RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 LINC00337Q8N6G1 96 aa14.81□□□□□ -0.04
VEGFA-209ENST00000425836 OR13C6PQ8NH95 151 aa14.8□□□□□ -0.04
VEGFA-209ENST00000425836 KRTAP4-16G5E9R7 235 aaPredicted RBP14.79□□□□□ -0.04
VEGFA-209ENST00000425836 HIGD1BQ9P298 99 aa14.79□□□□□ -0.04
VEGFA-209ENST00000425836 C2orf91Q6ZV80 131 aa14.78□□□□□ -0.04
VEGFA-209ENST00000425836 HIST1H4GQ99525 98 aa14.78□□□□□ -0.04
VEGFA-209ENST00000425836 TRAV23DV6A0A075B6W5 121 aa14.77□□□□□ -0.04
VEGFA-209ENST00000425836 ETDCA0A1B0GVM5 59 aa14.75□□□□□ -0.05
VEGFA-209ENST00000425836 LINC01600Q96MT4 127 aa14.74□□□□□ -0.05
VEGFA-209ENST00000425836 A4D1N5 150 aa14.73□□□□□ -0.05
VEGFA-209ENST00000425836 CBY1Q9Y3M2 126 aa14.73□□□□□ -0.05
VEGFA-209ENST00000425836 ZNF73O43830 326 aaPredicted RBP14.73□□□□□ -0.05
VEGFA-209ENST00000425836 B5MCH6 92 aa14.72□□□□□ -0.05
VEGFA-209ENST00000425836 J3QL48 77 aa14.72□□□□□ -0.05
VEGFA-209ENST00000425836 A6NDN8 102 aa14.71□□□□□ -0.05
VEGFA-209ENST00000425836 KRTAP1-4P0C5Y4 121 aa14.7□□□□□ -0.06
VEGFA-209ENST00000425836 HIGD2AQ9BW72 106 aa14.7□□□□□ -0.06
VEGFA-209ENST00000425836 TRAV13-2A0A0B4J235 113 aa14.69□□□□□ -0.06
VEGFA-209ENST00000425836 MT1HL1P0DM35 61 aa14.68□□□□□ -0.06
VEGFA-209ENST00000425836 Q6ZRX8 168 aa14.66□□□□□ -0.06
VEGFA-209ENST00000425836 UQCR10Q9UDW1 63 aa14.66□□□□□ -0.06
VEGFA-209ENST00000425836 TAL2Q16559 108 aa14.65□□□□□ -0.06
VEGFA-209ENST00000425836 SMCR5Q8TEV8 140 aa14.64□□□□□ -0.07
VEGFA-209ENST00000425836 HINT1P49773 126 aaPredicted RBP14.63□□□□□ -0.07
VEGFA-209ENST00000425836 C6orf99Q4VX62 202 aa14.63□□□□□ -0.07
VEGFA-209ENST00000425836 Q9BRP9 147 aa14.63□□□□□ -0.07
VEGFA-209ENST00000425836 KRTAP10-8P60410 259 aa14.62□□□□□ -0.07
VEGFA-209ENST00000425836 CEND1Q8N111 149 aa14.62□□□□□ -0.07
VEGFA-209ENST00000425836 PRR26Q8N8Z3 221 aa14.6□□□□□ -0.07
VEGFA-209ENST00000425836 PRO1933Q9H354 126 aa14.6□□□□□ -0.07
VEGFA-209ENST00000425836 TNXBP22105 4242 aa14.6□□□□□ -0.07
VEGFA-209ENST00000425836 ANAPC11Q9NYG5 84 aa14.6□□□□□ -0.07
VEGFA-209ENST00000425836 ERC2-IT1O76042 136 aa14.59□□□□□ -0.07
VEGFA-209ENST00000425836 SMIM11BQ8TCY0 68 aa14.59□□□□□ -0.07
VEGFA-209ENST00000425836 CFC1BP0CG36 223 aa14.58□□□□□ -0.08
VEGFA-209ENST00000425836 CFC1P0CG37 223 aa14.58□□□□□ -0.08
VEGFA-209ENST00000425836 COX7BP24311 80 aa14.56□□□□□ -0.08
VEGFA-209ENST00000425836 ELOF1P60002 83 aaKnown RBP14.56□□□□□ -0.08
VEGFA-209ENST00000425836 HSD52Q0P140 79 aa14.56□□□□□ -0.08
VEGFA-209ENST00000425836 TRBV7-6A0A0J9YX20 115 aa14.56□□□□□ -0.08
VEGFA-209ENST00000425836 RPL13AP40429 203 aaKnown RBP14.56□□□□□ -0.08
VEGFA-209ENST00000425836 SPRR4Q96PI1 79 aa14.56□□□□□ -0.08
VEGFA-209ENST00000425836 DMBT1Q9UGM3 2413 aaPredicted RBP14.55□□□□□ -0.08
VEGFA-209ENST00000425836 FXYD2P54710 66 aa14.55□□□□□ -0.08
VEGFA-209ENST00000425836 TSTD3H0UI37 97 aa14.54□□□□□ -0.08
VEGFA-209ENST00000425836 A0A087X002 238 aa14.53□□□□□ -0.08
VEGFA-209ENST00000425836 ZNF706Q9Y5V0 76 aaPredicted RBP14.53□□□□□ -0.08
VEGFA-209ENST00000425836 A0A0B4J2C4 111 aa14.52□□□□□ -0.08
VEGFA-209ENST00000425836 RAB37Q96AX2 223 aa14.52□□□□□ -0.08
VEGFA-209ENST00000425836 TMEM238LA0A1B0GVL6 79 aa14.51□□□□□ -0.09
VEGFA-209ENST00000425836 A6NJY4 79 aa14.51□□□□□ -0.09
VEGFA-209ENST00000425836 CRYGAP11844 174 aa14.51□□□□□ -0.09
VEGFA-209ENST00000425836 FAM229BQ4G0N7 80 aa14.51□□□□□ -0.09
VEGFA-209ENST00000425836 A0A1B0GWB2 263 aa14.51□□□□□ -0.09
VEGFA-209ENST00000425836 DHRS4-AS1Q9P1J3 65 aa14.51□□□□□ -0.09
VEGFA-209ENST00000425836 HERC1Q15751 4861 aa14.5□□□□□ -0.09
VEGFA-209ENST00000425836 H7C2G1 150 aa14.47□□□□□ -0.09
VEGFA-209ENST00000425836 KRTAP13-2Q52LG2 175 aa14.46□□□□□ -0.09
VEGFA-209ENST00000425836 GAGE2AQ6NT46 116 aa14.46□□□□□ -0.09
VEGFA-209ENST00000425836 ST20-AS1Q8NBB2 130 aa14.46□□□□□ -0.09
VEGFA-209ENST00000425836 LINC00483Q53H64 154 aa14.45□□□□□ -0.1
VEGFA-209ENST00000425836 VAMP3Q15836 100 aa14.44□□□□□ -0.1
VEGFA-209ENST00000425836 PRO1854Q9UHT4 67 aa14.44□□□□□ -0.1
VEGFA-209ENST00000425836 NHP2Q9NX24 153 aaKnown RBP14.43□□□□□ -0.1
VEGFA-209ENST00000425836 TYMSOSQ8TAI1 123 aa14.42□□□□□ -0.1
VEGFA-209ENST00000425836 BVES-AS1Q5T3Y7 98 aa14.41□□□□□ -0.1
VEGFA-209ENST00000425836 CTAG1AP78358 180 aa14.39□□□□□ -0.11
VEGFA-209ENST00000425836 C3orf22Q8N5N4 141 aa14.39□□□□□ -0.11
VEGFA-209ENST00000425836 PCP4L1A6NKN8 68 aa14.38□□□□□ -0.11
VEGFA-209ENST00000425836 K7ERJ3 54 aa14.38□□□□□ -0.11
VEGFA-209ENST00000425836 LINC00575Q6W349 94 aa14.38□□□□□ -0.11
VEGFA-209ENST00000425836 Q1RN00 199 aa14.37□□□□□ -0.11
VEGFA-209ENST00000425836 SLC25A20O43772 301 aa14.34□□□□□ -0.11
VEGFA-209ENST00000425836 SPRR1BP22528 89 aa14.34□□□□□ -0.11
VEGFA-209ENST00000425836 hADV29S1A0JD25 119 aa14.31□□□□□ -0.12
VEGFA-209ENST00000425836 DEFB105AQ8NG35 78 aa14.31□□□□□ -0.12
VEGFA-209ENST00000425836 M0R143 59 aa14.3□□□□□ -0.12
VEGFA-209ENST00000425836 LINC01547P58512 204 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-209ENST00000425836 IGLV9-49A0A0B4J1Y8 123 aa14.29□□□□□ -0.12
VEGFA-209ENST00000425836 H0YGX0 51 aa14.29□□□□□ -0.12
VEGFA-209ENST00000425836 IGLV5-48A0A075B6I7 105 aa14.28□□□□□ -0.12
VEGFA-209ENST00000425836 TEX49A0A1B0GTD5 131 aa14.28□□□□□ -0.12
VEGFA-209ENST00000425836 TRIAP1O43715 76 aa14.27□□□□□ -0.12
VEGFA-209ENST00000425836 TSPAN13O95857 204 aa14.26□□□□□ -0.13
VEGFA-209ENST00000425836 MOBPQ13875 183 aa14.26□□□□□ -0.13
VEGFA-209ENST00000425836 Q6ZQY7 126 aa14.25□□□□□ -0.13
VEGFA-209ENST00000425836 LINC00304Q8N9R0 145 aa14.25□□□□□ -0.13
VEGFA-209ENST00000425836 FAM218AQ96MZ4 157 aa14.25□□□□□ -0.13
VEGFA-209ENST00000425836 Q8N377 158 aa14.23□□□□□ -0.13
VEGFA-209ENST00000425836 LAMTOR3Q9UHA4 124 aa14.23□□□□□ -0.13
VEGFA-209ENST00000425836 PSMB2P49721 201 aa14.22□□□□□ -0.13
VEGFA-209ENST00000425836 Q8NBF4 154 aa14.22□□□□□ -0.13
VEGFA-209ENST00000425836 SSBP3-AS1Q7Z2R9 100 aa14.22□□□□□ -0.13
VEGFA-209ENST00000425836 SMIM29Q86T20 159 aa14.22□□□□□ -0.13
VEGFA-209ENST00000425836 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.21□□□□□ -0.14
VEGFA-209ENST00000425836 C9orf153Q5TBE3 101 aa14.2□□□□□ -0.14
VEGFA-209ENST00000425836 SNCGO76070 127 aa14.17□□□□□ -0.14
VEGFA-209ENST00000425836 COX6CP09669 75 aa14.17□□□□□ -0.14
VEGFA-209ENST00000425836 CLEC2BQ92478 149 aa14.17□□□□□ -0.14
VEGFA-209ENST00000425836 A0A1B0GX51 115 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 150.9 ms