RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 LEPROTO15243 131 aa9.21□□□□□ -0.94
UPF3AP3-201ENST00000420996 SERF1AO75920 110 aa9.21□□□□□ -0.94
UPF3AP3-201ENST00000420996 CFC1BP0CG36 223 aa9.21□□□□□ -0.94
UPF3AP3-201ENST00000420996 NDUFC2O95298 119 aa9.2□□□□□ -0.94
UPF3AP3-201ENST00000420996 PCOTHQ58A44 107 aa9.2□□□□□ -0.94
UPF3AP3-201ENST00000420996 MIEN1Q9BRT3 115 aa9.2□□□□□ -0.94
UPF3AP3-201ENST00000420996 TRAV23DV6A0A075B6W5 121 aa9.19□□□□□ -0.94
UPF3AP3-201ENST00000420996 C5orf52A6NGY3 159 aa9.19□□□□□ -0.94
UPF3AP3-201ENST00000420996 HSBP1O75506 76 aa9.19□□□□□ -0.94
UPF3AP3-201ENST00000420996 IGLV8-61A0A075B6I0 122 aa9.18□□□□□ -0.94
UPF3AP3-201ENST00000420996 ST20-AS1Q8NBB2 130 aa9.18□□□□□ -0.94
UPF3AP3-201ENST00000420996 H0Y8G0 127 aa9.17□□□□□ -0.94
UPF3AP3-201ENST00000420996 J3QQQ9 107 aa9.17□□□□□ -0.94
UPF3AP3-201ENST00000420996 ZNF73O43830 326 aaPredicted RBP9.17□□□□□ -0.94
UPF3AP3-201ENST00000420996 LIMD2Q9BT23 127 aa9.17□□□□□ -0.94
UPF3AP3-201ENST00000420996 NMUP48645 174 aa9.16□□□□□ -0.94
UPF3AP3-201ENST00000420996 PLNP26678 52 aa9.14□□□□□ -0.95
UPF3AP3-201ENST00000420996 C9orf92A6NGG3 77 aa9.13□□□□□ -0.95
UPF3AP3-201ENST00000420996 LGALS3P17931 250 aaKnown RBP9.13□□□□□ -0.95
UPF3AP3-201ENST00000420996 SPRR1BP22528 89 aa9.13□□□□□ -0.95
UPF3AP3-201ENST00000420996 HINT1P49773 126 aaPredicted RBP9.13□□□□□ -0.95
UPF3AP3-201ENST00000420996 CBY1Q9Y3M2 126 aa9.13□□□□□ -0.95
UPF3AP3-201ENST00000420996 LEPROTL1O95214 131 aa9.12□□□□□ -0.95
UPF3AP3-201ENST00000420996 FABP4P15090 132 aa9.12□□□□□ -0.95
UPF3AP3-201ENST00000420996 LORP23490 312 aaPredicted RBP9.12□□□□□ -0.95
UPF3AP3-201ENST00000420996 HERVK_113P61574 105 aa9.12□□□□□ -0.95
UPF3AP3-201ENST00000420996 SLC25A34Q6PIV7 304 aa9.12□□□□□ -0.95
UPF3AP3-201ENST00000420996 HRCT1Q6UXD1 115 aa9.12□□□□□ -0.95
UPF3AP3-201ENST00000420996 SOSTDC1Q6X4U4 206 aa9.12□□□□□ -0.95
UPF3AP3-201ENST00000420996 EIF4EBP3O60516 100 aaPredicted RBP9.11□□□□□ -0.95
UPF3AP3-201ENST00000420996 HIST1H2BKO60814 126 aa9.11□□□□□ -0.95
UPF3AP3-201ENST00000420996 HIST1H2BJP06899 126 aa9.11□□□□□ -0.95
UPF3AP3-201ENST00000420996 HIST1H2BOP23527 126 aa9.11□□□□□ -0.95
