RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 SPANXCQ9NY87 97 aa15.5■□□□□ 0.07
CDK9-202ENST00000421939 SCGB1D4Q6XE38 83 aa15.49■□□□□ 0.07
CDK9-202ENST00000421939 TRAV23DV6A0A075B6W5 121 aa15.48■□□□□ 0.07
CDK9-202ENST00000421939 SMCR5Q8TEV8 140 aa15.48■□□□□ 0.07
CDK9-202ENST00000421939 Q6ZRX8 168 aa15.45■□□□□ 0.06
CDK9-202ENST00000421939 SNRPEP62304 92 aaKnown RBP15.44■□□□□ 0.06
CDK9-202ENST00000421939 SPANXDQ9BXN6 97 aa15.44■□□□□ 0.06
CDK9-202ENST00000421939 TSPAN13O95857 204 aa15.43■□□□□ 0.06
CDK9-202ENST00000421939 PCP2Q8IVA1 136 aa15.43■□□□□ 0.06
CDK9-202ENST00000421939 CBY1Q9Y3M2 126 aa15.43■□□□□ 0.06
CDK9-202ENST00000421939 ZNF73O43830 326 aaPredicted RBP15.42■□□□□ 0.06
CDK9-202ENST00000421939 C3orf22Q8N5N4 141 aa15.41■□□□□ 0.06
CDK9-202ENST00000421939 LINC00304Q8N9R0 145 aa15.41■□□□□ 0.06
CDK9-202ENST00000421939 Q9BRP9 147 aa15.41■□□□□ 0.06
CDK9-202ENST00000421939 OR13C6PQ8NH95 151 aa15.4■□□□□ 0.06
CDK9-202ENST00000421939 ERC2-IT1O76042 136 aa15.39■□□□□ 0.05
CDK9-202ENST00000421939 COPS9Q8WXC6 57 aa15.38■□□□□ 0.05
CDK9-202ENST00000421939 JOSD1Q15040 202 aaPredicted RBP15.37■□□□□ 0.05
CDK9-202ENST00000421939 LINC00518Q8N0U6 118 aa15.37■□□□□ 0.05
CDK9-202ENST00000421939 PPDPFQ9H3Y8 114 aa15.37■□□□□ 0.05
CDK9-202ENST00000421939 HSBP1L1C9JCN9 74 aa15.36■□□□□ 0.05
CDK9-202ENST00000421939 IFITM1P13164 125 aa15.36■□□□□ 0.05
CDK9-202ENST00000421939 PRR4Q16378 134 aa15.36■□□□□ 0.05
CDK9-202ENST00000421939 LINC00483Q53H64 154 aa15.36■□□□□ 0.05
CDK9-202ENST00000421939 Q6ZVH6 145 aa15.36■□□□□ 0.05
CDK9-202ENST00000421939 LPAP08519 4548 aa15.36■□□□□ 0.05
CDK9-202ENST00000421939 HINT1P49773 126 aaPredicted RBP15.33■□□□□ 0.04
CDK9-202ENST00000421939 GAGE2AQ6NT46 116 aa15.33■□□□□ 0.04
CDK9-202ENST00000421939 C5orf52A6NGY3 159 aa15.32■□□□□ 0.04
CDK9-202ENST00000421939 MUSTN1Q8IVN3 82 aa15.29■□□□□ 0.04
CDK9-202ENST00000421939 SCGB1D1O95968 90 aa15.27■□□□□ 0.04
CDK9-202ENST00000421939 CTAG1AP78358 180 aa15.27■□□□□ 0.04
CDK9-202ENST00000421939 C6orf99Q4VX62 202 aa15.25■□□□□ 0.03
CDK9-202ENST00000421939 SPAG11AQ6PDA7 123 aa15.24■□□□□ 0.03
CDK9-202ENST00000421939 Q8NBF4 154 aa15.24■□□□□ 0.03
CDK9-202ENST00000421939 RNF213Q63HN8 5207 aa15.22■□□□□ 0.03
CDK9-202ENST00000421939 ELOF1P60002 83 aaKnown RBP15.22■□□□□ 0.03
CDK9-202ENST00000421939 ST20-AS1Q8NBB2 130 aa15.22■□□□□ 0.03
CDK9-202ENST00000421939 DHRS4-AS1Q9P1J3 65 aa15.22■□□□□ 0.03
CDK9-202ENST00000421939 IGLV9-49A0A0B4J1Y8 123 aa15.21■□□□□ 0.03
CDK9-202ENST00000421939 A6NDN8 102 aa15.21■□□□□ 0.03
CDK9-202ENST00000421939 COX7BP24311 80 aa15.21■□□□□ 0.03
CDK9-202ENST00000421939 MOBPQ13875 183 aa15.21■□□□□ 0.03
CDK9-202ENST00000421939 RETNLBQ9BQ08 111 aa15.21■□□□□ 0.03
CDK9-202ENST00000421939 C4orf48Q5BLP8 95 aa15.2■□□□□ 0.02
CDK9-202ENST00000421939 TRAV13-2A0A0B4J235 113 aa15.16■□□□□ 0.02
CDK9-202ENST00000421939 TRBV7-6A0A0J9YX20 115 aa15.16■□□□□ 0.02
CDK9-202ENST00000421939 SSBP3-AS1Q7Z2R9 100 aa15.14■□□□□ 0.01
CDK9-202ENST00000421939 A0A1B0GWB2 263 aa15.12■□□□□ 0.01
CDK9-202ENST00000421939 COX8AP10176 69 aa15.12■□□□□ 0.01
CDK9-202ENST00000421939 SPINK1P00995 79 aa15.11■□□□□ 0.01
CDK9-202ENST00000421939 SPRR1BP22528 89 aa15.11■□□□□ 0.01
CDK9-202ENST00000421939 C9orf153Q5TBE3 101 aa15.11■□□□□ 0.01
CDK9-202ENST00000421939 A4D1N5 150 aa15.09■□□□□ 0.01
CDK9-202ENST00000421939 SMIM11BQ8TCY0 68 aa15.08■□□□□ 0
CDK9-202ENST00000421939 SLC25A34Q6PIV7 304 aa15.07■□□□□ 0
CDK9-202ENST00000421939 DLEU1O43261 78 aa15.06■□□□□ 0
CDK9-202ENST00000421939 PAM16Q9Y3D7 125 aa15.06■□□□□ 0
CDK9-202ENST00000421939 IGLV7-46A0A075B6I9 117 aa15.05■□□□□ -0
CDK9-202ENST00000421939 HIST1H4GQ99525 98 aa15.05■□□□□ -0
CDK9-202ENST00000421939 SPATA45Q537H7 98 aa15.04■□□□□ -0
CDK9-202ENST00000421939 VAMP8Q9BV40 100 aa15.03■□□□□ -0
CDK9-202ENST00000421939 RPS29P62273 56 aaKnown RBP15.02■□□□□ -0
CDK9-202ENST00000421939 C14orf144Q96I85 54 aa15.02■□□□□ -0
CDK9-202ENST00000421939 LAMTOR3Q9UHA4 124 aa15.02■□□□□ -0
CDK9-202ENST00000421939 TAL2Q16559 108 aa15.01□□□□□ -0.01
CDK9-202ENST00000421939 TPRXLQ17RH7 258 aa15□□□□□ -0.01
CDK9-202ENST00000421939 FP248Q71RG6 208 aaPredicted RBP15□□□□□ -0.01
CDK9-202ENST00000421939 DEFB105AQ8NG35 78 aa15□□□□□ -0.01
CDK9-202ENST00000421939 TEX49A0A1B0GTD5 131 aa14.99□□□□□ -0.01
CDK9-202ENST00000421939 NHP2Q9NX24 153 aaKnown RBP14.99□□□□□ -0.01
CDK9-202ENST00000421939 C12orf57Q99622 126 aa14.98□□□□□ -0.01
CDK9-202ENST00000421939 IGLV5-48A0A075B6I7 105 aa14.96□□□□□ -0.01
CDK9-202ENST00000421939 VAMP3Q15836 100 aa14.96□□□□□ -0.01
CDK9-202ENST00000421939 Q1RN00 199 aa14.96□□□□□ -0.01
CDK9-202ENST00000421939 Q8N377 158 aa14.95□□□□□ -0.02
CDK9-202ENST00000421939 HIGD1BQ9P298 99 aa14.95□□□□□ -0.02
CDK9-202ENST00000421939 LINC01547P58512 204 aaPredicted RBP14.94□□□□□ -0.02
CDK9-202ENST00000421939 SLC25A20O43772 301 aa14.92□□□□□ -0.02
CDK9-202ENST00000421939 CDIP1Q9H305 208 aa14.92□□□□□ -0.02
CDK9-202ENST00000421939 C2orf91Q6ZV80 131 aa14.91□□□□□ -0.02
CDK9-202ENST00000421939 SMIM29Q86T20 159 aa14.9□□□□□ -0.02
CDK9-202ENST00000421939 TMA7Q9Y2S6 64 aaKnown RBP14.9□□□□□ -0.02
CDK9-202ENST00000421939 LINC00575Q6W349 94 aa14.89□□□□□ -0.03
CDK9-202ENST00000421939 PYY3Q5JQD4 70 aa14.87□□□□□ -0.03
CDK9-202ENST00000421939 PRO1933Q9H354 126 aa14.85□□□□□ -0.03
CDK9-202ENST00000421939 CFC1BP0CG36 223 aa14.84□□□□□ -0.03
CDK9-202ENST00000421939 CFC1P0CG37 223 aa14.84□□□□□ -0.03
CDK9-202ENST00000421939 HRCT1Q6UXD1 115 aa14.84□□□□□ -0.03
CDK9-202ENST00000421939 hADV29S1A0JD25 119 aa14.83□□□□□ -0.04
CDK9-202ENST00000421939 BVES-AS1Q5T3Y7 98 aa14.83□□□□□ -0.04
CDK9-202ENST00000421939 RAB37Q96AX2 223 aa14.83□□□□□ -0.04
CDK9-202ENST00000421939 LIMD2Q9BT23 127 aa14.83□□□□□ -0.04
CDK9-202ENST00000421939 H7C2G1 150 aa14.82□□□□□ -0.04
CDK9-202ENST00000421939 KRTAP13-3Q3SY46 172 aa14.82□□□□□ -0.04
CDK9-202ENST00000421939 A0A0B4J2C4 111 aa14.81□□□□□ -0.04
CDK9-202ENST00000421939 Q6ZQY7 126 aa14.81□□□□□ -0.04
CDK9-202ENST00000421939 MUC2Q02817 5179 aa14.8□□□□□ -0.04
CDK9-202ENST00000421939 CD164Q04900 197 aa14.8□□□□□ -0.04
CDK9-202ENST00000421939 CEND1Q8N111 149 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms