RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 F8WEM9 126 aa6.43□□□□□ -1.38
CD44-206ENST00000415148 KCNQ1DNQ9H478 68 aa6.43□□□□□ -1.38
CD44-206ENST00000415148 ATRQ13535 2644 aa6.43□□□□□ -1.38
CD44-206ENST00000415148 Q6ZRP5 223 aa6.43□□□□□ -1.38
CD44-206ENST00000415148 SYCNQ0VAF6 134 aa6.42□□□□□ -1.38
CD44-206ENST00000415148 Q6ZTC4 211 aa6.42□□□□□ -1.38
CD44-206ENST00000415148 A0A1B0GW54 56 aa6.42□□□□□ -1.38
CD44-206ENST00000415148 NDUFC1O43677 76 aa6.42□□□□□ -1.38
CD44-206ENST00000415148 PLA2G2DQ9UNK4 145 aa6.42□□□□□ -1.38
CD44-206ENST00000415148 TLX1NBP0CAT3 122 aa6.41□□□□□ -1.38
CD44-206ENST00000415148 BPY2O14599 106 aa6.4□□□□□ -1.38
CD44-206ENST00000415148 ERC2-IT1O76042 136 aa6.4□□□□□ -1.38
CD44-206ENST00000415148 FP248Q71RG6 208 aaPredicted RBP6.4□□□□□ -1.38
CD44-206ENST00000415148 TENM3Q9P273 2699 aa6.4□□□□□ -1.38
CD44-206ENST00000415148 IGKV2D-24A0A075B6R9 120 aa6.4□□□□□ -1.39
CD44-206ENST00000415148 NKAPP1Q8N9T2 125 aa6.4□□□□□ -1.39
CD44-206ENST00000415148 LINC00474Q9P2X8 69 aa6.4□□□□□ -1.39
CD44-206ENST00000415148 SERP1Q9Y6X1 66 aa6.4□□□□□ -1.39
CD44-206ENST00000415148 NREPQ16612 68 aa6.39□□□□□ -1.39
CD44-206ENST00000415148 NSD1Q96L73 2696 aaPredicted RBP6.39□□□□□ -1.39
CD44-206ENST00000415148 IGLV5-48A0A075B6I7 105 aa6.39□□□□□ -1.39
CD44-206ENST00000415148 RETNQ9HD89 108 aa6.39□□□□□ -1.39
CD44-206ENST00000415148 DHRS4-AS1Q9P1J3 65 aa6.39□□□□□ -1.39
CD44-206ENST00000415148 F8P00451 2351 aa6.39□□□□□ -1.39
CD44-206ENST00000415148 MAST4O15021 2626 aa6.39□□□□□ -1.39
CD44-206ENST00000415148 DNAH10OSP0CZ25 163 aa6.38□□□□□ -1.39
CD44-206ENST00000415148 IGLV5-37A0A075B6J1 123 aa6.38□□□□□ -1.39
CD44-206ENST00000415148 DEFB131BA0A096LNP1 70 aa6.38□□□□□ -1.39
CD44-206ENST00000415148 KRTAP10-11P60412 298 aa6.38□□□□□ -1.39
CD44-206ENST00000415148 LINC00336Q6ZUF6 198 aa6.38□□□□□ -1.39
CD44-206ENST00000415148 C3orf84H3BNL1 204 aa6.37□□□□□ -1.39
CD44-206ENST00000415148 IGKV4-1P06312 121 aa6.37□□□□□ -1.39
CD44-206ENST00000415148 Q8N377 158 aa6.37□□□□□ -1.39
CD44-206ENST00000415148 C7orf33Q8WU49 177 aa6.37□□□□□ -1.39
CD44-206ENST00000415148 ATP5EP56381 51 aaPredicted RBP6.37□□□□□ -1.39
CD44-206ENST00000415148 FAM229BQ4G0N7 80 aa6.37□□□□□ -1.39
CD44-206ENST00000415148 OXLD1Q5BKU9 147 aa6.37□□□□□ -1.39
CD44-206ENST00000415148 PRYO14603 147 aa6.36□□□□□ -1.39
CD44-206ENST00000415148 DEFB105AQ8NG35 78 aa6.36□□□□□ -1.39
CD44-206ENST00000415148 C11orf45Q8TAV5 145 aa6.36□□□□□ -1.39
CD44-206ENST00000415148 SERTAD4-AS1Q5TG53 156 aa6.36□□□□□ -1.39
CD44-206ENST00000415148 Q6ZRX8 168 aa6.35□□□□□ -1.39
CD44-206ENST00000415148 KRTAP4-16G5E9R7 235 aaPredicted RBP6.35□□□□□ -1.39
CD44-206ENST00000415148 SPRR1AP35321 89 aa6.35□□□□□ -1.39
CD44-206ENST00000415148 MRAPQ8TCY5 172 aa6.35□□□□□ -1.39
CD44-206ENST00000415148 IGLV1-50A0A075B6I6 118 aa6.34□□□□□ -1.39
CD44-206ENST00000415148 TMEM254Q8TBM7 123 aa6.34□□□□□ -1.39
CD44-206ENST00000415148 DNAH1Q9P2D7 4330 aa6.34□□□□□ -1.39
CD44-206ENST00000415148 FUSP35637 526 aaKnown RBP eCLIP6.33□□□□□ -1.4
CD44-206ENST00000415148 CMYA5Q8N3K9 4069 aa6.33□□□□□ -1.4
CD44-206ENST00000415148 OCR1Q9BZK8 76 aa6.32□□□□□ -1.4
CD44-206ENST00000415148 TNP2Q05952 138 aa6.32□□□□□ -1.4
CD44-206ENST00000415148 ETDCA0A1B0GVM5 59 aa6.31□□□□□ -1.4
CD44-206ENST00000415148 Q9BRP9 147 aa6.31□□□□□ -1.4
CD44-206ENST00000415148 HIGD2AQ9BW72 106 aa6.31□□□□□ -1.4
CD44-206ENST00000415148 SMIM26A0A096LP01 95 aa6.3□□□□□ -1.4
CD44-206ENST00000415148 FAM168BA1KXE4 195 aa6.3□□□□□ -1.4
CD44-206ENST00000415148 SPRR4Q96PI1 79 aa6.3□□□□□ -1.4
CD44-206ENST00000415148 A0A0U1RQV1 116 aa6.3□□□□□ -1.4
CD44-206ENST00000415148 A0A1W2PNM2 257 aa6.3□□□□□ -1.4
CD44-206ENST00000415148 RPL37AP8A6NKH3 93 aa6.3□□□□□ -1.4
CD44-206ENST00000415148 C1orf137Q5JT78 98 aa6.3□□□□□ -1.4
CD44-206ENST00000415148 ST20-AS1Q8NBB2 130 aa6.3□□□□□ -1.4
CD44-206ENST00000415148 DNAH10Q8IVF4 4471 aa6.3□□□□□ -1.4
CD44-206ENST00000415148 Q8NBF4 154 aa6.29□□□□□ -1.4
CD44-206ENST00000415148 FAM30AQ9NZY2 134 aa6.29□□□□□ -1.4
CD44-206ENST00000415148 LINC00588Q9Y4M8 146 aa6.29□□□□□ -1.4
CD44-206ENST00000415148 A0A0G2JQZ4 141 aa6.28□□□□□ -1.4
CD44-206ENST00000415148 A0A1W2PNN7 141 aa6.28□□□□□ -1.4
CD44-206ENST00000415148 MRPL55Q7Z7F7 128 aaKnown RBP6.28□□□□□ -1.4
CD44-206ENST00000415148 SMIM29Q86T20 159 aa6.28□□□□□ -1.4
CD44-206ENST00000415148 MPLKIPQ8TAP9 179 aa6.28□□□□□ -1.4
CD44-206ENST00000415148 CASC10Q5T4H9 136 aa6.28□□□□□ -1.4
CD44-206ENST00000415148 KRTAP7-1Q8IUC3 87 aa6.28□□□□□ -1.4
CD44-206ENST00000415148 LYSTQ99698 3801 aa6.26□□□□□ -1.41
CD44-206ENST00000415148 LCE6AA0A183 80 aa6.25□□□□□ -1.41
CD44-206ENST00000415148 REG3GQ6UW15 175 aa6.25□□□□□ -1.41
CD44-206ENST00000415148 PRO0628Q9UI54 55 aa6.25□□□□□ -1.41
CD44-206ENST00000415148 SRRM2Q9UQ35 2752 aaKnown RBP6.24□□□□□ -1.41
CD44-206ENST00000415148 LRCOL1A6NCL2 159 aa6.24□□□□□ -1.41
CD44-206ENST00000415148 UBE2BP63146 152 aa6.24□□□□□ -1.41
CD44-206ENST00000415148 CSMD3Q7Z407 3707 aa6.24□□□□□ -1.41
CD44-206ENST00000415148 DSCR10P59022 87 aa6.23□□□□□ -1.41
CD44-206ENST00000415148 KRTAP24-1Q3LI83 254 aa6.23□□□□□ -1.41
CD44-206ENST00000415148 PKIGQ9Y2B9 76 aa6.22□□□□□ -1.41
CD44-206ENST00000415148 K7EQZ3 153 aa6.22□□□□□ -1.41
CD44-206ENST00000415148 FBN1P35555 2871 aaKnown RBP6.21□□□□□ -1.42
CD44-206ENST00000415148 BRK1Q8WUW1 75 aa6.21□□□□□ -1.42
CD44-206ENST00000415148 DNAH3Q8TD57 4116 aa6.21□□□□□ -1.42
CD44-206ENST00000415148 IGLV8-61A0A075B6I0 122 aa6.21□□□□□ -1.42
CD44-206ENST00000415148 DEFB116Q30KQ4 102 aa6.21□□□□□ -1.42
CD44-206ENST00000415148 NOTCH1P46531 2555 aa6.2□□□□□ -1.42
CD44-206ENST00000415148 LINC00476Q8WZB0 136 aa6.2□□□□□ -1.42
CD44-206ENST00000415148 DNAH9Q9NYC9 4486 aa6.2□□□□□ -1.42
CD44-206ENST00000415148 STAB1Q9NY15 2570 aa6.19□□□□□ -1.42
CD44-206ENST00000415148 C16orf90A8MZG2 172 aa6.19□□□□□ -1.42
CD44-206ENST00000415148 CNBPP62633 177 aaKnown RBP6.18□□□□□ -1.42
CD44-206ENST00000415148 PRR4Q16378 134 aa6.18□□□□□ -1.42
CD44-206ENST00000415148 ZCCHC13Q8WW36 166 aaKnown RBP6.18□□□□□ -1.42
CD44-206ENST00000415148 HCG22E2RYF7 251 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms