RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 LGALS3P17931 250 aaKnown RBP10.08□□□□□ -0.8
GPC1-203ENST00000425056 C4orf48Q5BLP8 95 aa10.08□□□□□ -0.8
GPC1-203ENST00000425056 SMCR5Q8TEV8 140 aa10.08□□□□□ -0.8
GPC1-203ENST00000425056 KRTAP9-2Q9BYQ4 174 aa10.08□□□□□ -0.8
GPC1-203ENST00000425056 NMUP48645 174 aa10.07□□□□□ -0.8
GPC1-203ENST00000425056 LINC00483Q53H64 154 aa10.07□□□□□ -0.8
GPC1-203ENST00000425056 DAND5Q8N907 189 aa10.07□□□□□ -0.8
GPC1-203ENST00000425056 TSPEAR-AS2P59090 65 aa10.06□□□□□ -0.8
GPC1-203ENST00000425056 PYY3Q5JQD4 70 aa10.06□□□□□ -0.8
GPC1-203ENST00000425056 LOC107984156A0A0G2JMH3 177 aa10.05□□□□□ -0.8
GPC1-203ENST00000425056 ARL17AQ8IVW1 177 aa10.05□□□□□ -0.8
GPC1-203ENST00000425056 SPINK1P00995 79 aa10.04□□□□□ -0.8
GPC1-203ENST00000425056 S100A12P80511 92 aa10.04□□□□□ -0.8
GPC1-203ENST00000425056 ANKRD39Q53RE8 183 aa10.04□□□□□ -0.8
GPC1-203ENST00000425056 TRBV10-2A0A0K0K1G8 114 aa10.03□□□□□ -0.8
GPC1-203ENST00000425056 B5MCH6 92 aa10.03□□□□□ -0.8
GPC1-203ENST00000425056 KRTAP13-3Q3SY46 172 aa10.03□□□□□ -0.8
GPC1-203ENST00000425056 VAMP8Q9BV40 100 aa10.03□□□□□ -0.8
GPC1-203ENST00000425056 LOC105371267A0A1B0GV96 52 aa10.02□□□□□ -0.81
GPC1-203ENST00000425056 DDTP30046 118 aa10.01□□□□□ -0.81
GPC1-203ENST00000425056 GAGE2AQ6NT46 116 aa10.01□□□□□ -0.81
GPC1-203ENST00000425056 ERC2-IT1O76042 136 aa10□□□□□ -0.81
GPC1-203ENST00000425056 Q9BRP9 147 aa10□□□□□ -0.81
GPC1-203ENST00000425056 SPANXB1Q9NS25 103 aaPredicted RBP10□□□□□ -0.81
GPC1-203ENST00000425056 ZNF815PA8K554 130 aa9.99□□□□□ -0.81
GPC1-203ENST00000425056 SMIM6P0DI80 62 aa9.99□□□□□ -0.81
GPC1-203ENST00000425056 RPS29P62273 56 aaKnown RBP9.99□□□□□ -0.81
GPC1-203ENST00000425056 MOBPQ13875 183 aa9.99□□□□□ -0.81
GPC1-203ENST00000425056 Q6ZRX8 168 aa9.99□□□□□ -0.81
GPC1-203ENST00000425056 PAM16Q9Y3D7 125 aa9.99□□□□□ -0.81
GPC1-203ENST00000425056 SPATA45Q537H7 98 aa9.98□□□□□ -0.81
GPC1-203ENST00000425056 IGLV9-49A0A0B4J1Y8 123 aa9.97□□□□□ -0.81
GPC1-203ENST00000425056 NDUFC2O95298 119 aa9.97□□□□□ -0.81
GPC1-203ENST00000425056 ASB16-AS1Q495Z4 193 aa9.97□□□□□ -0.81
GPC1-203ENST00000425056 MIEN1Q9BRT3 115 aa9.97□□□□□ -0.81
GPC1-203ENST00000425056 IGLV6-57P01721 117 aa9.96□□□□□ -0.82
GPC1-203ENST00000425056 SSBP3-AS1Q7Z2R9 100 aa9.96□□□□□ -0.82
GPC1-203ENST00000425056 TTTY13Q9BZ97 58 aa9.96□□□□□ -0.82
GPC1-203ENST00000425056 A0A0J9YXY3 114 aa9.95□□□□□ -0.82
GPC1-203ENST00000425056 PCP2Q8IVA1 136 aa9.95□□□□□ -0.82
GPC1-203ENST00000425056 Q8N377 158 aa9.95□□□□□ -0.82
GPC1-203ENST00000425056 COX8AP10176 69 aa9.94□□□□□ -0.82
GPC1-203ENST00000425056 SCGB1D4Q6XE38 83 aa9.94□□□□□ -0.82
GPC1-203ENST00000425056 TIMM17BO60830 172 aa9.93□□□□□ -0.82
GPC1-203ENST00000425056 S100A7L2Q5SY68 101 aa9.93□□□□□ -0.82
GPC1-203ENST00000425056 TRAV23DV6A0A075B6W5 121 aa9.92□□□□□ -0.82
GPC1-203ENST00000425056 DLEU1O43261 78 aa9.92□□□□□ -0.82
GPC1-203ENST00000425056 SOSTDC1Q6X4U4 206 aa9.91□□□□□ -0.82
GPC1-203ENST00000425056 SLC25A20O43772 301 aa9.9□□□□□ -0.82
GPC1-203ENST00000425056 EIF4EBP3O60516 100 aaPredicted RBP9.9□□□□□ -0.82
GPC1-203ENST00000425056 SLC25A34Q6PIV7 304 aa9.9□□□□□ -0.82
GPC1-203ENST00000425056 C14orf144Q96I85 54 aa9.9□□□□□ -0.82
GPC1-203ENST00000425056 ZNF73O43830 326 aaPredicted RBP9.89□□□□□ -0.83
GPC1-203ENST00000425056 SEC61BP60468 96 aaKnown RBP9.89□□□□□ -0.83
GPC1-203ENST00000425056 ADAMTSL4-AS1Q5T5F5 129 aa9.88□□□□□ -0.83
GPC1-203ENST00000425056 LITAFQ99732 161 aa9.88□□□□□ -0.83
GPC1-203ENST00000425056 KRTAP4-1Q9BYQ7 146 aa9.88□□□□□ -0.83
GPC1-203ENST00000425056 NPC2P61916 151 aa9.87□□□□□ -0.83
GPC1-203ENST00000425056 C9orf153Q5TBE3 101 aa9.87□□□□□ -0.83
GPC1-203ENST00000425056 Q6ZVH6 145 aa9.87□□□□□ -0.83
GPC1-203ENST00000425056 COPS9Q8WXC6 57 aa9.86□□□□□ -0.83
GPC1-203ENST00000425056 SPANXDQ9BXN6 97 aa9.86□□□□□ -0.83
GPC1-203ENST00000425056 SPANXCQ9NY87 97 aa9.86□□□□□ -0.83
GPC1-203ENST00000425056 ST20-AS1Q8NBB2 130 aa9.85□□□□□ -0.83
GPC1-203ENST00000425056 C12orf57Q99622 126 aa9.85□□□□□ -0.83
GPC1-203ENST00000425056 CBY1Q9Y3M2 126 aa9.85□□□□□ -0.83
GPC1-203ENST00000425056 XP32Q5T750 250 aa9.84□□□□□ -0.83
GPC1-203ENST00000425056 HIGD1BQ9P298 99 aa9.84□□□□□ -0.83
GPC1-203ENST00000425056 IFITM1P13164 125 aa9.83□□□□□ -0.84
GPC1-203ENST00000425056 UQCR10Q9UDW1 63 aa9.83□□□□□ -0.84
GPC1-203ENST00000425056 HINT1P49773 126 aaPredicted RBP9.82□□□□□ -0.84
GPC1-203ENST00000425056 LINC00308Q8TCZ7 52 aa9.82□□□□□ -0.84
GPC1-203ENST00000425056 LINC01547P58512 204 aaPredicted RBP9.81□□□□□ -0.84
GPC1-203ENST00000425056 LINC00518Q8N0U6 118 aa9.81□□□□□ -0.84
GPC1-203ENST00000425056 KRTAP9-6A0A140TA67 174 aa9.8□□□□□ -0.84
GPC1-203ENST00000425056 SPRR1BP22528 89 aa9.8□□□□□ -0.84
GPC1-203ENST00000425056 C2orf91Q6ZV80 131 aa9.79□□□□□ -0.84
GPC1-203ENST00000425056 HIST1H4GQ99525 98 aa9.79□□□□□ -0.84
GPC1-203ENST00000425056 TSTD3H0UI37 97 aa9.78□□□□□ -0.84
GPC1-203ENST00000425056 PRO1933Q9H354 126 aa9.78□□□□□ -0.84
GPC1-203ENST00000425056 DHRS4-AS1Q9P1J3 65 aa9.78□□□□□ -0.84
GPC1-203ENST00000425056 TAL2Q16559 108 aa9.77□□□□□ -0.85
GPC1-203ENST00000425056 OR13C6PQ8NH95 151 aa9.77□□□□□ -0.85
GPC1-203ENST00000425056 MUSTN1Q8IVN3 82 aa9.76□□□□□ -0.85
GPC1-203ENST00000425056 LIMD2Q9BT23 127 aa9.75□□□□□ -0.85
GPC1-203ENST00000425056 ELOF1P60002 83 aaKnown RBP9.74□□□□□ -0.85
GPC1-203ENST00000425056 HSD52Q0P140 79 aa9.72□□□□□ -0.85
GPC1-203ENST00000425056 LAMTOR3Q9UHA4 124 aa9.72□□□□□ -0.85
GPC1-203ENST00000425056 COX7BP24311 80 aa9.71□□□□□ -0.86
GPC1-203ENST00000425056 C6orf99Q4VX62 202 aa9.71□□□□□ -0.86
GPC1-203ENST00000425056 TMEM238LA0A1B0GVL6 79 aa9.7□□□□□ -0.86
GPC1-203ENST00000425056 A6NJY4 79 aa9.7□□□□□ -0.86
GPC1-203ENST00000425056 HRCT1Q6UXD1 115 aa9.7□□□□□ -0.86
GPC1-203ENST00000425056 CEND1Q8N111 149 aa9.7□□□□□ -0.86
GPC1-203ENST00000425056 A4D1N5 150 aa9.69□□□□□ -0.86
GPC1-203ENST00000425056 CD164Q04900 197 aa9.67□□□□□ -0.86
GPC1-203ENST00000425056 LCE2CQ5TA81 110 aa9.67□□□□□ -0.86
GPC1-203ENST00000425056 TRAV13-2A0A0B4J235 113 aa9.66□□□□□ -0.86
GPC1-203ENST00000425056 TRBV7-6A0A0J9YX20 115 aa9.66□□□□□ -0.86
GPC1-203ENST00000425056 Q1RN00 199 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms