RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 PSORS1C2Q9UIG4 136 aa11.1□□□□□ -0.63
SYNGAP1-202ENST00000418600 SSBP3-AS1Q7Z2R9 100 aa11.09□□□□□ -0.63
SYNGAP1-202ENST00000418600 VPREB1P12018 145 aa11.07□□□□□ -0.64
SYNGAP1-202ENST00000418600 Q6ZQT0 140 aa11.05□□□□□ -0.64
SYNGAP1-202ENST00000418600 TRBV7-4A0A0J9YYF1 115 aa11.05□□□□□ -0.64
SYNGAP1-202ENST00000418600 Q5VSD8 79 aa11.05□□□□□ -0.64
SYNGAP1-202ENST00000418600 RBM12B-AS1Q9P1G2 102 aa11.04□□□□□ -0.64
SYNGAP1-202ENST00000418600 TLX1NBP0CAT3 122 aa11.03□□□□□ -0.64
SYNGAP1-202ENST00000418600 UTRNP46939 3433 aa11.03□□□□□ -0.64
SYNGAP1-202ENST00000418600 CR1P17927 2039 aa11.01□□□□□ -0.65
SYNGAP1-202ENST00000418600 HELZ2Q9BYK8 2649 aaKnown RBP11.01□□□□□ -0.65
SYNGAP1-202ENST00000418600 A8MWP4 228 aa11□□□□□ -0.65
SYNGAP1-202ENST00000418600 A0A1W2PNN7 141 aa11□□□□□ -0.65
SYNGAP1-202ENST00000418600 C9orf129Q5T035 196 aaKnown RBP10.99□□□□□ -0.65
SYNGAP1-202ENST00000418600 MRPL34Q9BQ48 92 aaKnown RBP10.99□□□□□ -0.65
SYNGAP1-202ENST00000418600 M0R2T5 61 aa10.98□□□□□ -0.65
SYNGAP1-202ENST00000418600 OBSCN-AS1Q96MR7 158 aa10.98□□□□□ -0.65
SYNGAP1-202ENST00000418600 ANAPC11Q9NYG5 84 aa10.98□□□□□ -0.65
SYNGAP1-202ENST00000418600 KCNQ1DNQ9H478 68 aa10.97□□□□□ -0.65
SYNGAP1-202ENST00000418600 PLA2G2DQ9UNK4 145 aa10.97□□□□□ -0.65
SYNGAP1-202ENST00000418600 IGLV7-46A0A075B6I9 117 aa10.97□□□□□ -0.65
SYNGAP1-202ENST00000418600 PRO0628Q9UI54 55 aa10.97□□□□□ -0.65
SYNGAP1-202ENST00000418600 IGLV6-57P01721 117 aa10.94□□□□□ -0.66
SYNGAP1-202ENST00000418600 FAM218AQ96MZ4 157 aa10.94□□□□□ -0.66
SYNGAP1-202ENST00000418600 DSCR10P59022 87 aa10.93□□□□□ -0.66
SYNGAP1-202ENST00000418600 Q6ZSA8 131 aa10.92□□□□□ -0.66
SYNGAP1-202ENST00000418600 SPINT4Q6UDR6 99 aa10.91□□□□□ -0.66
SYNGAP1-202ENST00000418600 IGLV5-37A0A075B6J1 123 aa10.91□□□□□ -0.66
SYNGAP1-202ENST00000418600 PRR26Q8N8Z3 221 aa10.9□□□□□ -0.67
SYNGAP1-202ENST00000418600 RPS28P62857 69 aaKnown RBP10.89□□□□□ -0.67
SYNGAP1-202ENST00000418600 SETD2Q9BYW2 2564 aaPredicted RBP10.89□□□□□ -0.67
SYNGAP1-202ENST00000418600 SPRR4Q96PI1 79 aa10.89□□□□□ -0.67
SYNGAP1-202ENST00000418600 ERC2-IT1O76042 136 aa10.87□□□□□ -0.67
SYNGAP1-202ENST00000418600 LINC01600Q96MT4 127 aa10.87□□□□□ -0.67
SYNGAP1-202ENST00000418600 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.86□□□□□ -0.67
SYNGAP1-202ENST00000418600 IGLV8-61A0A075B6I0 122 aa10.85□□□□□ -0.67
SYNGAP1-202ENST00000418600 CRIPTQ9P021 101 aa10.85□□□□□ -0.67
SYNGAP1-202ENST00000418600 UQCR11O14957 56 aa10.84□□□□□ -0.67
SYNGAP1-202ENST00000418600 CEP350Q5VT06 3117 aa10.83□□□□□ -0.68
SYNGAP1-202ENST00000418600 CYP4F30PQ9H0H9 118 aa10.82□□□□□ -0.68
SYNGAP1-202ENST00000418600 C8orf17Q9NRJ1 99 aa10.81□□□□□ -0.68
SYNGAP1-202ENST00000418600 SMCPP49901 116 aaPredicted RBP10.8□□□□□ -0.68
SYNGAP1-202ENST00000418600 IGFL1Q6UW32 110 aa10.79□□□□□ -0.68
SYNGAP1-202ENST00000418600 COA5Q86WW8 74 aa10.79□□□□□ -0.68
SYNGAP1-202ENST00000418600 BAHCC1Q9P281 2608 aa10.79□□□□□ -0.68
SYNGAP1-202ENST00000418600 K7EQZ3 153 aa10.79□□□□□ -0.68
SYNGAP1-202ENST00000418600 A0A1B0GVX0 72 aa10.78□□□□□ -0.68
SYNGAP1-202ENST00000418600 PLAC8Q9NZF1 115 aa10.78□□□□□ -0.68
SYNGAP1-202ENST00000418600 MUC4Q99102 2169 aa10.77□□□□□ -0.69
SYNGAP1-202ENST00000418600 PRR15Q8IV56 129 aa10.77□□□□□ -0.69
SYNGAP1-202ENST00000418600 PRO0461Q9UI25 63 aa10.76□□□□□ -0.69
SYNGAP1-202ENST00000418600 USP24Q9UPU5 2620 aa10.73□□□□□ -0.69
SYNGAP1-202ENST00000418600 LITAFQ99732 161 aa10.73□□□□□ -0.69
SYNGAP1-202ENST00000418600 OXTP01178 125 aa10.72□□□□□ -0.69
SYNGAP1-202ENST00000418600 FLNAP21333 2647 aaKnown RBP10.72□□□□□ -0.69
SYNGAP1-202ENST00000418600 FAM229BQ4G0N7 80 aa10.71□□□□□ -0.69
SYNGAP1-202ENST00000418600 ITPR3Q14573 2671 aa10.71□□□□□ -0.69
SYNGAP1-202ENST00000418600 DNAH12Q6ZR08 3092 aa10.71□□□□□ -0.7
SYNGAP1-202ENST00000418600 KRTAP10-1P60331 282 aa10.71□□□□□ -0.7
SYNGAP1-202ENST00000418600 MIR22HGQ0VDD5 57 aa10.69□□□□□ -0.7
SYNGAP1-202ENST00000418600 KRTAP10-2P60368 255 aa10.69□□□□□ -0.7
SYNGAP1-202ENST00000418600 SEC61BP60468 96 aaKnown RBP10.68□□□□□ -0.7
SYNGAP1-202ENST00000418600 C4orf26Q17RF5 130 aa10.66□□□□□ -0.7
SYNGAP1-202ENST00000418600 CD164Q04900 197 aa10.64□□□□□ -0.71
SYNGAP1-202ENST00000418600 Q8N377 158 aa10.62□□□□□ -0.71
SYNGAP1-202ENST00000418600 CFAP46Q8IYW2 2715 aa10.62□□□□□ -0.71
SYNGAP1-202ENST00000418600 A0A0G2JQZ4 141 aa10.61□□□□□ -0.71
SYNGAP1-202ENST00000418600 MGAM2Q2M2H8 2515 aa10.61□□□□□ -0.71
SYNGAP1-202ENST00000418600 A8MUN3 132 aa10.59□□□□□ -0.71
SYNGAP1-202ENST00000418600 CHD7Q9P2D1 2997 aa10.58□□□□□ -0.72
SYNGAP1-202ENST00000418600 KRTAP1-5Q9BYS1 174 aa10.58□□□□□ -0.72
SYNGAP1-202ENST00000418600 CDC42SE1Q9NRR8 79 aa10.57□□□□□ -0.72
SYNGAP1-202ENST00000418600 FAM104AQ969W3 186 aa10.54□□□□□ -0.72
SYNGAP1-202ENST00000418600 CHD9Q3L8U1 2897 aa10.54□□□□□ -0.72
SYNGAP1-202ENST00000418600 KLKP1Q107X0 134 aa10.53□□□□□ -0.72
SYNGAP1-202ENST00000418600 Q6ZR54 194 aa10.53□□□□□ -0.72
SYNGAP1-202ENST00000418600 LINC01554Q52M75 96 aa10.52□□□□□ -0.73
SYNGAP1-202ENST00000418600 SPANXA2-OT1Q8N9U9 137 aa10.49□□□□□ -0.73
SYNGAP1-202ENST00000418600 MAST4O15021 2626 aa10.47□□□□□ -0.73
SYNGAP1-202ENST00000418600 IGLV5-48A0A075B6I7 105 aa10.47□□□□□ -0.73
SYNGAP1-202ENST00000418600 HTTP42858 3142 aa10.45□□□□□ -0.74
SYNGAP1-202ENST00000418600 C5orf42Q9H799 3197 aa10.43□□□□□ -0.74
SYNGAP1-202ENST00000418600 LUZP6Q538Z0 58 aa10.42□□□□□ -0.74
SYNGAP1-202ENST00000418600 A0A0D9SG42 100 aa10.41□□□□□ -0.74
SYNGAP1-202ENST00000418600 LINC00483Q53H64 154 aa10.4□□□□□ -0.75
SYNGAP1-202ENST00000418600 Q8N1X5 172 aa10.4□□□□□ -0.75
SYNGAP1-202ENST00000418600 ZNF292O60281 2723 aa10.39□□□□□ -0.75
SYNGAP1-202ENST00000418600 CAMK2N1Q7Z7J9 78 aa10.38□□□□□ -0.75
SYNGAP1-202ENST00000418600 A0A1W2PNM2 257 aa10.37□□□□□ -0.75
SYNGAP1-202ENST00000418600 ATRQ13535 2644 aa10.36□□□□□ -0.75
SYNGAP1-202ENST00000418600 FP248Q71RG6 208 aaPredicted RBP10.36□□□□□ -0.75
SYNGAP1-202ENST00000418600 EIF4EBP3O60516 100 aaPredicted RBP10.35□□□□□ -0.75
SYNGAP1-202ENST00000418600 LCA10Q71F78 164 aa10.33□□□□□ -0.76
SYNGAP1-202ENST00000418600 HRES1P13985 223 aa10.32□□□□□ -0.76
SYNGAP1-202ENST00000418600 H7BZZ5 65 aa10.31□□□□□ -0.76
SYNGAP1-202ENST00000418600 KTN1-AS1Q86SY8 53 aa10.3□□□□□ -0.76
SYNGAP1-202ENST00000418600 TRANK1O15050 2925 aa10.29□□□□□ -0.76
SYNGAP1-202ENST00000418600 IGSF10Q6WRI0 2623 aa10.28□□□□□ -0.76
SYNGAP1-202ENST00000418600 Q1T7F1 81 aa10.27□□□□□ -0.77
SYNGAP1-202ENST00000418600 AKAP13Q12802 2813 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms