RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 LINC00518Q8N0U6 118 aa13.04□□□□□ -0.32
SEC22C-207ENST00000423701 MT1HL1P0DM35 61 aa13.04□□□□□ -0.32
SEC22C-207ENST00000423701 OR13C6PQ8NH95 151 aa13.04□□□□□ -0.32
SEC22C-207ENST00000423701 DMBT1Q9UGM3 2413 aaPredicted RBP13.03□□□□□ -0.32
SEC22C-207ENST00000423701 ETDCA0A1B0GVM5 59 aa13.03□□□□□ -0.32
SEC22C-207ENST00000423701 KRTAP1-4P0C5Y4 121 aa13.03□□□□□ -0.32
SEC22C-207ENST00000423701 SLC25A34Q6PIV7 304 aa13.02□□□□□ -0.33
SEC22C-207ENST00000423701 HIST1H4GQ99525 98 aa12.99□□□□□ -0.33
SEC22C-207ENST00000423701 HIGD2AQ9BW72 106 aa12.99□□□□□ -0.33
SEC22C-207ENST00000423701 B5MCH6 92 aa12.98□□□□□ -0.33
SEC22C-207ENST00000423701 ZNF73O43830 326 aaPredicted RBP12.98□□□□□ -0.33
SEC22C-207ENST00000423701 C2orf91Q6ZV80 131 aa12.98□□□□□ -0.33
SEC22C-207ENST00000423701 CBY1Q9Y3M2 126 aa12.98□□□□□ -0.33
SEC22C-207ENST00000423701 HIGD1BQ9P298 99 aa12.97□□□□□ -0.33
SEC22C-207ENST00000423701 A4D1N5 150 aa12.96□□□□□ -0.34
SEC22C-207ENST00000423701 A6NDN8 102 aa12.95□□□□□ -0.34
SEC22C-207ENST00000423701 KRTAP10-8P60410 259 aa12.95□□□□□ -0.34
SEC22C-207ENST00000423701 Q6ZRX8 168 aa12.95□□□□□ -0.34
SEC22C-207ENST00000423701 PRR26Q8N8Z3 221 aa12.94□□□□□ -0.34
SEC22C-207ENST00000423701 SMCR5Q8TEV8 140 aa12.93□□□□□ -0.34
SEC22C-207ENST00000423701 TRAV13-2A0A0B4J235 113 aa12.92□□□□□ -0.34
SEC22C-207ENST00000423701 HERC1Q15751 4861 aa12.92□□□□□ -0.34
SEC22C-207ENST00000423701 Q9BRP9 147 aa12.91□□□□□ -0.34
SEC22C-207ENST00000423701 TNXBP22105 4242 aa12.91□□□□□ -0.34
SEC22C-207ENST00000423701 HINT1P49773 126 aaPredicted RBP12.9□□□□□ -0.34
SEC22C-207ENST00000423701 C6orf99Q4VX62 202 aa12.9□□□□□ -0.34
SEC22C-207ENST00000423701 ANAPC11Q9NYG5 84 aa12.9□□□□□ -0.34
SEC22C-207ENST00000423701 C12orf57Q99622 126 aa12.89□□□□□ -0.35
SEC22C-207ENST00000423701 A0A087X002 238 aa12.87□□□□□ -0.35
SEC22C-207ENST00000423701 ERC2-IT1O76042 136 aa12.87□□□□□ -0.35
SEC22C-207ENST00000423701 SPRR4Q96PI1 79 aa12.87□□□□□ -0.35
SEC22C-207ENST00000423701 TAL2Q16559 108 aa12.86□□□□□ -0.35
SEC22C-207ENST00000423701 RPL13AP40429 203 aaKnown RBP12.85□□□□□ -0.35
SEC22C-207ENST00000423701 ZNF706Q9Y5V0 76 aaPredicted RBP12.85□□□□□ -0.35
SEC22C-207ENST00000423701 SMIM6P0DI80 62 aa12.85□□□□□ -0.35
SEC22C-207ENST00000423701 CRYGAP11844 174 aa12.85□□□□□ -0.35
SEC22C-207ENST00000423701 ELOF1P60002 83 aaKnown RBP12.85□□□□□ -0.35
SEC22C-207ENST00000423701 FAM229BQ4G0N7 80 aa12.85□□□□□ -0.35
SEC22C-207ENST00000423701 SMIM11BQ8TCY0 68 aa12.85□□□□□ -0.35
SEC22C-207ENST00000423701 UQCR10Q9UDW1 63 aa12.85□□□□□ -0.35
SEC22C-207ENST00000423701 COX7BP24311 80 aa12.84□□□□□ -0.35
SEC22C-207ENST00000423701 CEND1Q8N111 149 aa12.84□□□□□ -0.35
SEC22C-207ENST00000423701 LOC105371267A0A1B0GV96 52 aa12.83□□□□□ -0.36
SEC22C-207ENST00000423701 TRBV7-6A0A0J9YX20 115 aa12.82□□□□□ -0.36
SEC22C-207ENST00000423701 CFC1BP0CG36 223 aa12.8□□□□□ -0.36
SEC22C-207ENST00000423701 CFC1P0CG37 223 aa12.8□□□□□ -0.36
SEC22C-207ENST00000423701 KRTAP13-2Q52LG2 175 aa12.8□□□□□ -0.36
SEC22C-207ENST00000423701 A0A1B0GWB2 263 aa12.79□□□□□ -0.36
SEC22C-207ENST00000423701 DHRS4-AS1Q9P1J3 65 aa12.79□□□□□ -0.36
SEC22C-207ENST00000423701 HSD52Q0P140 79 aa12.78□□□□□ -0.36
SEC22C-207ENST00000423701 A0A0B4J2C4 111 aa12.78□□□□□ -0.36
SEC22C-207ENST00000423701 FXYD2P54710 66 aa12.78□□□□□ -0.36
SEC22C-207ENST00000423701 LINC00483Q53H64 154 aa12.77□□□□□ -0.37
SEC22C-207ENST00000423701 GAGE2AQ6NT46 116 aa12.77□□□□□ -0.37
SEC22C-207ENST00000423701 TYMSOSQ8TAI1 123 aa12.77□□□□□ -0.37
SEC22C-207ENST00000423701 RAB37Q96AX2 223 aa12.77□□□□□ -0.37
SEC22C-207ENST00000423701 TMEM238LA0A1B0GVL6 79 aa12.76□□□□□ -0.37
SEC22C-207ENST00000423701 A6NJY4 79 aa12.76□□□□□ -0.37
SEC22C-207ENST00000423701 ST20-AS1Q8NBB2 130 aa12.76□□□□□ -0.37
SEC22C-207ENST00000423701 PRO1933Q9H354 126 aa12.76□□□□□ -0.37
SEC22C-207ENST00000423701 C3orf22Q8N5N4 141 aa12.72□□□□□ -0.37
SEC22C-207ENST00000423701 H7C2G1 150 aa12.72□□□□□ -0.37
SEC22C-207ENST00000423701 VAMP3Q15836 100 aa12.71□□□□□ -0.38
SEC22C-207ENST00000423701 PRO1854Q9UHT4 67 aa12.68□□□□□ -0.38
SEC22C-207ENST00000423701 NHP2Q9NX24 153 aaKnown RBP12.67□□□□□ -0.38
SEC22C-207ENST00000423701 BVES-AS1Q5T3Y7 98 aa12.66□□□□□ -0.38
SEC22C-207ENST00000423701 SPRR1BP22528 89 aa12.65□□□□□ -0.38
SEC22C-207ENST00000423701 LINC00575Q6W349 94 aa12.65□□□□□ -0.38
SEC22C-207ENST00000423701 Q1RN00 199 aa12.65□□□□□ -0.38
SEC22C-207ENST00000423701 IGLV9-49A0A0B4J1Y8 123 aa12.64□□□□□ -0.39
SEC22C-207ENST00000423701 K7ERJ3 54 aa12.64□□□□□ -0.39
SEC22C-207ENST00000423701 SLC25A20O43772 301 aa12.64□□□□□ -0.39
SEC22C-207ENST00000423701 LINC00304Q8N9R0 145 aa12.62□□□□□ -0.39
SEC22C-207ENST00000423701 DEFB105AQ8NG35 78 aa12.62□□□□□ -0.39
SEC22C-207ENST00000423701 MOBPQ13875 183 aa12.61□□□□□ -0.39
SEC22C-207ENST00000423701 IGLV5-48A0A075B6I7 105 aa12.6□□□□□ -0.39
SEC22C-207ENST00000423701 hADV29S1A0JD25 119 aa12.59□□□□□ -0.39
SEC22C-207ENST00000423701 TSTD3H0UI37 97 aa12.59□□□□□ -0.39
SEC22C-207ENST00000423701 LINC01547P58512 204 aaPredicted RBP12.59□□□□□ -0.39
SEC22C-207ENST00000423701 CTAG1AP78358 180 aa12.59□□□□□ -0.39
SEC22C-207ENST00000423701 TEX49A0A1B0GTD5 131 aa12.59□□□□□ -0.39
SEC22C-207ENST00000423701 Q8NBF4 154 aa12.59□□□□□ -0.39
SEC22C-207ENST00000423701 HMCN2Q8NDA2 5059 aa12.58□□□□□ -0.4
SEC22C-207ENST00000423701 TSPAN13O95857 204 aa12.58□□□□□ -0.4
SEC22C-207ENST00000423701 C9orf153Q5TBE3 101 aa12.57□□□□□ -0.4
SEC22C-207ENST00000423701 Q6ZQY7 126 aa12.56□□□□□ -0.4
SEC22C-207ENST00000423701 H0YGX0 51 aa12.55□□□□□ -0.4
SEC22C-207ENST00000423701 TRIAP1O43715 76 aa12.55□□□□□ -0.4
SEC22C-207ENST00000423701 LAMTOR3Q9UHA4 124 aa12.55□□□□□ -0.4
SEC22C-207ENST00000423701 SSBP3-AS1Q7Z2R9 100 aa12.54□□□□□ -0.4
SEC22C-207ENST00000423701 M0R143 59 aa12.53□□□□□ -0.4
SEC22C-207ENST00000423701 SMIM29Q86T20 159 aa12.53□□□□□ -0.4
SEC22C-207ENST00000423701 Q8N377 158 aa12.53□□□□□ -0.4
SEC22C-207ENST00000423701 FAM218AQ96MZ4 157 aa12.53□□□□□ -0.4
SEC22C-207ENST00000423701 SPAG11AQ6PDA7 123 aa12.52□□□□□ -0.41
SEC22C-207ENST00000423701 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.51□□□□□ -0.41
SEC22C-207ENST00000423701 PSMB2P49721 201 aa12.5□□□□□ -0.41
SEC22C-207ENST00000423701 C4orf48Q5BLP8 95 aa12.49□□□□□ -0.41
SEC22C-207ENST00000423701 SNCGO76070 127 aa12.46□□□□□ -0.42
SEC22C-207ENST00000423701 CLEC2BQ92478 149 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms