RNA–Protein interactions for RNA: ENST00000435495.6

PTPN12-206, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2 BASIC

Gene PTPN12, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-206ENST00000435495 ARL14EPLP0DKL9 152 aa2.25□□□□□ -2.05
PTPN12-206ENST00000435495 FRYQ5TBA9 3013 aa2.25□□□□□ -2.05
PTPN12-206ENST00000435495 LAMA1P25391 3075 aa2.24□□□□□ -2.05
PTPN12-206ENST00000435495 NDUFA4O00483 81 aa2.24□□□□□ -2.05
PTPN12-206ENST00000435495 CACNA1GO43497 2377 aa2.24□□□□□ -2.05
PTPN12-206ENST00000435495 ZZEF1O43149 2961 aa2.24□□□□□ -2.05
PTPN12-206ENST00000435495 CEP295Q9C0D2 2601 aa2.24□□□□□ -2.05
PTPN12-206ENST00000435495 FAM208BQ5VWN6 2430 aa2.24□□□□□ -2.05
PTPN12-206ENST00000435495 ASPMQ8IZT6 3477 aa2.24□□□□□ -2.05
PTPN12-206ENST00000435495 SPEGQ15772 3267 aa2.24□□□□□ -2.05
PTPN12-206ENST00000435495 I3L3M4 83 aa2.24□□□□□ -2.05
PTPN12-206ENST00000435495 SPINK4O60575 86 aa2.24□□□□□ -2.05
PTPN12-206ENST00000435495 PLNP26678 52 aa2.24□□□□□ -2.05
PTPN12-206ENST00000435495 CNOT1A5YKK6 2376 aaKnown RBP2.24□□□□□ -2.05
PTPN12-206ENST00000435495 IGIPA6NJ69 53 aa2.23□□□□□ -2.05
PTPN12-206ENST00000435495 PRB2P02812 416 aaPredicted RBP2.23□□□□□ -2.05
PTPN12-206ENST00000435495 DEFB124Q8NES8 71 aa2.23□□□□□ -2.05
PTPN12-206ENST00000435495 TIMM8BQ9Y5J9 83 aaPredicted RBP2.23□□□□□ -2.05
PTPN12-206ENST00000435495 DMXL2Q8TDJ6 3036 aa2.22□□□□□ -2.05
PTPN12-206ENST00000435495 COX6B1P14854 86 aa2.22□□□□□ -2.05
PTPN12-206ENST00000435495 SERF2P84101 59 aa2.22□□□□□ -2.05
PTPN12-206ENST00000435495 WDFY3Q8IZQ1 3526 aa2.22□□□□□ -2.05
PTPN12-206ENST00000435495 PRR9Q5T870 116 aa2.22□□□□□ -2.05
PTPN12-206ENST00000435495 Q6ZQY7 126 aa2.22□□□□□ -2.05
PTPN12-206ENST00000435495 FREM2Q5SZK8 3169 aa2.22□□□□□ -2.05
PTPN12-206ENST00000435495 DSPP15924 2871 aaKnown RBP2.21□□□□□ -2.05
PTPN12-206ENST00000435495 NBEAQ8NFP9 2946 aa2.21□□□□□ -2.05
PTPN12-206ENST00000435495 IGF2RP11717 2491 aa2.21□□□□□ -2.06
PTPN12-206ENST00000435495 ANKRD11Q6UB99 2663 aaPredicted RBP2.21□□□□□ -2.06
PTPN12-206ENST00000435495 ASCC3Q8N3C0 2202 aaKnown RBP2.21□□□□□ -2.06
PTPN12-206ENST00000435495 ZFYVE26Q68DK2 2539 aa2.21□□□□□ -2.06
PTPN12-206ENST00000435495 AKAP13Q12802 2813 aa2.21□□□□□ -2.06
PTPN12-206ENST00000435495 IGKV2-28A0A075B6P5 120 aa2.21□□□□□ -2.06
PTPN12-206ENST00000435495 IGKV2D-28P01615 120 aa2.21□□□□□ -2.06
PTPN12-206ENST00000435495 COX7BP24311 80 aa2.21□□□□□ -2.06
PTPN12-206ENST00000435495 DEFB119Q8N690 84 aa2.21□□□□□ -2.06
PTPN12-206ENST00000435495 LAMA5O15230 3695 aa2.2□□□□□ -2.06
PTPN12-206ENST00000435495 LOC400499M0QZD8 3231 aa2.2□□□□□ -2.06
PTPN12-206ENST00000435495 ITPR1Q14643 2758 aa2.2□□□□□ -2.06
PTPN12-206ENST00000435495 A0A1B0GVY2 172 aa2.2□□□□□ -2.06
PTPN12-206ENST00000435495 FASNP49327 2511 aaKnown RBP2.2□□□□□ -2.06
PTPN12-206ENST00000435495 G3V318 75 aa2.2□□□□□ -2.06
PTPN12-206ENST00000435495 KRTAP5-9P26371 169 aa2.2□□□□□ -2.06
PTPN12-206ENST00000435495 SSBP3-AS1Q7Z2R9 100 aa2.2□□□□□ -2.06
PTPN12-206ENST00000435495 SMG1Q96Q15 3661 aaKnown RBP2.19□□□□□ -2.06
PTPN12-206ENST00000435495 IGKV2-24A0A0C4DH68 120 aa2.19□□□□□ -2.06
PTPN12-206ENST00000435495 SNRPGP62308 76 aaKnown RBP2.19□□□□□ -2.06
PTPN12-206ENST00000435495 HAMPP81172 84 aa2.19□□□□□ -2.06
PTPN12-206ENST00000435495 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.19□□□□□ -2.06
PTPN12-206ENST00000435495 CACNA1EQ15878 2313 aa2.19□□□□□ -2.06
PTPN12-206ENST00000435495 Q6ZRX8 168 aa2.19□□□□□ -2.06
PTPN12-206ENST00000435495 URB1O60287 2271 aaKnown RBP2.18□□□□□ -2.06
PTPN12-206ENST00000435495 GOLGA4Q13439 2230 aaKnown RBP2.18□□□□□ -2.06
PTPN12-206ENST00000435495 GCN1Q92616 2671 aaKnown RBP2.18□□□□□ -2.06
PTPN12-206ENST00000435495 IGSF10Q6WRI0 2623 aa2.18□□□□□ -2.06
PTPN12-206ENST00000435495 CELSR3Q9NYQ7 3312 aa2.18□□□□□ -2.06
PTPN12-206ENST00000435495 KALRNO60229 2985 aa2.17□□□□□ -2.06
PTPN12-206ENST00000435495 ASH1LQ9NR48 2969 aaKnown RBP2.17□□□□□ -2.06
PTPN12-206ENST00000435495 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
PTPN12-206ENST00000435495 LINC01546A6NGU7 62 aa2.17□□□□□ -2.06
PTPN12-206ENST00000435495 APC2O95996 2303 aa2.17□□□□□ -2.06
PTPN12-206ENST00000435495 ACACAQ13085 2346 aa2.17□□□□□ -2.06
PTPN12-206ENST00000435495 SETXQ7Z333 2677 aaKnown RBP2.17□□□□□ -2.06
PTPN12-206ENST00000435495 FLNBO75369 2602 aaKnown RBP2.17□□□□□ -2.06
PTPN12-206ENST00000435495 PRB1P04280 392 aa2.17□□□□□ -2.06
PTPN12-206ENST00000435495 BPTFQ12830 3046 aa2.16□□□□□ -2.06
PTPN12-206ENST00000435495 HELZ2Q9BYK8 2649 aaKnown RBP2.16□□□□□ -2.06
PTPN12-206ENST00000435495 A0A096LNT2 108 aa2.16□□□□□ -2.06
PTPN12-206ENST00000435495 J3QKU1 62 aa2.16□□□□□ -2.06
PTPN12-206ENST00000435495 PLAC4Q8WY50 150 aa2.16□□□□□ -2.06
PTPN12-206ENST00000435495 KRTAP10-3P60369 221 aa2.16□□□□□ -2.06
PTPN12-206ENST00000435495 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.16□□□□□ -2.06
PTPN12-206ENST00000435495 KNTC1P50748 2209 aa2.15□□□□□ -2.06
PTPN12-206ENST00000435495 GVQW2A0A096LPI5 108 aaPredicted RBP2.15□□□□□ -2.07
PTPN12-206ENST00000435495 KCNQ1DNQ9H478 68 aa2.15□□□□□ -2.07
PTPN12-206ENST00000435495 AHCTF1Q8WYP5 2266 aa2.15□□□□□ -2.07
PTPN12-206ENST00000435495 CFAP46Q8IYW2 2715 aa2.15□□□□□ -2.07
PTPN12-206ENST00000435495 ATMQ13315 3056 aa2.14□□□□□ -2.07
PTPN12-206ENST00000435495 TENM4Q6N022 2769 aa2.14□□□□□ -2.07
PTPN12-206ENST00000435495 ETDCA0A1B0GVM5 59 aa2.14□□□□□ -2.07
PTPN12-206ENST00000435495 NCR3O14931 201 aa2.14□□□□□ -2.07
PTPN12-206ENST00000435495 NDUFA3O95167 84 aa2.14□□□□□ -2.07
PTPN12-206ENST00000435495 KNL1Q8NG31 2342 aa2.14□□□□□ -2.07
PTPN12-206ENST00000435495 MGAQ8IWI9 3026 aa2.14□□□□□ -2.07
PTPN12-206ENST00000435495 SMIM11BQ8TCY0 68 aa2.14□□□□□ -2.07
PTPN12-206ENST00000435495 PTPRQQ9UMZ3 2332 aa2.13□□□□□ -2.07
PTPN12-206ENST00000435495 MAST4O15021 2626 aa2.13□□□□□ -2.07
PTPN12-206ENST00000435495 FXYD6P3P58550 94 aa2.13□□□□□ -2.07
PTPN12-206ENST00000435495 SPTY2D1-AS1A0A0U1RR47 76 aa2.13□□□□□ -2.07
PTPN12-206ENST00000435495 DEFB114Q30KQ6 69 aa2.13□□□□□ -2.07
PTPN12-206ENST00000435495 IGFL1Q6UW32 110 aa2.13□□□□□ -2.07
PTPN12-206ENST00000435495 U3KQA8 63 aa2.13□□□□□ -2.07
PTPN12-206ENST00000435495 LY6G6CO95867 125 aa2.12□□□□□ -2.07
PTPN12-206ENST00000435495 DEFB133Q30KQ1 61 aa2.12□□□□□ -2.07
PTPN12-206ENST00000435495 MYO18BQ8IUG5 2567 aa2.12□□□□□ -2.07
PTPN12-206ENST00000435495 COL6A6A6NMZ7 2263 aa2.12□□□□□ -2.07
PTPN12-206ENST00000435495 HECTD1Q9ULT8 2610 aa2.12□□□□□ -2.07
PTPN12-206ENST00000435495 CPSF4LA6NMK7 179 aaKnown RBP2.12□□□□□ -2.07
PTPN12-206ENST00000435495 DEFB106AQ8N104 65 aa2.12□□□□□ -2.07
PTPN12-206ENST00000435495 SPTA1P02549 2419 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms