RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 C3orf84H3BNL1 204 aa4.97□□□□□ -1.61
SMARCC1-202ENST00000425518 LINC00528Q8N1L1 170 aa4.97□□□□□ -1.61
SMARCC1-202ENST00000425518 MGAM2Q2M2H8 2515 aa4.96□□□□□ -1.62
SMARCC1-202ENST00000425518 F8WEM9 126 aa4.96□□□□□ -1.62
SMARCC1-202ENST00000425518 NREPQ16612 68 aa4.96□□□□□ -1.62
SMARCC1-202ENST00000425518 KRTAP26-1Q6PEX3 210 aa4.96□□□□□ -1.62
SMARCC1-202ENST00000425518 NKAPP1Q8N9T2 125 aa4.96□□□□□ -1.62
SMARCC1-202ENST00000425518 SYCNQ0VAF6 134 aa4.95□□□□□ -1.62
SMARCC1-202ENST00000425518 TENM3Q9P273 2699 aa4.95□□□□□ -1.62
SMARCC1-202ENST00000425518 TRBV7-6A0A0J9YX20 115 aa4.95□□□□□ -1.62
SMARCC1-202ENST00000425518 BCE1O60756 84 aa4.95□□□□□ -1.62
SMARCC1-202ENST00000425518 NOTCH1P46531 2555 aa4.95□□□□□ -1.62
SMARCC1-202ENST00000425518 RPL37AP8A6NKH3 93 aa4.94□□□□□ -1.62
SMARCC1-202ENST00000425518 BPY2O14599 106 aa4.94□□□□□ -1.62
SMARCC1-202ENST00000425518 SERTAD4-AS1Q5TG53 156 aa4.94□□□□□ -1.62
SMARCC1-202ENST00000425518 KLKP1Q107X0 134 aa4.94□□□□□ -1.62
SMARCC1-202ENST00000425518 Q5XG85 94 aa4.94□□□□□ -1.62
SMARCC1-202ENST00000425518 C7orf33Q8WU49 177 aa4.93□□□□□ -1.62
SMARCC1-202ENST00000425518 DEFB131BA0A096LNP1 70 aa4.93□□□□□ -1.62
SMARCC1-202ENST00000425518 SERP1Q9Y6X1 66 aa4.92□□□□□ -1.62
SMARCC1-202ENST00000425518 KRTAP10-11P60412 298 aa4.92□□□□□ -1.62
SMARCC1-202ENST00000425518 Q8N377 158 aa4.92□□□□□ -1.62
SMARCC1-202ENST00000425518 COL6A5A8TX70 2615 aa4.92□□□□□ -1.62
SMARCC1-202ENST00000425518 FAM168BA1KXE4 195 aa4.91□□□□□ -1.62
SMARCC1-202ENST00000425518 H3BNG1 76 aa4.91□□□□□ -1.62
SMARCC1-202ENST00000425518 C11orf45Q8TAV5 145 aa4.91□□□□□ -1.62
SMARCC1-202ENST00000425518 TMEM254Q8TBM7 123 aa4.91□□□□□ -1.62
SMARCC1-202ENST00000425518 IGKV4-1P06312 121 aa4.9□□□□□ -1.62
SMARCC1-202ENST00000425518 LINC01556Q5JQF7 62 aa4.9□□□□□ -1.62
SMARCC1-202ENST00000425518 KCNQ1DNQ9H478 68 aa4.9□□□□□ -1.62
SMARCC1-202ENST00000425518 NBEAL1Q6ZS30 2694 aa4.9□□□□□ -1.62
SMARCC1-202ENST00000425518 ST20-AS1Q8NBB2 130 aa4.9□□□□□ -1.63
SMARCC1-202ENST00000425518 ETDCA0A1B0GVM5 59 aa4.9□□□□□ -1.63
SMARCC1-202ENST00000425518 FUSP35637 526 aaKnown RBP eCLIP4.89□□□□□ -1.63
SMARCC1-202ENST00000425518 CASC10Q5T4H9 136 aa4.89□□□□□ -1.63
SMARCC1-202ENST00000425518 NDUFC1O43677 76 aa4.88□□□□□ -1.63
SMARCC1-202ENST00000425518 WIPF1O43516 503 aa4.88□□□□□ -1.63
SMARCC1-202ENST00000425518 FAM30AQ9NZY2 134 aa4.88□□□□□ -1.63
SMARCC1-202ENST00000425518 UBE2BP63146 152 aa4.87□□□□□ -1.63
SMARCC1-202ENST00000425518 C1orf137Q5JT78 98 aa4.87□□□□□ -1.63
SMARCC1-202ENST00000425518 Q9BRP9 147 aa4.87□□□□□ -1.63
SMARCC1-202ENST00000425518 LINC00474Q9P2X8 69 aa4.87□□□□□ -1.63
SMARCC1-202ENST00000425518 FBN1P35555 2871 aaKnown RBP4.87□□□□□ -1.63
SMARCC1-202ENST00000425518 A0A1W2PNM2 257 aa4.87□□□□□ -1.63
SMARCC1-202ENST00000425518 Q6ZRX8 168 aa4.87□□□□□ -1.63
SMARCC1-202ENST00000425518 HIGD2AQ9BW72 106 aa4.87□□□□□ -1.63
SMARCC1-202ENST00000425518 DHRS4-AS1Q9P1J3 65 aa4.87□□□□□ -1.63
SMARCC1-202ENST00000425518 IGLV5-48A0A075B6I7 105 aa4.86□□□□□ -1.63
SMARCC1-202ENST00000425518 SMIM26A0A096LP01 95 aa4.86□□□□□ -1.63
SMARCC1-202ENST00000425518 OCR1Q9BZK8 76 aa4.86□□□□□ -1.63
SMARCC1-202ENST00000425518 ERC2-IT1O76042 136 aa4.86□□□□□ -1.63
SMARCC1-202ENST00000425518 SMIM29Q86T20 159 aa4.86□□□□□ -1.63
SMARCC1-202ENST00000425518 PRB2P02812 416 aaPredicted RBP4.86□□□□□ -1.63
SMARCC1-202ENST00000425518 IGLV1-50A0A075B6I6 118 aa4.85□□□□□ -1.63
SMARCC1-202ENST00000425518 A0A0G2JQZ4 141 aa4.85□□□□□ -1.63
SMARCC1-202ENST00000425518 A0A1W2PNN7 141 aa4.85□□□□□ -1.63
SMARCC1-202ENST00000425518 EPM2AB3EWF7 344 aa4.85□□□□□ -1.63
SMARCC1-202ENST00000425518 F8WDY8 70 aa4.85□□□□□ -1.63
SMARCC1-202ENST00000425518 PRYO14603 147 aa4.85□□□□□ -1.63
SMARCC1-202ENST00000425518 FP248Q71RG6 208 aaPredicted RBP4.85□□□□□ -1.63
SMARCC1-202ENST00000425518 MRAPQ8TCY5 172 aa4.85□□□□□ -1.63
SMARCC1-202ENST00000425518 DNAH10OSP0CZ25 163 aa4.85□□□□□ -1.63
SMARCC1-202ENST00000425518 LINC00588Q9Y4M8 146 aa4.85□□□□□ -1.63
SMARCC1-202ENST00000425518 LINC00336Q6ZUF6 198 aa4.84□□□□□ -1.63
SMARCC1-202ENST00000425518 MPLKIPQ8TAP9 179 aa4.84□□□□□ -1.63
SMARCC1-202ENST00000425518 A0A0U1RQV1 116 aa4.84□□□□□ -1.64
SMARCC1-202ENST00000425518 MRPL55Q7Z7F7 128 aaKnown RBP4.84□□□□□ -1.64
SMARCC1-202ENST00000425518 KRTAP7-1Q8IUC3 87 aa4.84□□□□□ -1.64
SMARCC1-202ENST00000425518 Q8NBF4 154 aa4.83□□□□□ -1.64
SMARCC1-202ENST00000425518 KRTAP4-16G5E9R7 235 aaPredicted RBP4.83□□□□□ -1.64
SMARCC1-202ENST00000425518 TLX1NBP0CAT3 122 aa4.83□□□□□ -1.64
SMARCC1-202ENST00000425518 DEFB116Q30KQ4 102 aa4.83□□□□□ -1.64
SMARCC1-202ENST00000425518 CMYA5Q8N3K9 4069 aa4.83□□□□□ -1.64
SMARCC1-202ENST00000425518 ANK2Q01484 3957 aa4.83□□□□□ -1.64
SMARCC1-202ENST00000425518 IGKV2-24A0A0C4DH68 120 aa4.82□□□□□ -1.64
SMARCC1-202ENST00000425518 ATP5EP56381 51 aaPredicted RBP4.82□□□□□ -1.64
SMARCC1-202ENST00000425518 FAM229BQ4G0N7 80 aa4.82□□□□□ -1.64
SMARCC1-202ENST00000425518 PLA2G2DQ9UNK4 145 aa4.82□□□□□ -1.64
SMARCC1-202ENST00000425518 K7EQZ3 153 aa4.81□□□□□ -1.64
SMARCC1-202ENST00000425518 SPRR1AP35321 89 aa4.81□□□□□ -1.64
SMARCC1-202ENST00000425518 TNP2Q05952 138 aa4.81□□□□□ -1.64
SMARCC1-202ENST00000425518 LRCOL1A6NCL2 159 aa4.81□□□□□ -1.64
SMARCC1-202ENST00000425518 DSCR10P59022 87 aa4.81□□□□□ -1.64
SMARCC1-202ENST00000425518 REG3GQ6UW15 175 aa4.81□□□□□ -1.64
SMARCC1-202ENST00000425518 PRLHP81277 87 aa4.8□□□□□ -1.64
SMARCC1-202ENST00000425518 KRTAP24-1Q3LI83 254 aa4.8□□□□□ -1.64
SMARCC1-202ENST00000425518 LINC00476Q8WZB0 136 aa4.8□□□□□ -1.64
SMARCC1-202ENST00000425518 IGLV5-37A0A075B6J1 123 aa4.8□□□□□ -1.64
SMARCC1-202ENST00000425518 PRR4Q16378 134 aa4.79□□□□□ -1.64
SMARCC1-202ENST00000425518 A0A1B0GW54 56 aa4.79□□□□□ -1.64
SMARCC1-202ENST00000425518 SPRR4Q96PI1 79 aa4.79□□□□□ -1.64
SMARCC1-202ENST00000425518 WFDC13Q8IUB5 93 aa4.78□□□□□ -1.64
SMARCC1-202ENST00000425518 BRK1Q8WUW1 75 aa4.78□□□□□ -1.64
SMARCC1-202ENST00000425518 A0A087WSZ3 146 aa4.77□□□□□ -1.65
SMARCC1-202ENST00000425518 PSCAO43653 123 aa4.77□□□□□ -1.65
SMARCC1-202ENST00000425518 PRO0628Q9UI54 55 aa4.77□□□□□ -1.65
SMARCC1-202ENST00000425518 SRRM2Q9UQ35 2752 aaKnown RBP4.77□□□□□ -1.65
SMARCC1-202ENST00000425518 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.77□□□□□ -1.65
SMARCC1-202ENST00000425518 IGFL1Q6UW32 110 aa4.77□□□□□ -1.65
SMARCC1-202ENST00000425518 STAB2Q8WWQ8 2551 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms