RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 C20orf202A1L168 122 aa3.44□□□□□ -1.86
PMS1-208ENST00000421722 C9JQL5 133 aa3.44□□□□□ -1.86
PMS1-208ENST00000421722 MT2AP02795 61 aa3.44□□□□□ -1.86
PMS1-208ENST00000421722 KRTAP19-6Q3LI70 58 aa3.44□□□□□ -1.86
PMS1-208ENST00000421722 ARL17AQ8IVW1 177 aa3.44□□□□□ -1.86
PMS1-208ENST00000421722 DDTP30046 118 aa3.43□□□□□ -1.86
PMS1-208ENST00000421722 HERV-K104P63124 156 aa3.43□□□□□ -1.86
PMS1-208ENST00000421722 LAMTOR3Q9UHA4 124 aa3.43□□□□□ -1.86
PMS1-208ENST00000421722 hCG_2014768A0A024R1R8 64 aa3.42□□□□□ -1.86
PMS1-208ENST00000421722 C1orf195Q5TG92 126 aa3.42□□□□□ -1.86
PMS1-208ENST00000421722 MAP1LC3CQ9BXW4 147 aa3.42□□□□□ -1.86
PMS1-208ENST00000421722 KRTAP9-3Q9BYQ3 159 aa3.42□□□□□ -1.86
PMS1-208ENST00000421722 CBY1Q9Y3M2 126 aa3.42□□□□□ -1.86
PMS1-208ENST00000421722 SMIM13P0DJ93 91 aa3.42□□□□□ -1.86
PMS1-208ENST00000421722 C10orf91Q5T1B1 145 aa3.42□□□□□ -1.86
PMS1-208ENST00000421722 H7C2G1 150 aa3.41□□□□□ -1.86
PMS1-208ENST00000421722 MT-ND4LP03901 98 aa3.41□□□□□ -1.86
PMS1-208ENST00000421722 HRCT1Q6UXD1 115 aa3.41□□□□□ -1.86
PMS1-208ENST00000421722 MIR7-3HGQ8N6C7 128 aa3.41□□□□□ -1.86
PMS1-208ENST00000421722 PRO1933Q9H354 126 aa3.41□□□□□ -1.86
PMS1-208ENST00000421722 MEIG1Q5JSS6 88 aa3.41□□□□□ -1.86
PMS1-208ENST00000421722 SPANXB1Q9NS25 103 aaPredicted RBP3.41□□□□□ -1.86
PMS1-208ENST00000421722 C11orf86A6NJI1 115 aa3.4□□□□□ -1.86
PMS1-208ENST00000421722 ATP11AUNQ6ZP68 121 aa3.4□□□□□ -1.86
PMS1-208ENST00000421722 Q75L30 129 aa3.4□□□□□ -1.86
PMS1-208ENST00000421722 ST20-AS1Q8NBB2 130 aa3.4□□□□□ -1.86
PMS1-208ENST00000421722 A0A0U1RRA0 63 aa3.4□□□□□ -1.87
PMS1-208ENST00000421722 NDUFC2O95298 119 aa3.4□□□□□ -1.87
PMS1-208ENST00000421722 NDUFA6P56556 154 aa3.4□□□□□ -1.87
PMS1-208ENST00000421722 TMEM170BQ5T4T1 132 aa3.4□□□□□ -1.87
PMS1-208ENST00000421722 SMIM29Q86T20 159 aa3.4□□□□□ -1.87
PMS1-208ENST00000421722 SMCO4Q9NRQ5 59 aa3.4□□□□□ -1.87
PMS1-208ENST00000421722 TMEM223A0PJW6 202 aa3.39□□□□□ -1.87
PMS1-208ENST00000421722 TRAV23DV6A0A075B6W5 121 aa3.39□□□□□ -1.87
PMS1-208ENST00000421722 MT1FP04733 61 aa3.39□□□□□ -1.87
PMS1-208ENST00000421722 HINT1P49773 126 aaPredicted RBP3.39□□□□□ -1.87
PMS1-208ENST00000421722 DHRS4-AS1Q9P1J3 65 aa3.39□□□□□ -1.87
PMS1-208ENST00000421722 S100A7L2Q5SY68 101 aa3.38□□□□□ -1.87
PMS1-208ENST00000421722 TRBV20-1A0A075B6N2 111 aa3.37□□□□□ -1.87
PMS1-208ENST00000421722 MYMXA0A1B0GTQ4 84 aa3.37□□□□□ -1.87
PMS1-208ENST00000421722 ZNF73O43830 326 aaPredicted RBP3.37□□□□□ -1.87
PMS1-208ENST00000421722 TCL1BO95988 128 aa3.37□□□□□ -1.87
PMS1-208ENST00000421722 HBDP02042 147 aa3.37□□□□□ -1.87
PMS1-208ENST00000421722 COX19Q49B96 90 aa3.37□□□□□ -1.87
PMS1-208ENST00000421722 KRTAP10-10P60014 251 aa3.37□□□□□ -1.87
PMS1-208ENST00000421722 BAGE3Q86Y29 109 aa3.37□□□□□ -1.87
PMS1-208ENST00000421722 CHTOPQ9Y3Y2 248 aaKnown RBP3.37□□□□□ -1.87
PMS1-208ENST00000421722 AKR1D1P51857 326 aa3.36□□□□□ -1.87
PMS1-208ENST00000421722 IFITM2Q01629 132 aa3.36□□□□□ -1.87
PMS1-208ENST00000421722 Q1RN00 199 aa3.36□□□□□ -1.87
PMS1-208ENST00000421722 C6orf99Q4VX62 202 aa3.36□□□□□ -1.87
PMS1-208ENST00000421722 COMMD7Q86VX2 200 aa3.36□□□□□ -1.87
PMS1-208ENST00000421722 A0A096LNJ9 63 aa3.36□□□□□ -1.87
PMS1-208ENST00000421722 MACF1Q9UPN3 7388 aaKnown RBP3.35□□□□□ -1.87
PMS1-208ENST00000421722 TRAV12-1A0A0B4J245 112 aa3.35□□□□□ -1.87
PMS1-208ENST00000421722 KRTAP20-1Q3LI63 56 aa3.35□□□□□ -1.87
PMS1-208ENST00000421722 NEBP20929 6669 aa3.35□□□□□ -1.87
PMS1-208ENST00000421722 TEX49A0A1B0GTD5 131 aa3.35□□□□□ -1.87
PMS1-208ENST00000421722 TAL2Q16559 108 aa3.34□□□□□ -1.87
PMS1-208ENST00000421722 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
PMS1-208ENST00000421722 SYNE2Q8WXH0 6885 aaKnown RBP3.34□□□□□ -1.88
PMS1-208ENST00000421722 MIEN1Q9BRT3 115 aa3.33□□□□□ -1.88
PMS1-208ENST00000421722 SEC11CQ9BY50 192 aa3.33□□□□□ -1.88
PMS1-208ENST00000421722 LINC00614P0C842 121 aa3.32□□□□□ -1.88
PMS1-208ENST00000421722 KRTAP5-9P26371 169 aa3.32□□□□□ -1.88
PMS1-208ENST00000421722 LEPROTO15243 131 aa3.32□□□□□ -1.88
PMS1-208ENST00000421722 NMUP48645 174 aa3.32□□□□□ -1.88
PMS1-208ENST00000421722 COX7BP24311 80 aa3.31□□□□□ -1.88
PMS1-208ENST00000421722 RHEBQ15382 184 aa3.31□□□□□ -1.88
PMS1-208ENST00000421722 PCP2Q8IVA1 136 aa3.31□□□□□ -1.88
PMS1-208ENST00000421722 URB1-AS1Q96HZ7 61 aa3.31□□□□□ -1.88
PMS1-208ENST00000421722 TRBV7-6A0A0J9YX20 115 aa3.31□□□□□ -1.88
PMS1-208ENST00000421722 S100PP25815 95 aa3.31□□□□□ -1.88
PMS1-208ENST00000421722 ELOF1P60002 83 aaKnown RBP3.31□□□□□ -1.88
PMS1-208ENST00000421722 FABP9Q0Z7S8 132 aa3.31□□□□□ -1.88
PMS1-208ENST00000421722 IGLV5-48A0A075B6I7 105 aa3.3□□□□□ -1.88
PMS1-208ENST00000421722 C20orf166-AS1Q96NR2 134 aa3.3□□□□□ -1.88
PMS1-208ENST00000421722 FAM236DA0A1B0GTK5 79 aa3.3□□□□□ -1.88
PMS1-208ENST00000421722 A8MUU9 505 aa3.3□□□□□ -1.88
PMS1-208ENST00000421722 FAM236CP0DP71 79 aa3.3□□□□□ -1.88
PMS1-208ENST00000421722 SOSTDC1Q6X4U4 206 aa3.3□□□□□ -1.88
PMS1-208ENST00000421722 OBSCN-AS1Q96MR7 158 aa3.3□□□□□ -1.88
PMS1-208ENST00000421722 DEFB105AQ8NG35 78 aa3.29□□□□□ -1.88
PMS1-208ENST00000421722 C18orf32Q8TCD1 76 aa3.29□□□□□ -1.88
PMS1-208ENST00000421722 SPANXDQ9BXN6 97 aa3.29□□□□□ -1.88
PMS1-208ENST00000421722 IFI27L1Q96BM0 104 aa3.28□□□□□ -1.88
PMS1-208ENST00000421722 LGALS3P17931 250 aaKnown RBP3.28□□□□□ -1.88
PMS1-208ENST00000421722 TSPEAR-AS2P59090 65 aa3.28□□□□□ -1.88
PMS1-208ENST00000421722 RPS10P5Q9NQ39 176 aa3.28□□□□□ -1.88
PMS1-208ENST00000421722 RBM12B-AS1Q9P1G2 102 aa3.28□□□□□ -1.88
PMS1-208ENST00000421722 A0A0G2JQZ4 141 aa3.27□□□□□ -1.89
PMS1-208ENST00000421722 J3QQQ9 107 aa3.27□□□□□ -1.89
PMS1-208ENST00000421722 PMCHL1Q16048 86 aa3.27□□□□□ -1.89
PMS1-208ENST00000421722 MPLKIPQ8TAP9 179 aa3.27□□□□□ -1.89
PMS1-208ENST00000421722 HERVK_113P61574 105 aa3.27□□□□□ -1.89
PMS1-208ENST00000421722 OR13C6PQ8NH95 151 aa3.27□□□□□ -1.89
PMS1-208ENST00000421722 Q96NJ1 140 aa3.27□□□□□ -1.89
PMS1-208ENST00000421722 SPANXCQ9NY87 97 aa3.27□□□□□ -1.89
PMS1-208ENST00000421722 TRBV7-7A0A0K0K1E9 115 aa3.26□□□□□ -1.89
PMS1-208ENST00000421722 ZNF815PA8K554 130 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms