RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 LINC00575Q6W349 94 aa9.4□□□□□ -0.9
LIMD1-202ENST00000440097 LINC01547P58512 204 aaPredicted RBP9.4□□□□□ -0.91
LIMD1-202ENST00000440097 HAMPP81172 84 aa9.4□□□□□ -0.91
LIMD1-202ENST00000440097 XAGE1AQ9HD64 81 aa9.4□□□□□ -0.91
LIMD1-202ENST00000440097 C6orf48Q9UBA6 75 aa9.4□□□□□ -0.91
LIMD1-202ENST00000440097 LAMTOR3Q9UHA4 124 aa9.4□□□□□ -0.91
LIMD1-202ENST00000440097 SERP1Q9Y6X1 66 aa9.39□□□□□ -0.91
LIMD1-202ENST00000440097 DNAH10OSP0CZ25 163 aa9.39□□□□□ -0.91
LIMD1-202ENST00000440097 EPM2AB3EWF7 344 aa9.38□□□□□ -0.91
LIMD1-202ENST00000440097 SNURFQ9Y675 71 aa9.38□□□□□ -0.91
LIMD1-202ENST00000440097 KRTAP26-1Q6PEX3 210 aa9.38□□□□□ -0.91
LIMD1-202ENST00000440097 Q6ZVQ6 151 aa9.38□□□□□ -0.91
LIMD1-202ENST00000440097 LOC110117498A0A087WWA1 95 aa9.37□□□□□ -0.91
LIMD1-202ENST00000440097 C15orf56Q8N910 161 aa9.37□□□□□ -0.91
LIMD1-202ENST00000440097 BCE1O60756 84 aa9.36□□□□□ -0.91
LIMD1-202ENST00000440097 Q6ZRU5 148 aa9.36□□□□□ -0.91
LIMD1-202ENST00000440097 RMI2Q96E14 147 aa9.36□□□□□ -0.91
LIMD1-202ENST00000440097 KLKP1Q107X0 134 aa9.35□□□□□ -0.91
LIMD1-202ENST00000440097 GVQW2A0A096LPI5 108 aaPredicted RBP9.35□□□□□ -0.91
LIMD1-202ENST00000440097 DNAH9Q9NYC9 4486 aa9.34□□□□□ -0.91
LIMD1-202ENST00000440097 F8WDY8 70 aa9.34□□□□□ -0.91
LIMD1-202ENST00000440097 MUC7Q8TAX7 377 aa9.34□□□□□ -0.91
LIMD1-202ENST00000440097 F8WEM9 126 aa9.33□□□□□ -0.92
LIMD1-202ENST00000440097 Q6ZQY7 126 aa9.32□□□□□ -0.92
LIMD1-202ENST00000440097 LINC00336Q6ZUF6 198 aa9.32□□□□□ -0.92
LIMD1-202ENST00000440097 FBN3Q75N90 2809 aa9.32□□□□□ -0.92
LIMD1-202ENST00000440097 UBE2DNLQ8IWF7 75 aa9.31□□□□□ -0.92
LIMD1-202ENST00000440097 SYCNQ0VAF6 134 aa9.31□□□□□ -0.92
LIMD1-202ENST00000440097 SCXQ7RTU7 201 aa9.31□□□□□ -0.92
LIMD1-202ENST00000440097 B9D2Q9BPU9 175 aa9.31□□□□□ -0.92
LIMD1-202ENST00000440097 DNAH1Q9P2D7 4330 aa9.31□□□□□ -0.92
LIMD1-202ENST00000440097 CXCL6P80162 114 aa9.3□□□□□ -0.92
LIMD1-202ENST00000440097 FP248Q71RG6 208 aaPredicted RBP9.29□□□□□ -0.92
LIMD1-202ENST00000440097 CASC10Q5T4H9 136 aa9.29□□□□□ -0.92
LIMD1-202ENST00000440097 PRO0628Q9UI54 55 aa9.28□□□□□ -0.92
LIMD1-202ENST00000440097 SMIM26A0A096LP01 95 aa9.28□□□□□ -0.92
LIMD1-202ENST00000440097 IGLV6-57P01721 117 aa9.27□□□□□ -0.93
LIMD1-202ENST00000440097 PDE6GP18545 87 aa9.27□□□□□ -0.93
LIMD1-202ENST00000440097 Q6ZRP5 223 aa9.27□□□□□ -0.93
LIMD1-202ENST00000440097 DNAH10Q8IVF4 4471 aa9.26□□□□□ -0.93
LIMD1-202ENST00000440097 DNAH7Q8WXX0 4024 aa9.26□□□□□ -0.93
LIMD1-202ENST00000440097 TRBV7-4A0A0J9YYF1 115 aa9.25□□□□□ -0.93
LIMD1-202ENST00000440097 LINC00474Q9P2X8 69 aa9.25□□□□□ -0.93
LIMD1-202ENST00000440097 TRBV7-6A0A0J9YX20 115 aa9.24□□□□□ -0.93
LIMD1-202ENST00000440097 PSCAO43653 123 aa9.23□□□□□ -0.93
LIMD1-202ENST00000440097 NDUFC1O43677 76 aa9.23□□□□□ -0.93
LIMD1-202ENST00000440097 VPREB1P12018 145 aa9.23□□□□□ -0.93
LIMD1-202ENST00000440097 NREPQ16612 68 aa9.23□□□□□ -0.93
LIMD1-202ENST00000440097 DIRC1Q969H9 104 aa9.22□□□□□ -0.93
LIMD1-202ENST00000440097 H3BQ85 93 aa9.22□□□□□ -0.93
LIMD1-202ENST00000440097 APLNQ9ULZ1 77 aa9.21□□□□□ -0.93
LIMD1-202ENST00000440097 NKAPP1Q8N9T2 125 aa9.21□□□□□ -0.94
LIMD1-202ENST00000440097 M0R378 163 aa9.2□□□□□ -0.94
LIMD1-202ENST00000440097 BPY2O14599 106 aa9.2□□□□□ -0.94
LIMD1-202ENST00000440097 KRTAP1-5Q9BYS1 174 aa9.2□□□□□ -0.94
LIMD1-202ENST00000440097 PLECQ15149 4684 aaKnown RBP9.2□□□□□ -0.94
LIMD1-202ENST00000440097 ZNF73O43830 326 aaPredicted RBP9.2□□□□□ -0.94
LIMD1-202ENST00000440097 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.2□□□□□ -0.94
LIMD1-202ENST00000440097 TMEM254Q8TBM7 123 aa9.2□□□□□ -0.94
LIMD1-202ENST00000440097 COX7BP24311 80 aa9.19□□□□□ -0.94
LIMD1-202ENST00000440097 Q8N9L7 120 aa9.19□□□□□ -0.94
LIMD1-202ENST00000440097 ATP5EP56381 51 aaPredicted RBP9.18□□□□□ -0.94
LIMD1-202ENST00000440097 SEC61GP60059 68 aa9.18□□□□□ -0.94
LIMD1-202ENST00000440097 STARD9Q9P2P6 4700 aa9.18□□□□□ -0.94
LIMD1-202ENST00000440097 NUPR2A6NF83 97 aa9.17□□□□□ -0.94
LIMD1-202ENST00000440097 FAM229BQ4G0N7 80 aa9.16□□□□□ -0.94
LIMD1-202ENST00000440097 SERTAD4-AS1Q5TG53 156 aa9.16□□□□□ -0.94
LIMD1-202ENST00000440097 PKIGQ9Y2B9 76 aa9.16□□□□□ -0.94
LIMD1-202ENST00000440097 ELOF1P60002 83 aaKnown RBP9.16□□□□□ -0.94
LIMD1-202ENST00000440097 FAM168BA1KXE4 195 aa9.14□□□□□ -0.95
LIMD1-202ENST00000440097 IGKV4-1P06312 121 aa9.14□□□□□ -0.95
LIMD1-202ENST00000440097 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.13□□□□□ -0.95
LIMD1-202ENST00000440097 ERC2-IT1O76042 136 aa9.13□□□□□ -0.95
LIMD1-202ENST00000440097 BRK1Q8WUW1 75 aa9.13□□□□□ -0.95
LIMD1-202ENST00000440097 RPL37AP8A6NKH3 93 aa9.12□□□□□ -0.95
LIMD1-202ENST00000440097 TLX1NBP0CAT3 122 aa9.12□□□□□ -0.95
LIMD1-202ENST00000440097 MPLKIPQ8TAP9 179 aa9.12□□□□□ -0.95
LIMD1-202ENST00000440097 PRYO14603 147 aa9.12□□□□□ -0.95
LIMD1-202ENST00000440097 C7orf33Q8WU49 177 aa9.12□□□□□ -0.95
LIMD1-202ENST00000440097 OCR1Q9BZK8 76 aa9.11□□□□□ -0.95
LIMD1-202ENST00000440097 IGKV2-24A0A0C4DH68 120 aa9.11□□□□□ -0.95
LIMD1-202ENST00000440097 A0A0U1RQV1 116 aa9.11□□□□□ -0.95
LIMD1-202ENST00000440097 FUSP35637 526 aaKnown RBP eCLIP9.09□□□□□ -0.95
LIMD1-202ENST00000440097 DYNC2H1Q8NCM8 4307 aaKnown RBP9.08□□□□□ -0.96
LIMD1-202ENST00000440097 NBDYA0A0U1RRE5 68 aa9.08□□□□□ -0.96
LIMD1-202ENST00000440097 C3orf84H3BNL1 204 aa9.08□□□□□ -0.96
LIMD1-202ENST00000440097 LINC00528Q8N1L1 170 aa9.08□□□□□ -0.96
LIMD1-202ENST00000440097 HIGD2AQ9BW72 106 aa9.08□□□□□ -0.96
LIMD1-202ENST00000440097 KMT2AQ03164 3969 aa9.06□□□□□ -0.96
LIMD1-202ENST00000440097 KCNQ1DNQ9H478 68 aa9.06□□□□□ -0.96
LIMD1-202ENST00000440097 C14orf177Q52M58 125 aa9.05□□□□□ -0.96
LIMD1-202ENST00000440097 MRPL55Q7Z7F7 128 aaKnown RBP9.05□□□□□ -0.96
LIMD1-202ENST00000440097 PLA2G2DQ9UNK4 145 aa9.05□□□□□ -0.96
LIMD1-202ENST00000440097 A0A096LNI7 61 aa9.04□□□□□ -0.96
LIMD1-202ENST00000440097 ETDCA0A1B0GVM5 59 aa9.03□□□□□ -0.96
LIMD1-202ENST00000440097 DEFB105AQ8NG35 78 aa9.03□□□□□ -0.96
LIMD1-202ENST00000440097 CNBPP62633 177 aaKnown RBP9.02□□□□□ -0.96
LIMD1-202ENST00000440097 KRTAP7-1Q8IUC3 87 aa9.02□□□□□ -0.96
LIMD1-202ENST00000440097 FAM30AQ9NZY2 134 aa9.02□□□□□ -0.96
LIMD1-202ENST00000440097 IGLV1-50A0A075B6I6 118 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 9568.2 ms