UPF3AP3-201ENST00000420996 HIST1H2BBP33778 126 aa9.11□□□□□ -0.95
UPF3AP3-201ENST00000420996 HIST1H2BDP58876 126 aa9.11□□□□□ -0.95
UPF3AP3-201ENST00000420996 HIST1H2BCP62807 126 aa9.11□□□□□ -0.95
UPF3AP3-201ENST00000420996 HIST2H2BEQ16778 126 aa9.11□□□□□ -0.95
UPF3AP3-201ENST00000420996 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.11□□□□□ -0.95
UPF3AP3-201ENST00000420996 HIST1H2BHQ93079 126 aa9.11□□□□□ -0.95
UPF3AP3-201ENST00000420996 HIST1H2BNQ99877 126 aa9.11□□□□□ -0.95
UPF3AP3-201ENST00000420996 HIST1H2BMQ99879 126 aa9.11□□□□□ -0.95
UPF3AP3-201ENST00000420996 DPM2O94777 84 aa9.1□□□□□ -0.95
UPF3AP3-201ENST00000420996 KRTAP10-6P60371 365 aaPredicted RBP9.1□□□□□ -0.95
UPF3AP3-201ENST00000420996 PMCHL2Q9BQD1 86 aa9.1□□□□□ -0.95
UPF3AP3-201ENST00000420996 S100A6P06703 90 aa9.09□□□□□ -0.95
UPF3AP3-201ENST00000420996 NPC2P61916 151 aa9.09□□□□□ -0.95
UPF3AP3-201ENST00000420996 ADAMTSL4-AS1Q5T5F5 129 aa9.09□□□□□ -0.95
UPF3AP3-201ENST00000420996 LAMTOR3Q9UHA4 124 aa9.09□□□□□ -0.95
UPF3AP3-201ENST00000420996 DHRS4-AS1Q9P1J3 65 aa9.08□□□□□ -0.96
UPF3AP3-201ENST00000420996 A0A0J9YXY3 114 aa9.07□□□□□ -0.96
UPF3AP3-201ENST00000420996 IGKCP01834 107 aa9.07□□□□□ -0.96
UPF3AP3-201ENST00000420996 LOC105371267A0A1B0GV96 52 aa9.06□□□□□ -0.96
UPF3AP3-201ENST00000420996 CD164Q04900 197 aa9.06□□□□□ -0.96
UPF3AP3-201ENST00000420996 HSPB8Q9UJY1 196 aa9.05□□□□□ -0.96
UPF3AP3-201ENST00000420996 OR13C6PQ8NH95 151 aa9.04□□□□□ -0.96
UPF3AP3-201ENST00000420996 M0R2T5 61 aa9.03□□□□□ -0.96
UPF3AP3-201ENST00000420996 SMCPP49901 116 aaPredicted RBP9.03□□□□□ -0.96
UPF3AP3-201ENST00000420996 SPANXCQ9NY87 97 aa9.03□□□□□ -0.96
UPF3AP3-201ENST00000420996 PRO1933Q9H354 126 aa9.02□□□□□ -0.97
UPF3AP3-201ENST00000420996 E9PLD3 99 aa9.01□□□□□ -0.97
UPF3AP3-201ENST00000420996 Q5XG85 94 aa9.01□□□□□ -0.97
UPF3AP3-201ENST00000420996 LINC00308Q8TCZ7 52 aa9.01□□□□□ -0.97
UPF3AP3-201ENST00000420996 H7C2G1 150 aa9□□□□□ -0.97
UPF3AP3-201ENST00000420996 ELOF1P60002 83 aaKnown RBP9□□□□□ -0.97
UPF3AP3-201ENST00000420996 TAL2Q16559 108 aa9□□□□□ -0.97
UPF3AP3-201ENST00000420996 Q1RN00 199 aa9□□□□□ -0.97
UPF3AP3-201ENST00000420996 LITAFQ99732 161 aa9□□□□□ -0.97
UPF3AP3-201ENST00000420996 SYS1-DBNDD2H3BUS1 97 aa8.99□□□□□ -0.97
UPF3AP3-201ENST00000420996 COX7BP24311 80 aa8.99□□□□□ -0.97
UPF3AP3-201ENST00000420996 C1orf195Q5TG92 126 aa8.99□□□□□ -0.97
UPF3AP3-201ENST00000420996 SPANXDQ9BXN6 97 aa8.99□□□□□ -0.97
UPF3AP3-201ENST00000420996 RPL37P61927 97 aaKnown RBP8.98□□□□□ -0.97
UPF3AP3-201ENST00000420996 COX6B2Q6YFQ2 88 aa8.98□□□□□ -0.97
UPF3AP3-201ENST00000420996 DEFB105AQ8NG35 78 aa8.98□□□□□ -0.97
UPF3AP3-201ENST00000420996 TEX49A0A1B0GTD5 131 aa8.97□□□□□ -0.97
UPF3AP3-201ENST00000420996 TIMM17BO60830 172 aa8.97□□□□□ -0.97
UPF3AP3-201ENST00000420996 AKR1D1P51857 326 aa8.97□□□□□ -0.97
UPF3AP3-201ENST00000420996 C6orf99Q4VX62 202 aa8.97□□□□□ -0.97
UPF3AP3-201ENST00000420996 COA6Q5JTJ3 125 aaKnown RBP8.96□□□□□ -0.98
UPF3AP3-201ENST00000420996 LINC01545Q5VT33 79 aa8.95□□□□□ -0.98
UPF3AP3-201ENST00000420996 LINC00518Q8N0U6 118 aa8.95□□□□□ -0.98
UPF3AP3-201ENST00000420996 C3orf79P0CE67 100 aa8.94□□□□□ -0.98
UPF3AP3-201ENST00000420996 SMIM29Q86T20 159 aa8.94□□□□□ -0.98
UPF3AP3-201ENST00000420996 TRBV7-6A0A0J9YX20 115 aa8.92□□□□□ -0.98
UPF3AP3-201ENST00000420996 S100A2P29034 98 aa8.92□□□□□ -0.98
UPF3AP3-201ENST00000420996 SNRPEP62304 92 aaKnown RBP8.92□□□□□ -0.98
UPF3AP3-201ENST00000420996 FLGP20930 4061 aaPredicted RBP8.92□□□□□ -0.98
UPF3AP3-201ENST00000420996 PET117Q6UWS5 81 aa8.91□□□□□ -0.98
UPF3AP3-201ENST00000420996 TTTY13Q9BZ97 58 aa8.91□□□□□ -0.98
UPF3AP3-201ENST00000420996 IGLV5-48A0A075B6I7 105 aa8.9□□□□□ -0.98
UPF3AP3-201ENST00000420996 A0A0G2JQZ4 141 aa8.9□□□□□ -0.98
UPF3AP3-201ENST00000420996 KRTDAPP60985 99 aa8.89□□□□□ -0.99
UPF3AP3-201ENST00000420996 A0A1B0GWB2 263 aa8.88□□□□□ -0.99
UPF3AP3-201ENST00000420996 ZNF815PA8K554 130 aa8.88□□□□□ -0.99
UPF3AP3-201ENST00000420996 SMIM6P0DI80 62 aa8.87□□□□□ -0.99
UPF3AP3-201ENST00000420996 TCL1BO95988 128 aa8.86□□□□□ -0.99
UPF3AP3-201ENST00000420996 ANKRD39Q53RE8 183 aa8.84□□□□□ -0.99
UPF3AP3-201ENST00000420996 ATOH7Q8N100 152 aa8.84□□□□□ -0.99
UPF3AP3-201ENST00000420996 C12orf57Q99622 126 aa8.83□□□□□ -1
UPF3AP3-201ENST00000420996 HIST3H2BBQ8N257 126 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms