77 aa11.29□□□□□ -0.6
CPNE1-219ENST00000440240 HIST1H2BKO60814 126 aa11.29□□□□□ -0.6
CPNE1-219ENST00000440240 HIST1H2BJP06899 126 aa11.29□□□□□ -0.6
CPNE1-219ENST00000440240 HIST1H2BOP23527 126 aa11.29□□□□□ -0.6
CPNE1-219ENST00000440240 HIST1H2BBP33778 126 aa11.29□□□□□ -0.6
CPNE1-219ENST00000440240 HIST1H2BDP58876 126 aa11.29□□□□□ -0.6
CPNE1-219ENST00000440240 HIST1H2BCP62807 126 aa11.29□□□□□ -0.6
CPNE1-219ENST00000440240 HIST2H2BEQ16778 126 aa11.29□□□□□ -0.6
CPNE1-219ENST00000440240 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.29□□□□□ -0.6
CPNE1-219ENST00000440240 SLC7A5P1Q8MH63 180 aa11.29□□□□□ -0.6
CPNE1-219ENST00000440240 HIST1H2BHQ93079 126 aa11.29□□□□□ -0.6
CPNE1-219ENST00000440240 HIST1H2BNQ99877 126 aa11.29□□□□□ -0.6
CPNE1-219ENST00000440240 HIST1H2BMQ99879 126 aa11.29□□□□□ -0.6
CPNE1-219ENST00000440240 IGLV8-61A0A075B6I0 122 aa11.28□□□□□ -0.6
CPNE1-219ENST00000440240 TRBV7-6A0A0J9YX20 115 aa11.28□□□□□ -0.6
CPNE1-219ENST00000440240 Q1RN00 199 aa11.28□□□□□ -0.6
CPNE1-219ENST00000440240 H7C2G1 150 aa11.26□□□□□ -0.61
CPNE1-219ENST00000440240 AKR1D1P51857 326 aa11.26□□□□□ -0.61
CPNE1-219ENST00000440240 TTTY13Q9BZ97 58 aa11.26□□□□□ -0.61
CPNE1-219ENST00000440240 Q5XG85 94 aa11.25□□□□□ -0.61
CPNE1-219ENST00000440240 COPS9Q8WXC6 57 aa11.25□□□□□ -0.61
CPNE1-219ENST00000440240 FSIP2Q5CZC0 6907 aa11.24□□□□□ -0.61
CPNE1-219ENST00000440240 KRTAP19-2Q3LHN2 52 aa11.24□□□□□ -0.61
CPNE1-219ENST00000440240 A0A1B0GWB2 263 aa11.23□□□□□ -0.61
CPNE1-219ENST00000440240 SCGB1D4Q6XE38 83 aa11.23□□□□□ -0.61
CPNE1-219ENST00000440240 C3orf79P0CE67 100 aa11.22□□□□□ -0.61
CPNE1-219ENST00000440240 IFITM1P13164 125 aa11.21□□□□□ -0.61
CPNE1-219ENST00000440240 SMIM29Q86T20 159 aa11.21□□□□□ -0.61
CPNE1-219ENST00000440240 A6NDN8 102 aa11.2□□□□□ -0.62
CPNE1-219ENST00000440240 IGLV5-48A0A075B6I7 105 aa11.19□□□□□ -0.62
CPNE1-219ENST00000440240 A4D1N5 150 aa11.19□□□□□ -0.62
CPNE1-219ENST00000440240 MT1HP80294 61 aa11.19□□□□□ -0.62
CPNE1-219ENST00000440240 Q6ZVH6 145 aa11.19□□□□□ -0.62
CPNE1-219ENST00000440240 CFC1BP0CG36 223 aa11.18□□□□□ -0.62
CPNE1-219ENST00000440240 C1orf195Q5TG92 126 aa11.18□□□□□ -0.62
CPNE1-219ENST00000440240 KRTDAPP60985 99 aa11.17□□□□□ -0.62
CPNE1-219ENST00000440240 CRCT1Q9UGL9 99 aa11.17□□□□□ -0.62
CPNE1-219ENST00000440240 NHP2Q9NX24 153 aaKnown RBP11.15□□□□□ -0.62
CPNE1-219ENST00000440240 C20orf202A1L168 122 aa11.14□□□□□ -0.63
CPNE1-219ENST00000440240 MUSTN1Q8IVN3 82 aa11.14□□□□□ -0.63
CPNE1-219ENST00000440240 COA6Q5JTJ3 125 aaKnown RBP11.13□□□□□ -0.63
CPNE1-219ENST00000440240 TRAV13-2A0A0B4J235 113 aa11.12□□□□□ -0.63
CPNE1-219ENST00000440240 ANKRD39Q53RE8 183 aa11.12□□□□□ -0.63
CPNE1-219ENST00000440240 A0A0G2JQZ4 141 aa11.11□□□□□ -0.63
CPNE1-219ENST00000440240 TCL1BO95988 128 aa11.11□□□□□ -0.63
CPNE1-219ENST00000440240 RPL37P61927 97 aaKnown RBP11.1□□□□□ -0.63
CPNE1-219ENST00000440240 SMIM11BQ8TCY0 68 aa11.08□□□□□ -0.64
CPNE1-219ENST00000440240 PCP2Q8IVA1 136 aa11.07□□□□□ -0.64
CPNE1-219ENST00000440240 VAMP3Q15836 100 aa11.06□□□□□ -0.64
CPNE1-219ENST00000440240 ATOH7Q8N100 152 aa11.06□□□□□ -0.64
CPNE1-219ENST00000440240 F8WEM9 126 aa11.05□□□□□ -0.64
CPNE1-219ENST00000440240 LORP23490 312 aaPredicted RBP11.03□□□□□ -0.64
CPNE1-219ENST00000440240 KRTAP10-6P60371 365 aaPredicted RBP11.03□□□□□ -0.64
CPNE1-219ENST00000440240 SNRPEP62304 92 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms