RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	C6orf226	Q5I0X4	101 aa		4.55	□□□□□ -1.68
NIF3L1-206	ENST00000416651	GTF2H5	Q6ZYL4	71 aa		4.55	□□□□□ -1.68
NIF3L1-206	ENST00000416651	ATP5L2	Q7Z4Y8	100 aa		4.55	□□□□□ -1.68
NIF3L1-206	ENST00000416651	SMIM12	Q96EX1	92 aa		4.55	□□□□□ -1.68
NIF3L1-206	ENST00000416651	HSPB8	Q9UJY1	196 aa		4.55	□□□□□ -1.68
NIF3L1-206	ENST00000416651	PRSS2	P07478	247 aa		4.54	□□□□□ -1.68
NIF3L1-206	ENST00000416651	MRPL51	Q4U2R6	128 aa	Known RBP	4.54	□□□□□ -1.68
NIF3L1-206	ENST00000416651	KRTAP5-4	Q6L8H1	288 aa		4.54	□□□□□ -1.68
NIF3L1-206	ENST00000416651	MRPL54	Q6P161	138 aa	Known RBP	4.54	□□□□□ -1.68
NIF3L1-206	ENST00000416651	TMEM136	Q6ZRR5	245 aa		4.54	□□□□□ -1.68
NIF3L1-206	ENST00000416651	FAM231D	Q6ZW35	169 aa		4.54	□□□□□ -1.68
NIF3L1-206	ENST00000416651	ERAS	Q7Z444	233 aa		4.54	□□□□□ -1.68
NIF3L1-206	ENST00000416651	CHCHD1	Q96BP2	118 aa	Known RBP	4.54	□□□□□ -1.68
NIF3L1-206	ENST00000416651	MAP1LC3C	Q9BXW4	147 aa		4.54	□□□□□ -1.68
NIF3L1-206	ENST00000416651		A6NDN8	102 aa		4.53	□□□□□ -1.68
NIF3L1-206	ENST00000416651	MT1F	P04733	61 aa		4.53	□□□□□ -1.68
NIF3L1-206	ENST00000416651	C3orf79	P0CE67	100 aa		4.53	□□□□□ -1.68
NIF3L1-206	ENST00000416651	SMAGP	Q0VAQ4	97 aa		4.53	□□□□□ -1.68
NIF3L1-206	ENST00000416651	SLC25A34	Q6PIV7	304 aa		4.53	□□□□□ -1.68
NIF3L1-206	ENST00000416651	NKAPP1	Q8N9T2	125 aa		4.53	□□□□□ -1.68
NIF3L1-206	ENST00000416651	SPANXA1	Q9NS26	97 aa		4.53	□□□□□ -1.68
NIF3L1-206	ENST00000416651		V9GYV3	84 aa		4.53	□□□□□ -1.68
NIF3L1-206	ENST00000416651	SMIM27	A0A1W2PRY6	76 aa		4.52	□□□□□ -1.69
NIF3L1-206	ENST00000416651		A8MWL6	223 aa		4.52	□□□□□ -1.69
NIF3L1-206	ENST00000416651	CFC1	P0CG37	223 aa		4.52	□□□□□ -1.69
NIF3L1-206	ENST00000416651	KRTAP5-9	P26371	169 aa		4.52	□□□□□ -1.69
NIF3L1-206	ENST00000416651	MOBP	Q13875	183 aa		4.52	□□□□□ -1.69
NIF3L1-206	ENST00000416651	KIAA1644	Q3SXP7	199 aa		4.52	□□□□□ -1.69
NIF3L1-206	ENST00000416651		Q8IZM0	81 aa		4.52	□□□□□ -1.69
NIF3L1-206	ENST00000416651	KRTAP4-4	Q9BYR3	166 aa		4.52	□□□□□ -1.69
NIF3L1-206	ENST00000416651	NDUFA12	Q9UI09	145 aa		4.52	□□□□□ -1.69
NIF3L1-206	ENST00000416651	IGLV9-49	A0A0B4J1Y8	123 aa		4.51	□□□□□ -1.69
NIF3L1-206	ENST00000416651		A0A1B0GUT8	65 aa		4.51	□□□□□ -1.69
NIF3L1-206	ENST00000416651		F8VRH5	84 aa		4.51	□□□□□ -1.69
NIF3L1-206	ENST00000416651	SLC25A20	O43772	301 aa		4.51	□□□□□ -1.69
NIF3L1-206	ENST00000416651	LEPROTL1	O95214	131 aa		4.51	□□□□□ -1.69
NIF3L1-206	ENST00000416651	PPBP	P02775	128 aa		4.51	□□□□□ -1.69
NIF3L1-206	ENST00000416651	SEC11A	P67812	179 aa		4.51	□□□□□ -1.69
NIF3L1-206	ENST00000416651		Q6Q795	121 aa		4.51	□□□□□ -1.69
NIF3L1-206	ENST00000416651	CDKN2A-AS1	Q9UH64	79 aa		4.51	□□□□□ -1.69
NIF3L1-206	ENST00000416651		A0A1B0GW15	77 aa		4.5	□□□□□ -1.69
NIF3L1-206	ENST00000416651	HIGD1C	A8MV81	97 aa		4.5	□□□□□ -1.69
NIF3L1-206	ENST00000416651		J3QR89	54 aa		4.5	□□□□□ -1.69
NIF3L1-206	ENST00000416651	NPY	P01303	97 aa		4.5	□□□□□ -1.69
NIF3L1-206	ENST00000416651	MT3	P25713	68 aa		4.5	□□□□□ -1.69
NIF3L1-206	ENST00000416651	RIG	Q13278	110 aa		4.5	□□□□□ -1.69
NIF3L1-206	ENST00000416651	KRTAP20-1	Q3LI63	56 aa		4.5	□□□□□ -1.69
NIF3L1-206	ENST00000416651	FA2H	Q7L5A8	372 aa		4.5	□□□□□ -1.69
NIF3L1-206	ENST00000416651	ATOH7	Q8N100	152 aa		4.5	□□□□□ -1.69
NIF3L1-206	ENST00000416651	LINC01561	Q8N1V8	128 aa		4.5	□□□□□ -1.69
NIF3L1-206	ENST00000416651	C18orf32	Q8TCD1	76 aa		4.5	□□□□□ -1.69
NIF3L1-206	ENST00000416651	SEC61G	P60059	68 aa		4.49	□□□□□ -1.69
NIF3L1-206	ENST00000416651	HERV-K104	P63124	156 aa		4.49	□□□□□ -1.69
NIF3L1-206	ENST00000416651	KRTAP19-6	Q3LI70	58 aa		4.49	□□□□□ -1.69
NIF3L1-206	ENST00000416651	FAM19A2	Q8N3H0	131 aa		4.49	□□□□□ -1.69
NIF3L1-206	ENST00000416651	SMCR5	Q8TEV8	140 aa		4.49	□□□□□ -1.69
NIF3L1-206	ENST00000416651	SMIM2	Q9BVW6	85 aa		4.49	□□□□□ -1.69
NIF3L1-206	ENST00000416651	GEMIN7	Q9H840	131 aa	Known RBP	4.49	□□□□□ -1.69
NIF3L1-206	ENST00000416651	IGLV5-39	A0A0G2JS06	123 aa		4.48	□□□□□ -1.69
NIF3L1-206	ENST00000416651	SYS1-DBNDD2	H3BUS1	97 aa		4.48	□□□□□ -1.69
NIF3L1-206	ENST00000416651	OCIAD2	Q56VL3	154 aa		4.48	□□□□□ -1.69
NIF3L1-206	ENST00000416651	FAM104B	Q5XKR9	115 aa		4.48	□□□□□ -1.69
NIF3L1-206	ENST00000416651	TMEM141	Q96I45	108 aa		4.48	□□□□□ -1.69
NIF3L1-206	ENST00000416651	CST9L	Q9H4G1	147 aa		4.48	□□□□□ -1.69
NIF3L1-206	ENST00000416651	ERC2-IT1	O76042	136 aa		4.47	□□□□□ -1.69
NIF3L1-206	ENST00000416651	IFI27	P40305	119 aa	Predicted RBP	4.47	□□□□□ -1.69
NIF3L1-206	ENST00000416651	BVES-AS1	Q5T3Y7	98 aa		4.47	□□□□□ -1.69
NIF3L1-206	ENST00000416651	AMELX	Q99217	191 aa		4.47	□□□□□ -1.69
NIF3L1-206	ENST00000416651	C20orf78	Q9BR46	151 aa		4.47	□□□□□ -1.69
NIF3L1-206	ENST00000416651		H3BRM9	83 aa		4.46	□□□□□ -1.7
NIF3L1-206	ENST00000416651	RPS29	P62273	56 aa	Known RBP	4.46	□□□□□ -1.7
NIF3L1-206	ENST00000416651	HSD52	Q0P140	79 aa		4.46	□□□□□ -1.7
NIF3L1-206	ENST00000416651	LINC00483	Q53H64	154 aa		4.46	□□□□□ -1.7
NIF3L1-206	ENST00000416651	C2orf66	Q6UXQ4	117 aa		4.46	□□□□□ -1.7
NIF3L1-206	ENST00000416651	PYGO1	Q9Y3Y4	419 aa		4.46	□□□□□ -1.7
NIF3L1-206	ENST00000416651	MUC12	Q9UKN1	5478 aa		4.45	□□□□□ -1.7
NIF3L1-206	ENST00000416651	SMIM1	B2RUZ4	78 aa		4.45	□□□□□ -1.7
NIF3L1-206	ENST00000416651		D6R8Y8	96 aa		4.45	□□□□□ -1.7
NIF3L1-206	ENST00000416651	TAX1BP3	O14907	124 aa		4.45	□□□□□ -1.7
NIF3L1-206	ENST00000416651	IGLV6-57	P01721	117 aa		4.45	□□□□□ -1.7
NIF3L1-206	ENST00000416651	COX8A	P10176	69 aa		4.45	□□□□□ -1.7
NIF3L1-206	ENST00000416651	FABP2	P12104	132 aa		4.45	□□□□□ -1.7
NIF3L1-206	ENST00000416651	PFN2	P35080	140 aa		4.45	□□□□□ -1.7
NIF3L1-206	ENST00000416651		A0A1B0GXF2	115 aa		4.44	□□□□□ -1.7
NIF3L1-206	ENST00000416651	PPP1R17	O96001	155 aa		4.44	□□□□□ -1.7
NIF3L1-206	ENST00000416651	SCGB1A1	P11684	91 aa		4.44	□□□□□ -1.7
NIF3L1-206	ENST00000416651	CKS2	P33552	79 aa		4.44	□□□□□ -1.7
NIF3L1-206	ENST00000416651	RPL37	P61927	97 aa	Known RBP	4.44	□□□□□ -1.7
NIF3L1-206	ENST00000416651	FAM19A3	Q7Z5A8	133 aa		4.44	□□□□□ -1.7
NIF3L1-206	ENST00000416651	MTURN	Q8N3F0	131 aa		4.44	□□□□□ -1.7
NIF3L1-206	ENST00000416651	COX7B2	Q8TF08	81 aa		4.44	□□□□□ -1.7
NIF3L1-206	ENST00000416651	TIMM17A	Q99595	171 aa		4.44	□□□□□ -1.7
NIF3L1-206	ENST00000416651	SND1-IT1	Q9HBX3	110 aa		4.44	□□□□□ -1.7
NIF3L1-206	ENST00000416651		A0A1B0GV72	72 aa		4.43	□□□□□ -1.7
NIF3L1-206	ENST00000416651		K7EP34	96 aa		4.43	□□□□□ -1.7
NIF3L1-206	ENST00000416651	SMIM13	P0DJ93	91 aa		4.43	□□□□□ -1.7
NIF3L1-206	ENST00000416651	HRCT1	Q6UXD1	115 aa		4.43	□□□□□ -1.7
NIF3L1-206	ENST00000416651	SSBP3-AS1	Q7Z2R9	100 aa		4.43	□□□□□ -1.7
NIF3L1-206	ENST00000416651	LOC389332	A0A1B0GUA5	103 aa		4.42	□□□□□ -1.7
NIF3L1-206	ENST00000416651	SPINK8	P0C7L1	97 aa		4.42	□□□□□ -1.7

Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms