RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 LINC01600Q96MT4 127 aa15.35■□□□□ 0.05
TSPAN3-203ENST00000424443 SPRR1AP35321 89 aa15.34■□□□□ 0.05
TSPAN3-203ENST00000424443 LRP1Q07954 4544 aaKnown RBP15.34■□□□□ 0.05
TSPAN3-203ENST00000424443 HIST1H4GQ99525 98 aa15.33■□□□□ 0.05
TSPAN3-203ENST00000424443 DMBT1Q9UGM3 2413 aaPredicted RBP15.32■□□□□ 0.04
TSPAN3-203ENST00000424443 HIGD2AQ9BW72 106 aa15.32■□□□□ 0.04
TSPAN3-203ENST00000424443 A6NDN8 102 aa15.29■□□□□ 0.04
TSPAN3-203ENST00000424443 HINT1P49773 126 aaPredicted RBP15.29■□□□□ 0.04
TSPAN3-203ENST00000424443 FAT3Q8TDW7 4589 aa15.28■□□□□ 0.04
TSPAN3-203ENST00000424443 KRTAP4-16G5E9R7 235 aaPredicted RBP15.28■□□□□ 0.04
TSPAN3-203ENST00000424443 ZNF73O43830 326 aaPredicted RBP15.28■□□□□ 0.04
TSPAN3-203ENST00000424443 HIGD1BQ9P298 99 aa15.27■□□□□ 0.04
TSPAN3-203ENST00000424443 TRAV13-2A0A0B4J235 113 aa15.26■□□□□ 0.03
TSPAN3-203ENST00000424443 B5MCH6 92 aa15.26■□□□□ 0.03
TSPAN3-203ENST00000424443 A4D1N5 150 aa15.24■□□□□ 0.03
TSPAN3-203ENST00000424443 KRTAP1-4P0C5Y4 121 aa15.24■□□□□ 0.03
TSPAN3-203ENST00000424443 MT1HL1P0DM35 61 aa15.22■□□□□ 0.03
TSPAN3-203ENST00000424443 Q6ZRX8 168 aa15.22■□□□□ 0.03
TSPAN3-203ENST00000424443 C2orf91Q6ZV80 131 aa15.21■□□□□ 0.03
TSPAN3-203ENST00000424443 PRR26Q8N8Z3 221 aa15.21■□□□□ 0.03
TSPAN3-203ENST00000424443 SMCR5Q8TEV8 140 aa15.19■□□□□ 0.02
TSPAN3-203ENST00000424443 KRTAP10-8P60410 259 aa15.18■□□□□ 0.02
TSPAN3-203ENST00000424443 ZNF706Q9Y5V0 76 aaPredicted RBP15.18■□□□□ 0.02
TSPAN3-203ENST00000424443 RPL13AP40429 203 aaKnown RBP15.17■□□□□ 0.02
TSPAN3-203ENST00000424443 C6orf99Q4VX62 202 aa15.17■□□□□ 0.02
TSPAN3-203ENST00000424443 TAL2Q16559 108 aa15.16■□□□□ 0.02
TSPAN3-203ENST00000424443 C12orf57Q99622 126 aa15.16■□□□□ 0.02
TSPAN3-203ENST00000424443 CRYGAP11844 174 aa15.15■□□□□ 0.02
TSPAN3-203ENST00000424443 UQCR10Q9UDW1 63 aa15.15■□□□□ 0.02
TSPAN3-203ENST00000424443 Q9BRP9 147 aa15.14■□□□□ 0.01
TSPAN3-203ENST00000424443 ANAPC11Q9NYG5 84 aa15.14■□□□□ 0.01
TSPAN3-203ENST00000424443 COX7BP24311 80 aa15.13■□□□□ 0.01
TSPAN3-203ENST00000424443 SMIM6P0DI80 62 aa15.12■□□□□ 0.01
TSPAN3-203ENST00000424443 CEND1Q8N111 149 aa15.12■□□□□ 0.01
TSPAN3-203ENST00000424443 SPRR4Q96PI1 79 aa15.12■□□□□ 0.01
TSPAN3-203ENST00000424443 ELOF1P60002 83 aaKnown RBP15.11■□□□□ 0.01
TSPAN3-203ENST00000424443 FAM229BQ4G0N7 80 aa15.11■□□□□ 0.01
TSPAN3-203ENST00000424443 SMIM11BQ8TCY0 68 aa15.11■□□□□ 0.01
TSPAN3-203ENST00000424443 TRBV7-6A0A0J9YX20 115 aa15.1■□□□□ 0.01
TSPAN3-203ENST00000424443 DHRS4-AS1Q9P1J3 65 aa15.1■□□□□ 0.01
TSPAN3-203ENST00000424443 TMEM238LA0A1B0GVL6 79 aa15.09■□□□□ 0.01
TSPAN3-203ENST00000424443 A6NJY4 79 aa15.09■□□□□ 0.01
TSPAN3-203ENST00000424443 RAB37Q96AX2 223 aa15.09■□□□□ 0.01
TSPAN3-203ENST00000424443 A0A087X002 238 aa15.08■□□□□ 0.01
TSPAN3-203ENST00000424443 ERC2-IT1O76042 136 aa15.08■□□□□ 0.01
TSPAN3-203ENST00000424443 A0A1B0GWB2 263 aa15.07■□□□□ 0
TSPAN3-203ENST00000424443 CFC1BP0CG36 223 aa15.06■□□□□ 0
TSPAN3-203ENST00000424443 CFC1P0CG37 223 aa15.06■□□□□ 0
TSPAN3-203ENST00000424443 HSD52Q0P140 79 aa15.06■□□□□ 0
TSPAN3-203ENST00000424443 TYMSOSQ8TAI1 123 aa15.06■□□□□ 0
TSPAN3-203ENST00000424443 VAMP3Q15836 100 aa15.05■□□□□ -0
TSPAN3-203ENST00000424443 GAGE2AQ6NT46 116 aa15.05■□□□□ -0
TSPAN3-203ENST00000424443 LOC105371267A0A1B0GV96 52 aa15.04■□□□□ -0
TSPAN3-203ENST00000424443 TNXBP22105 4242 aa15.03■□□□□ -0
TSPAN3-203ENST00000424443 A0A0B4J2C4 111 aa15.02■□□□□ -0
TSPAN3-203ENST00000424443 PRO1933Q9H354 126 aa15.02■□□□□ -0
TSPAN3-203ENST00000424443 H7C2G1 150 aa15.01□□□□□ -0.01
TSPAN3-203ENST00000424443 FXYD2P54710 66 aa15.01□□□□□ -0.01
TSPAN3-203ENST00000424443 KRTAP13-2Q52LG2 175 aa14.99□□□□□ -0.01
TSPAN3-203ENST00000424443 LINC00483Q53H64 154 aa14.98□□□□□ -0.01
TSPAN3-203ENST00000424443 NHP2Q9NX24 153 aaKnown RBP14.98□□□□□ -0.01
TSPAN3-203ENST00000424443 ST20-AS1Q8NBB2 130 aa14.97□□□□□ -0.01
TSPAN3-203ENST00000424443 SLC25A20O43772 301 aa14.97□□□□□ -0.01
TSPAN3-203ENST00000424443 HERC1Q15751 4861 aa14.96□□□□□ -0.01
TSPAN3-203ENST00000424443 Q1RN00 199 aa14.96□□□□□ -0.02
TSPAN3-203ENST00000424443 BVES-AS1Q5T3Y7 98 aa14.96□□□□□ -0.02
TSPAN3-203ENST00000424443 PRO1854Q9UHT4 67 aa14.96□□□□□ -0.02
TSPAN3-203ENST00000424443 C3orf22Q8N5N4 141 aa14.94□□□□□ -0.02
TSPAN3-203ENST00000424443 DEFB105AQ8NG35 78 aa14.9□□□□□ -0.02
TSPAN3-203ENST00000424443 IGLV9-49A0A0B4J1Y8 123 aa14.89□□□□□ -0.03
TSPAN3-203ENST00000424443 TSTD3H0UI37 97 aa14.89□□□□□ -0.03
TSPAN3-203ENST00000424443 LINC00575Q6W349 94 aa14.88□□□□□ -0.03
TSPAN3-203ENST00000424443 hADV29S1A0JD25 119 aa14.87□□□□□ -0.03
TSPAN3-203ENST00000424443 LINC00304Q8N9R0 145 aa14.87□□□□□ -0.03
TSPAN3-203ENST00000424443 TEX49A0A1B0GTD5 131 aa14.85□□□□□ -0.03
TSPAN3-203ENST00000424443 SPRR1BP22528 89 aa14.85□□□□□ -0.03
TSPAN3-203ENST00000424443 MOBPQ13875 183 aa14.84□□□□□ -0.03
TSPAN3-203ENST00000424443 LAMTOR3Q9UHA4 124 aa14.84□□□□□ -0.03
TSPAN3-203ENST00000424443 K7ERJ3 54 aa14.83□□□□□ -0.04
TSPAN3-203ENST00000424443 SNCGO76070 127 aa14.83□□□□□ -0.04
TSPAN3-203ENST00000424443 CTAG1AP78358 180 aa14.83□□□□□ -0.04
TSPAN3-203ENST00000424443 C9orf153Q5TBE3 101 aa14.83□□□□□ -0.04
TSPAN3-203ENST00000424443 H0YGX0 51 aa14.82□□□□□ -0.04
TSPAN3-203ENST00000424443 TSPAN13O95857 204 aa14.82□□□□□ -0.04
TSPAN3-203ENST00000424443 C4orf48Q5BLP8 95 aa14.82□□□□□ -0.04
TSPAN3-203ENST00000424443 M0R143 59 aa14.81□□□□□ -0.04
TSPAN3-203ENST00000424443 SSBP3-AS1Q7Z2R9 100 aa14.81□□□□□ -0.04
TSPAN3-203ENST00000424443 Q8NBF4 154 aa14.8□□□□□ -0.04
TSPAN3-203ENST00000424443 IGLV5-48A0A075B6I7 105 aa14.78□□□□□ -0.04
TSPAN3-203ENST00000424443 PSMB2P49721 201 aa14.78□□□□□ -0.04
TSPAN3-203ENST00000424443 SPAG11AQ6PDA7 123 aa14.78□□□□□ -0.04
TSPAN3-203ENST00000424443 Q6ZQY7 126 aa14.78□□□□□ -0.04
TSPAN3-203ENST00000424443 LINC01547P58512 204 aaPredicted RBP14.76□□□□□ -0.05
TSPAN3-203ENST00000424443 TRIAP1O43715 76 aa14.75□□□□□ -0.05
TSPAN3-203ENST00000424443 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.75□□□□□ -0.05
TSPAN3-203ENST00000424443 COX6CP09669 75 aa14.74□□□□□ -0.05
TSPAN3-203ENST00000424443 Q8N377 158 aa14.72□□□□□ -0.05
TSPAN3-203ENST00000424443 FAM218AQ96MZ4 157 aa14.69□□□□□ -0.06
TSPAN3-203ENST00000424443 A0A1B0GX51 115 aa14.68□□□□□ -0.06
TSPAN3-203ENST00000424443 SMIM29Q86T20 159 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms