RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 CFC1BP0CG36 223 aa11.31□□□□□ -0.6
HDAC6-208ENST00000438518 CFC1P0CG37 223 aa11.31□□□□□ -0.6
HDAC6-208ENST00000438518 HINT1P49773 126 aaPredicted RBP11.31□□□□□ -0.6
HDAC6-208ENST00000438518 H0Y9J4 135 aa11.3□□□□□ -0.6
HDAC6-208ENST00000438518 ZNF73O43830 326 aaPredicted RBP11.3□□□□□ -0.6
HDAC6-208ENST00000438518 CTAG1AP78358 180 aa11.3□□□□□ -0.6
HDAC6-208ENST00000438518 VPS13BQ7Z7G8 4022 aa11.3□□□□□ -0.6
HDAC6-208ENST00000438518 ETDCA0A1B0GVM5 59 aa11.29□□□□□ -0.6
HDAC6-208ENST00000438518 RPL28P46779 137 aaKnown RBP11.29□□□□□ -0.6
HDAC6-208ENST00000438518 DIRC1Q969H9 104 aa11.29□□□□□ -0.6
HDAC6-208ENST00000438518 KRTAP4-16G5E9R7 235 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-208ENST00000438518 ZNF861PO60384 105 aa11.28□□□□□ -0.6
HDAC6-208ENST00000438518 FAM19A1Q7Z5A9 133 aa11.28□□□□□ -0.6
HDAC6-208ENST00000438518 A0A1B0GWB2 263 aa11.27□□□□□ -0.61
HDAC6-208ENST00000438518 RPL13AP40429 203 aaKnown RBP11.27□□□□□ -0.61
HDAC6-208ENST00000438518 UBE2AP49459 152 aa11.27□□□□□ -0.61
HDAC6-208ENST00000438518 BVES-AS1Q5T3Y7 98 aa11.27□□□□□ -0.61
HDAC6-208ENST00000438518 SPINK6Q6UWN8 80 aa11.27□□□□□ -0.61
HDAC6-208ENST00000438518 TRBV7-6A0A0J9YX20 115 aa11.26□□□□□ -0.61
HDAC6-208ENST00000438518 NHP2Q9NX24 153 aaKnown RBP11.26□□□□□ -0.61
HDAC6-208ENST00000438518 PRO1854Q9UHT4 67 aa11.26□□□□□ -0.61
HDAC6-208ENST00000438518 KRTAP13-1Q8IUC0 172 aa11.25□□□□□ -0.61
HDAC6-208ENST00000438518 KRTAP17-1Q9BYP8 105 aa11.25□□□□□ -0.61
HDAC6-208ENST00000438518 B5MCH6 92 aa11.24□□□□□ -0.61
HDAC6-208ENST00000438518 C6orf99Q4VX62 202 aa11.24□□□□□ -0.61
HDAC6-208ENST00000438518 Q6ZRX8 168 aa11.24□□□□□ -0.61
HDAC6-208ENST00000438518 SMIM11BQ8TCY0 68 aa11.24□□□□□ -0.61
HDAC6-208ENST00000438518 PRLHP81277 87 aa11.22□□□□□ -0.61
HDAC6-208ENST00000438518 ELOF1P60002 83 aaKnown RBP11.21□□□□□ -0.61
HDAC6-208ENST00000438518 VAMP3Q15836 100 aa11.21□□□□□ -0.61
HDAC6-208ENST00000438518 COX7BP24311 80 aa11.19□□□□□ -0.62
HDAC6-208ENST00000438518 Q1RN00 199 aa11.19□□□□□ -0.62
HDAC6-208ENST00000438518 INAFM2P0DMQ5 153 aa11.18□□□□□ -0.62
HDAC6-208ENST00000438518 HIGD2AQ9BW72 106 aa11.17□□□□□ -0.62
HDAC6-208ENST00000438518 DHRS4-AS1Q9P1J3 65 aa11.17□□□□□ -0.62
HDAC6-208ENST00000438518 H7C2G1 150 aa11.16□□□□□ -0.62
HDAC6-208ENST00000438518 SRRM2Q9UQ35 2752 aaKnown RBP11.15□□□□□ -0.62
HDAC6-208ENST00000438518 K7ERJ3 54 aa11.15□□□□□ -0.62
HDAC6-208ENST00000438518 SMCR5Q8TEV8 140 aa11.14□□□□□ -0.63
HDAC6-208ENST00000438518 KRTAP4-5Q9BYR2 181 aa11.14□□□□□ -0.63
HDAC6-208ENST00000438518 ZNF706Q9Y5V0 76 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-208ENST00000438518 H0YGX0 51 aa11.13□□□□□ -0.63
HDAC6-208ENST00000438518 Q9BRP9 147 aa11.13□□□□□ -0.63
HDAC6-208ENST00000438518 PKHD1L1Q86WI1 4243 aa11.12□□□□□ -0.63
HDAC6-208ENST00000438518 SLC25A20O43772 301 aa11.12□□□□□ -0.63
HDAC6-208ENST00000438518 COX6CP09669 75 aa11.12□□□□□ -0.63
HDAC6-208ENST00000438518 TSPAN13O95857 204 aa11.11□□□□□ -0.63
HDAC6-208ENST00000438518 BATFQ16520 125 aa11.11□□□□□ -0.63
HDAC6-208ENST00000438518 SNCGO76070 127 aa11.1□□□□□ -0.63
HDAC6-208ENST00000438518 PSMB2P49721 201 aa11.09□□□□□ -0.63
HDAC6-208ENST00000438518 TRIAP1O43715 76 aa11.08□□□□□ -0.64
HDAC6-208ENST00000438518 LINC00575Q6W349 94 aa11.08□□□□□ -0.64
HDAC6-208ENST00000438518 A0A1B0GX51 115 aa11.07□□□□□ -0.64
HDAC6-208ENST00000438518 PCP4L1A6NKN8 68 aa11.06□□□□□ -0.64
HDAC6-208ENST00000438518 hADV29S1A0JD25 119 aa11.05□□□□□ -0.64
HDAC6-208ENST00000438518 SPRR4Q96PI1 79 aa11.05□□□□□ -0.64
HDAC6-208ENST00000438518 SNHG12Q9BXW3 62 aa11.05□□□□□ -0.64
HDAC6-208ENST00000438518 ABCA13Q86UQ4 5058 aa11.04□□□□□ -0.64
HDAC6-208ENST00000438518 ERC2-IT1O76042 136 aa11.04□□□□□ -0.64
HDAC6-208ENST00000438518 OXTP01178 125 aa11.04□□□□□ -0.64
HDAC6-208ENST00000438518 KRTAP1-4P0C5Y4 121 aa11.04□□□□□ -0.64
HDAC6-208ENST00000438518 FAM229BQ4G0N7 80 aa11.03□□□□□ -0.64
HDAC6-208ENST00000438518 LYRM7Q5U5X0 104 aa11.03□□□□□ -0.64
HDAC6-208ENST00000438518 LINC00483Q53H64 154 aa11.02□□□□□ -0.65
HDAC6-208ENST00000438518 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-208ENST00000438518 LINC01600Q96MT4 127 aa11.01□□□□□ -0.65
HDAC6-208ENST00000438518 GHRHP01286 108 aa11□□□□□ -0.65
HDAC6-208ENST00000438518 SCGB1C2P0DMR2 95 aa11□□□□□ -0.65
HDAC6-208ENST00000438518 COL5A1-AS1Q5SY13 56 aa11□□□□□ -0.65
HDAC6-208ENST00000438518 SPRR1BP22528 89 aa10.99□□□□□ -0.65
HDAC6-208ENST00000438518 OCIAD2Q56VL3 154 aa10.99□□□□□ -0.65
HDAC6-208ENST00000438518 IGLV5-48A0A075B6I7 105 aa10.98□□□□□ -0.65
HDAC6-208ENST00000438518 KRTAP29-1A8MX34 341 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-208ENST00000438518 TEX49A0A1B0GTD5 131 aa10.97□□□□□ -0.65
HDAC6-208ENST00000438518 C9orf118A6NHY6 69 aa10.97□□□□□ -0.65
HDAC6-208ENST00000438518 TAX1BP3O14907 124 aa10.97□□□□□ -0.65
HDAC6-208ENST00000438518 CRYGAP11844 174 aa10.97□□□□□ -0.65
HDAC6-208ENST00000438518 GAGE2AQ6NT46 116 aa10.97□□□□□ -0.65
HDAC6-208ENST00000438518 Q6ZQY7 126 aa10.97□□□□□ -0.65
HDAC6-208ENST00000438518 ST20-AS1Q8NBB2 130 aa10.97□□□□□ -0.65
HDAC6-208ENST00000438518 PPDPFLQ8WWR9 84 aa10.97□□□□□ -0.65
HDAC6-208ENST00000438518 FAM218AQ96MZ4 157 aa10.97□□□□□ -0.65
HDAC6-208ENST00000438518 FAT3Q8TDW7 4589 aa10.96□□□□□ -0.66
HDAC6-208ENST00000438518 DNAL4O96015 105 aa10.95□□□□□ -0.66
HDAC6-208ENST00000438518 CLEC2BQ92478 149 aa10.95□□□□□ -0.66
HDAC6-208ENST00000438518 H3BUT2 72 aa10.94□□□□□ -0.66
HDAC6-208ENST00000438518 LST1O00453 97 aa10.94□□□□□ -0.66
HDAC6-208ENST00000438518 TRACP01848 142 aa10.94□□□□□ -0.66
HDAC6-208ENST00000438518 H3BQ85 93 aa10.93□□□□□ -0.66
HDAC6-208ENST00000438518 TRBV20-1A0A075B6N2 111 aa10.92□□□□□ -0.66
HDAC6-208ENST00000438518 LINC01547P58512 204 aaPredicted RBP10.92□□□□□ -0.66
HDAC6-208ENST00000438518 MYCBP2O75592 4640 aa10.91□□□□□ -0.66
HDAC6-208ENST00000438518 LRP1Q07954 4544 aaKnown RBP10.91□□□□□ -0.66
HDAC6-208ENST00000438518 A0A087X002 238 aa10.91□□□□□ -0.66
HDAC6-208ENST00000438518 ATXN8Q156A1 80 aa10.91□□□□□ -0.66
HDAC6-208ENST00000438518 DEFB105AQ8NG35 78 aa10.91□□□□□ -0.66
HDAC6-208ENST00000438518 NAA38Q9BRA0 125 aaKnown RBP10.91□□□□□ -0.66
HDAC6-208ENST00000438518 LAMTOR3Q9UHA4 124 aa10.91□□□□□ -0.66
HDAC6-208ENST00000438518 PCLOQ9Y6V0 5065 aa10.91□□□□□ -0.66
HDAC6-208ENST00000438518 A0A1W2PPM0 123 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms