RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 PRLHP81277 87 aa8.32□□□□□ -1.08
PRPF39-202ENST00000424478 A0A1B0GWB2 263 aa8.31□□□□□ -1.08
PRPF39-202ENST00000424478 EPM2AB3EWF7 344 aa8.31□□□□□ -1.08
PRPF39-202ENST00000424478 LBHQ53QV2 105 aaPredicted RBP8.31□□□□□ -1.08
PRPF39-202ENST00000424478 C1orf137Q5JT78 98 aa8.3□□□□□ -1.08
PRPF39-202ENST00000424478 LINC00528Q8N1L1 170 aa8.3□□□□□ -1.08
PRPF39-202ENST00000424478 PPDPFQ9H3Y8 114 aa8.3□□□□□ -1.08
PRPF39-202ENST00000424478 BIRC6Q9NR09 4857 aa8.29□□□□□ -1.08
PRPF39-202ENST00000424478 TAX1BP3O14907 124 aa8.29□□□□□ -1.08
PRPF39-202ENST00000424478 ZNF73O43830 326 aaPredicted RBP8.29□□□□□ -1.08
PRPF39-202ENST00000424478 REG3GQ6UW15 175 aa8.29□□□□□ -1.08
PRPF39-202ENST00000424478 TRIAP1O43715 76 aa8.28□□□□□ -1.08
PRPF39-202ENST00000424478 PSMB2P49721 201 aa8.28□□□□□ -1.08
PRPF39-202ENST00000424478 KCNQ1DNQ9H478 68 aa8.28□□□□□ -1.08
PRPF39-202ENST00000424478 FAM19A1Q7Z5A9 133 aa8.28□□□□□ -1.08
PRPF39-202ENST00000424478 H3BUT2 72 aa8.27□□□□□ -1.09
PRPF39-202ENST00000424478 CLEC2BQ92478 149 aa8.26□□□□□ -1.09
PRPF39-202ENST00000424478 DIRC1Q969H9 104 aa8.25□□□□□ -1.09
PRPF39-202ENST00000424478 ETDCA0A1B0GVM5 59 aa8.24□□□□□ -1.09
PRPF39-202ENST00000424478 FAM218AQ96MZ4 157 aa8.24□□□□□ -1.09
PRPF39-202ENST00000424478 KRTAP4-16G5E9R7 235 aaPredicted RBP8.24□□□□□ -1.09
PRPF39-202ENST00000424478 PRYO14603 147 aa8.24□□□□□ -1.09
PRPF39-202ENST00000424478 COL5A1-AS1Q5SY13 56 aa8.24□□□□□ -1.09
PRPF39-202ENST00000424478 HIGD2AQ9BW72 106 aa8.24□□□□□ -1.09
PRPF39-202ENST00000424478 CDK2AP2O75956 126 aa8.24□□□□□ -1.09
PRPF39-202ENST00000424478 RPL28P46779 137 aaKnown RBP8.23□□□□□ -1.09
PRPF39-202ENST00000424478 UBE2AP49459 152 aa8.23□□□□□ -1.09
PRPF39-202ENST00000424478 Q9BRP9 147 aa8.23□□□□□ -1.09
PRPF39-202ENST00000424478 FLG2Q5D862 2391 aaPredicted RBP8.23□□□□□ -1.09
PRPF39-202ENST00000424478 ERC2-IT1O76042 136 aa8.22□□□□□ -1.09
PRPF39-202ENST00000424478 SPRR1AP35321 89 aa8.22□□□□□ -1.09
PRPF39-202ENST00000424478 RPL37AP61513 92 aaKnown RBP8.22□□□□□ -1.09
PRPF39-202ENST00000424478 B5MCH6 92 aa8.22□□□□□ -1.09
PRPF39-202ENST00000424478 SCGB1C2P0DMR2 95 aa8.22□□□□□ -1.09
PRPF39-202ENST00000424478 BCE1O60756 84 aa8.22□□□□□ -1.09
PRPF39-202ENST00000424478 COX7BP24311 80 aa8.21□□□□□ -1.1
PRPF39-202ENST00000424478 Q5VSD8 79 aa8.2□□□□□ -1.1
PRPF39-202ENST00000424478 C9orf118A6NHY6 69 aa8.2□□□□□ -1.1
PRPF39-202ENST00000424478 Q6ZRX8 168 aa8.2□□□□□ -1.1
PRPF39-202ENST00000424478 KRTAP4-5Q9BYR2 181 aa8.2□□□□□ -1.1
PRPF39-202ENST00000424478 IGLV7-43P04211 117 aa8.19□□□□□ -1.1
PRPF39-202ENST00000424478 ELOF1P60002 83 aaKnown RBP8.19□□□□□ -1.1
PRPF39-202ENST00000424478 SMCR5Q8TEV8 140 aa8.19□□□□□ -1.1
PRPF39-202ENST00000424478 ST20-AS1Q8NBB2 130 aa8.19□□□□□ -1.1
PRPF39-202ENST00000424478 KRTAP10-4P60372 401 aaPredicted RBP8.18□□□□□ -1.1
PRPF39-202ENST00000424478 ANAPC11Q9NYG5 84 aa8.18□□□□□ -1.1
PRPF39-202ENST00000424478 MTURNQ8N3F0 131 aa8.18□□□□□ -1.1
PRPF39-202ENST00000424478 MYCBP2O75592 4640 aa8.18□□□□□ -1.1
PRPF39-202ENST00000424478 KRTAP13-1Q8IUC0 172 aa8.17□□□□□ -1.1
PRPF39-202ENST00000424478 LRP1Q07954 4544 aaKnown RBP8.17□□□□□ -1.1
PRPF39-202ENST00000424478 TCL1BO95988 128 aa8.17□□□□□ -1.1
PRPF39-202ENST00000424478 A0A1W2PPM0 123 aa8.16□□□□□ -1.1
PRPF39-202ENST00000424478 DEFB105AQ8NG35 78 aa8.16□□□□□ -1.1
PRPF39-202ENST00000424478 FAM229AH3BQW9 127 aa8.15□□□□□ -1.1
PRPF39-202ENST00000424478 VAMP3Q15836 100 aa8.15□□□□□ -1.1
PRPF39-202ENST00000424478 ZNF861PO60384 105 aa8.15□□□□□ -1.11
PRPF39-202ENST00000424478 LINC00575Q6W349 94 aa8.15□□□□□ -1.11
PRPF39-202ENST00000424478 ABCA13Q86UQ4 5058 aa8.14□□□□□ -1.11
PRPF39-202ENST00000424478 HERC2O95714 4834 aa8.14□□□□□ -1.11
PRPF39-202ENST00000424478 COX6CP09669 75 aa8.14□□□□□ -1.11
PRPF39-202ENST00000424478 A0A1B0GV90 55 aa8.13□□□□□ -1.11
PRPF39-202ENST00000424478 Q6ZQY7 126 aa8.13□□□□□ -1.11
PRPF39-202ENST00000424478 A0A1B0GV72 72 aa8.12□□□□□ -1.11
PRPF39-202ENST00000424478 hADV29S1A0JD25 119 aa8.12□□□□□ -1.11
PRPF39-202ENST00000424478 H3BMG7 143 aa8.12□□□□□ -1.11
PRPF39-202ENST00000424478 FABP2P12104 132 aa8.12□□□□□ -1.11
PRPF39-202ENST00000424478 Q8N1X5 172 aa8.12□□□□□ -1.11
PRPF39-202ENST00000424478 C3orf22Q8N5N4 141 aa8.12□□□□□ -1.11
PRPF39-202ENST00000424478 CBY1Q9Y3M2 126 aa8.11□□□□□ -1.11
PRPF39-202ENST00000424478 SPCS1Q9Y6A9 102 aa8.11□□□□□ -1.11
PRPF39-202ENST00000424478 GAGE2AQ6NT46 116 aa8.11□□□□□ -1.11
PRPF39-202ENST00000424478 H0YGX0 51 aa8.1□□□□□ -1.11
PRPF39-202ENST00000424478 SLC25A20O43772 301 aa8.1□□□□□ -1.11
PRPF39-202ENST00000424478 TRBV7-6A0A0J9YX20 115 aa8.09□□□□□ -1.11
PRPF39-202ENST00000424478 LST1O00453 97 aa8.09□□□□□ -1.11
PRPF39-202ENST00000424478 PLA2G1BP04054 148 aaKnown RBP8.09□□□□□ -1.11
PRPF39-202ENST00000424478 DHRS4-AS1Q9P1J3 65 aa8.08□□□□□ -1.12
PRPF39-202ENST00000424478 PKHD1L1Q86WI1 4243 aa8.07□□□□□ -1.12
PRPF39-202ENST00000424478 H0Y9J4 135 aa8.07□□□□□ -1.12
PRPF39-202ENST00000424478 ATXN8Q156A1 80 aa8.06□□□□□ -1.12
PRPF39-202ENST00000424478 C9JAW5 83 aa8.06□□□□□ -1.12
PRPF39-202ENST00000424478 DNAL4O96015 105 aa8.06□□□□□ -1.12
PRPF39-202ENST00000424478 LINC01547P58512 204 aaPredicted RBP8.06□□□□□ -1.12
PRPF39-202ENST00000424478 A0A0G2JQZ4 141 aa8.04□□□□□ -1.12
PRPF39-202ENST00000424478 Q8N377 158 aa8.04□□□□□ -1.12
PRPF39-202ENST00000424478 SPRR4Q96PI1 79 aa8.04□□□□□ -1.12
PRPF39-202ENST00000424478 K7EP34 96 aa8.04□□□□□ -1.12
PRPF39-202ENST00000424478 A0A087X002 238 aa8.03□□□□□ -1.12
PRPF39-202ENST00000424478 INAFM2P0DMQ5 153 aa8.03□□□□□ -1.12
PRPF39-202ENST00000424478 LYRM7Q5U5X0 104 aa8.03□□□□□ -1.12
PRPF39-202ENST00000424478 KRTAP1-4P0C5Y4 121 aa8.02□□□□□ -1.13
PRPF39-202ENST00000424478 SPINK6Q6UWN8 80 aa8.02□□□□□ -1.13
PRPF39-202ENST00000424478 IGLV9-49A0A0B4J1Y8 123 aa8.02□□□□□ -1.13
PRPF39-202ENST00000424478 PCLOQ9Y6V0 5065 aa8.01□□□□□ -1.13
PRPF39-202ENST00000424478 TRBV20-1A0A075B6N2 111 aa8.01□□□□□ -1.13
PRPF39-202ENST00000424478 TRACP01848 142 aa8.01□□□□□ -1.13
PRPF39-202ENST00000424478 FAT3Q8TDW7 4589 aa8□□□□□ -1.13
PRPF39-202ENST00000424478 BAALC-AS2P0C853 105 aa8□□□□□ -1.13
PRPF39-202ENST00000424478 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8□□□□□ -1.13
PRPF39-202ENST00000424478 ORMDL1Q9P0S3 153 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms