RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 A0A087WTM6 91 aa10.47□□□□□ -0.73
PTPN13-204ENST00000436978 K7EQZ3 153 aa10.47□□□□□ -0.73
PTPN13-204ENST00000436978 PRO0628Q9UI54 55 aa10.47□□□□□ -0.73
PTPN13-204ENST00000436978 KRTAP10-3P60369 221 aa10.46□□□□□ -0.73
PTPN13-204ENST00000436978 IGFL1Q6UW32 110 aa10.45□□□□□ -0.74
PTPN13-204ENST00000436978 GIG44P09565 113 aaPredicted RBP10.44□□□□□ -0.74
PTPN13-204ENST00000436978 C9orf129Q5T035 196 aaKnown RBP10.43□□□□□ -0.74
PTPN13-204ENST00000436978 A0A1B0GVX0 72 aa10.41□□□□□ -0.74
PTPN13-204ENST00000436978 PRR15Q8IV56 129 aa10.41□□□□□ -0.74
PTPN13-204ENST00000436978 COX6B2Q6YFQ2 88 aa10.4□□□□□ -0.74
PTPN13-204ENST00000436978 C9orf163Q8N9P6 203 aa10.4□□□□□ -0.74
PTPN13-204ENST00000436978 CNBPP62633 177 aaKnown RBP10.4□□□□□ -0.74
PTPN13-204ENST00000436978 BPTFQ12830 3046 aa10.39□□□□□ -0.75
PTPN13-204ENST00000436978 C8orf17Q9NRJ1 99 aa10.39□□□□□ -0.75
PTPN13-204ENST00000436978 DSCR10P59022 87 aa10.37□□□□□ -0.75
PTPN13-204ENST00000436978 IGLV7-43P04211 117 aa10.37□□□□□ -0.75
PTPN13-204ENST00000436978 OBSCN-AS1Q96MR7 158 aa10.37□□□□□ -0.75
PTPN13-204ENST00000436978 KRTAP1-3Q8IUG1 177 aa10.36□□□□□ -0.75
PTPN13-204ENST00000436978 COA5Q86WW8 74 aa10.36□□□□□ -0.75
PTPN13-204ENST00000436978 Q8N377 158 aa10.36□□□□□ -0.75
PTPN13-204ENST00000436978 APLNQ9ULZ1 77 aa10.35□□□□□ -0.75
PTPN13-204ENST00000436978 IGLV8-61A0A075B6I0 122 aa10.35□□□□□ -0.75
PTPN13-204ENST00000436978 CYP4F30PQ9H0H9 118 aa10.33□□□□□ -0.76
PTPN13-204ENST00000436978 ZNF575Q86XF7 245 aa10.32□□□□□ -0.76
PTPN13-204ENST00000436978 RBM12B-AS1Q9P1G2 102 aa10.31□□□□□ -0.76
PTPN13-204ENST00000436978 C4orf26Q17RF5 130 aa10.31□□□□□ -0.76
PTPN13-204ENST00000436978 UTRNP46939 3433 aa10.3□□□□□ -0.76
PTPN13-204ENST00000436978 C9orf92A6NGG3 77 aa10.3□□□□□ -0.76
PTPN13-204ENST00000436978 LINC01600Q96MT4 127 aa10.3□□□□□ -0.76
PTPN13-204ENST00000436978 USP24Q9UPU5 2620 aa10.29□□□□□ -0.76
PTPN13-204ENST00000436978 PSORS1C2Q9UIG4 136 aa10.29□□□□□ -0.76
PTPN13-204ENST00000436978 UQCR11O14957 56 aa10.29□□□□□ -0.76
PTPN13-204ENST00000436978 SPRR4Q96PI1 79 aa10.28□□□□□ -0.76
PTPN13-204ENST00000436978 IGLV5-37A0A075B6J1 123 aa10.27□□□□□ -0.77
PTPN13-204ENST00000436978 EPG5Q9HCE0 2579 aa10.27□□□□□ -0.77
PTPN13-204ENST00000436978 FLNAP21333 2647 aaKnown RBP10.27□□□□□ -0.77
PTPN13-204ENST00000436978 C5orf42Q9H799 3197 aa10.26□□□□□ -0.77
PTPN13-204ENST00000436978 KRTAP1-1Q07627 177 aa10.26□□□□□ -0.77
PTPN13-204ENST00000436978 A0A1W2PNN7 141 aa10.24□□□□□ -0.77
PTPN13-204ENST00000436978 KLKP1Q107X0 134 aa10.23□□□□□ -0.77
PTPN13-204ENST00000436978 SMR3BP02814 79 aaPredicted RBP10.23□□□□□ -0.77
PTPN13-204ENST00000436978 SPINT4Q6UDR6 99 aa10.2□□□□□ -0.78
PTPN13-204ENST00000436978 EIF4EBP3O60516 100 aaPredicted RBP10.2□□□□□ -0.78
PTPN13-204ENST00000436978 CD164Q04900 197 aa10.19□□□□□ -0.78
PTPN13-204ENST00000436978 ITPR3Q14573 2671 aa10.19□□□□□ -0.78
PTPN13-204ENST00000436978 MIR22HGQ0VDD5 57 aa10.18□□□□□ -0.78
PTPN13-204ENST00000436978 CRIPTQ9P021 101 aa10.16□□□□□ -0.78
PTPN13-204ENST00000436978 SPANXA2-OT1Q8N9U9 137 aa10.16□□□□□ -0.78
PTPN13-204ENST00000436978 ANAPC11Q9NYG5 84 aa10.15□□□□□ -0.78
PTPN13-204ENST00000436978 CASC10Q5T4H9 136 aa10.14□□□□□ -0.79
PTPN13-204ENST00000436978 HELZ2Q9BYK8 2649 aaKnown RBP10.11□□□□□ -0.79
PTPN13-204ENST00000436978 IGLV5-48A0A075B6I7 105 aa10.1□□□□□ -0.79
PTPN13-204ENST00000436978 WIPF1O43516 503 aa10.1□□□□□ -0.79
PTPN13-204ENST00000436978 A8MUN3 132 aa10.09□□□□□ -0.79
PTPN13-204ENST00000436978 HECTD1Q9ULT8 2610 aa10.08□□□□□ -0.8
PTPN13-204ENST00000436978 CFAP46Q8IYW2 2715 aa10.08□□□□□ -0.8
PTPN13-204ENST00000436978 A0A0G2JQZ4 141 aa10.08□□□□□ -0.8
PTPN13-204ENST00000436978 FAM229BQ4G0N7 80 aa10.06□□□□□ -0.8
PTPN13-204ENST00000436978 A0A1W2PNM2 257 aa10.05□□□□□ -0.8
PTPN13-204ENST00000436978 FAM104AQ969W3 186 aa10.05□□□□□ -0.8
PTPN13-204ENST00000436978 H7BZZ5 65 aa10.04□□□□□ -0.8
PTPN13-204ENST00000436978 TNP2Q05952 138 aa10.02□□□□□ -0.81
PTPN13-204ENST00000436978 FLNBO75369 2602 aaKnown RBP10.02□□□□□ -0.81
PTPN13-204ENST00000436978 CEP350Q5VT06 3117 aa10.01□□□□□ -0.81
PTPN13-204ENST00000436978 Q6ZSA8 131 aa10□□□□□ -0.81
PTPN13-204ENST00000436978 MGAM2Q2M2H8 2515 aa10□□□□□ -0.81
PTPN13-204ENST00000436978 ATRQ13535 2644 aa9.99□□□□□ -0.81
PTPN13-204ENST00000436978 CDC42SE1Q9NRR8 79 aa9.98□□□□□ -0.81
PTPN13-204ENST00000436978 CHD7Q9P2D1 2997 aa9.98□□□□□ -0.81
PTPN13-204ENST00000436978 Q8N1X5 172 aa9.96□□□□□ -0.81
PTPN13-204ENST00000436978 MAST4O15021 2626 aa9.96□□□□□ -0.82
PTPN13-204ENST00000436978 IGLV7-46A0A075B6I9 117 aa9.95□□□□□ -0.82
PTPN13-204ENST00000436978 PLAC8Q9NZF1 115 aa9.94□□□□□ -0.82
PTPN13-204ENST00000436978 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.94□□□□□ -0.82
PTPN13-204ENST00000436978 TRANK1O15050 2925 aa9.93□□□□□ -0.82
PTPN13-204ENST00000436978 LINC01554Q52M75 96 aa9.91□□□□□ -0.82
PTPN13-204ENST00000436978 PCNTO95613 3336 aa9.89□□□□□ -0.83
PTPN13-204ENST00000436978 OCR1Q9BZK8 76 aa9.88□□□□□ -0.83
PTPN13-204ENST00000436978 KMT2BQ9UMN6 2715 aaPredicted RBP9.88□□□□□ -0.83
PTPN13-204ENST00000436978 A0A0D9SG42 100 aa9.88□□□□□ -0.83
PTPN13-204ENST00000436978 PRR26Q8N8Z3 221 aa9.87□□□□□ -0.83
PTPN13-204ENST00000436978 KTN1-AS1Q86SY8 53 aa9.86□□□□□ -0.83
PTPN13-204ENST00000436978 Q1T7F1 81 aa9.83□□□□□ -0.84
PTPN13-204ENST00000436978 CENPEQ02224 2701 aa9.81□□□□□ -0.84
PTPN13-204ENST00000436978 SPRR1AP35321 89 aa9.79□□□□□ -0.84
PTPN13-204ENST00000436978 ZCCHC13Q8WW36 166 aaKnown RBP9.79□□□□□ -0.84
PTPN13-204ENST00000436978 M0R2T5 61 aa9.79□□□□□ -0.84
PTPN13-204ENST00000436978 S4R3F8 94 aa9.77□□□□□ -0.85
PTPN13-204ENST00000436978 HRES1P13985 223 aa9.76□□□□□ -0.85
PTPN13-204ENST00000436978 LCA10Q71F78 164 aa9.75□□□□□ -0.85
PTPN13-204ENST00000436978 CHD9Q3L8U1 2897 aa9.75□□□□□ -0.85
PTPN13-204ENST00000436978 AKAP13Q12802 2813 aa9.74□□□□□ -0.85
PTPN13-204ENST00000436978 A0A1B0GU33 70 aa9.74□□□□□ -0.85
PTPN13-204ENST00000436978 LINC00483Q53H64 154 aa9.73□□□□□ -0.85
PTPN13-204ENST00000436978 CAMK2N1Q7Z7J9 78 aa9.72□□□□□ -0.85
PTPN13-204ENST00000436978 MMP24-AS1A0A0U1RRL7 71 aa9.71□□□□□ -0.86
PTPN13-204ENST00000436978 SPRR1BP22528 89 aa9.71□□□□□ -0.86
PTPN13-204ENST00000436978 TEX15Q9BXT5 2789 aa9.7□□□□□ -0.86
PTPN13-204ENST00000436978 ZNF292O60281 2723 aa9.7□□□□□ -0.86
PTPN13-204ENST00000436978 CSAG1Q6PB30 78 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms