RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 LITAFQ99732 161 aa6.36□□□□□ -1.39
A1CF-208ENST00000414883 TRBV10-2A0A0K0K1G8 114 aa6.35□□□□□ -1.39
A1CF-208ENST00000414883 LGALS3P17931 250 aaKnown RBP6.35□□□□□ -1.39
A1CF-208ENST00000414883 PET117Q6UWS5 81 aa6.35□□□□□ -1.39
A1CF-208ENST00000414883 SMCR5Q8TEV8 140 aa6.35□□□□□ -1.39
A1CF-208ENST00000414883 SPRR4Q96PI1 79 aa6.35□□□□□ -1.39
A1CF-208ENST00000414883 TSPAN13O95857 204 aa6.34□□□□□ -1.39
A1CF-208ENST00000414883 IGLV6-57P01721 117 aa6.34□□□□□ -1.39
A1CF-208ENST00000414883 C3orf22Q8N5N4 141 aa6.34□□□□□ -1.39
A1CF-208ENST00000414883 HIGD2AQ9BW72 106 aa6.34□□□□□ -1.39
A1CF-208ENST00000414883 B5MCH6 92 aa6.33□□□□□ -1.4
A1CF-208ENST00000414883 NDUFC2O95298 119 aa6.33□□□□□ -1.4
A1CF-208ENST00000414883 TTTY13Q9BZ97 58 aa6.33□□□□□ -1.4
A1CF-208ENST00000414883 SPANXB1Q9NS25 103 aaPredicted RBP6.33□□□□□ -1.4
A1CF-208ENST00000414883 MUC17Q685J3 4493 aa6.33□□□□□ -1.4
A1CF-208ENST00000414883 KRTAP4-8A0A0G2JLE6 195 aa6.32□□□□□ -1.4
A1CF-208ENST00000414883 ERC2-IT1O76042 136 aa6.32□□□□□ -1.4
A1CF-208ENST00000414883 DDTP30046 118 aa6.32□□□□□ -1.4
A1CF-208ENST00000414883 TIMM17BO60830 172 aa6.31□□□□□ -1.4
A1CF-208ENST00000414883 NPC2P61916 151 aa6.31□□□□□ -1.4
A1CF-208ENST00000414883 PRR4Q16378 134 aa6.31□□□□□ -1.4
A1CF-208ENST00000414883 LINC00304Q8N9R0 145 aa6.31□□□□□ -1.4
A1CF-208ENST00000414883 Q9BRP9 147 aa6.31□□□□□ -1.4
A1CF-208ENST00000414883 ETDCA0A1B0GVM5 59 aa6.3□□□□□ -1.4
A1CF-208ENST00000414883 LINC00483Q53H64 154 aa6.3□□□□□ -1.4
A1CF-208ENST00000414883 LINC00308Q8TCZ7 52 aa6.3□□□□□ -1.4
A1CF-208ENST00000414883 KRTDAPP60985 99 aa6.29□□□□□ -1.4
A1CF-208ENST00000414883 ZNF815PA8K554 130 aa6.28□□□□□ -1.4
A1CF-208ENST00000414883 Q6ZRX8 168 aa6.28□□□□□ -1.4
A1CF-208ENST00000414883 MIEN1Q9BRT3 115 aa6.28□□□□□ -1.4
A1CF-208ENST00000414883 KRTAP9-9Q9BYP9 154 aa6.28□□□□□ -1.4
A1CF-208ENST00000414883 KRTAP9-4Q9BYQ2 154 aa6.28□□□□□ -1.4
A1CF-208ENST00000414883 TRAV23DV6A0A075B6W5 121 aa6.27□□□□□ -1.41
A1CF-208ENST00000414883 CTAG1AP78358 180 aa6.27□□□□□ -1.41
A1CF-208ENST00000414883 PPDPFQ9H3Y8 114 aa6.27□□□□□ -1.41
A1CF-208ENST00000414883 ZNF706Q9Y5V0 76 aaPredicted RBP6.27□□□□□ -1.41
A1CF-208ENST00000414883 ATOH7Q8N100 152 aa6.26□□□□□ -1.41
A1CF-208ENST00000414883 RETNLBQ9BQ08 111 aa6.26□□□□□ -1.41
A1CF-208ENST00000414883 SPANXCQ9NY87 97 aa6.26□□□□□ -1.41
A1CF-208ENST00000414883 ZNF73O43830 326 aaPredicted RBP6.25□□□□□ -1.41
A1CF-208ENST00000414883 S100A7L2Q5SY68 101 aa6.25□□□□□ -1.41
A1CF-208ENST00000414883 HIST3H2BBQ8N257 126 aa6.25□□□□□ -1.41
A1CF-208ENST00000414883 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
A1CF-208ENST00000414883 PCP2Q8IVA1 136 aa6.24□□□□□ -1.41
A1CF-208ENST00000414883 HIST1H2BLQ99880 126 aa6.24□□□□□ -1.41
A1CF-208ENST00000414883 SPANXDQ9BXN6 97 aa6.24□□□□□ -1.41
A1CF-208ENST00000414883 S100A1P23297 94 aa6.23□□□□□ -1.41
A1CF-208ENST00000414883 S100A12P80511 92 aa6.23□□□□□ -1.41
A1CF-208ENST00000414883 GAGE2AQ6NT46 116 aa6.23□□□□□ -1.41
A1CF-208ENST00000414883 Q8NBF4 154 aa6.23□□□□□ -1.41
A1CF-208ENST00000414883 SVIPQ8NHG7 77 aa6.23□□□□□ -1.41
A1CF-208ENST00000414883 C20orf202A1L168 122 aa6.22□□□□□ -1.41
A1CF-208ENST00000414883 SPAG11AQ6PDA7 123 aa6.22□□□□□ -1.41
A1CF-208ENST00000414883 ST20-AS1Q8NBB2 130 aa6.22□□□□□ -1.41
A1CF-208ENST00000414883 FAT4Q6V0I7 4981 aa6.22□□□□□ -1.41
A1CF-208ENST00000414883 JOSD1Q15040 202 aaPredicted RBP6.2□□□□□ -1.42
A1CF-208ENST00000414883 TPRXLQ17RH7 258 aa6.2□□□□□ -1.42
A1CF-208ENST00000414883 MOBPQ13875 183 aa6.19□□□□□ -1.42
A1CF-208ENST00000414883 OR13C6PQ8NH95 151 aa6.19□□□□□ -1.42
A1CF-208ENST00000414883 IGLV7-46A0A075B6I9 117 aa6.18□□□□□ -1.42
A1CF-208ENST00000414883 IGLV9-49A0A0B4J1Y8 123 aa6.18□□□□□ -1.42
A1CF-208ENST00000414883 C5orf52A6NGY3 159 aa6.18□□□□□ -1.42
A1CF-208ENST00000414883 IFITM1P13164 125 aa6.18□□□□□ -1.42
A1CF-208ENST00000414883 SPRR1BP22528 89 aa6.18□□□□□ -1.42
A1CF-208ENST00000414883 AKR1D1P51857 326 aa6.18□□□□□ -1.42
A1CF-208ENST00000414883 ELOF1P60002 83 aaKnown RBP6.18□□□□□ -1.42
A1CF-208ENST00000414883 SCGB1D4Q6XE38 83 aa6.18□□□□□ -1.42
A1CF-208ENST00000414883 SSBP3-AS1Q7Z2R9 100 aa6.18□□□□□ -1.42
A1CF-208ENST00000414883 MUSTN1Q8IVN3 82 aa6.18□□□□□ -1.42
A1CF-208ENST00000414883 LINC00518Q8N0U6 118 aa6.18□□□□□ -1.42
A1CF-208ENST00000414883 SPINK1P00995 79 aa6.17□□□□□ -1.42
A1CF-208ENST00000414883 C6orf99Q4VX62 202 aa6.17□□□□□ -1.42
A1CF-208ENST00000414883 Q6ZVH6 145 aa6.17□□□□□ -1.42
A1CF-208ENST00000414883 CBY1Q9Y3M2 126 aa6.17□□□□□ -1.42
A1CF-208ENST00000414883 SNRPEP62304 92 aaKnown RBP6.16□□□□□ -1.42
A1CF-208ENST00000414883 Q8N377 158 aa6.16□□□□□ -1.42
A1CF-208ENST00000414883 TRBV7-6A0A0J9YX20 115 aa6.15□□□□□ -1.42
A1CF-208ENST00000414883 RPS29P62273 56 aaKnown RBP6.15□□□□□ -1.42
A1CF-208ENST00000414883 FP248Q71RG6 208 aaPredicted RBP6.15□□□□□ -1.42
A1CF-208ENST00000414883 DHRS4-AS1Q9P1J3 65 aa6.15□□□□□ -1.42
A1CF-208ENST00000414883 COX7BP24311 80 aa6.14□□□□□ -1.43
A1CF-208ENST00000414883 S100A2P29034 98 aa6.14□□□□□ -1.43
A1CF-208ENST00000414883 HINT1P49773 126 aaPredicted RBP6.14□□□□□ -1.43
A1CF-208ENST00000414883 LINC01547P58512 204 aaPredicted RBP6.14□□□□□ -1.43
A1CF-208ENST00000414883 KRTAP13-3Q3SY46 172 aa6.14□□□□□ -1.43
A1CF-208ENST00000414883 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
A1CF-208ENST00000414883 COPS9Q8WXC6 57 aa6.13□□□□□ -1.43
A1CF-208ENST00000414883 S100A6P06703 90 aa6.12□□□□□ -1.43
A1CF-208ENST00000414883 C9orf153Q5TBE3 101 aa6.11□□□□□ -1.43
A1CF-208ENST00000414883 SMIM29Q86T20 159 aa6.11□□□□□ -1.43
A1CF-208ENST00000414883 SMIM11BQ8TCY0 68 aa6.11□□□□□ -1.43
A1CF-208ENST00000414883 IGLV5-48A0A075B6I7 105 aa6.1□□□□□ -1.43
A1CF-208ENST00000414883 A0A1B0GWB2 263 aa6.1□□□□□ -1.43
A1CF-208ENST00000414883 A6NDN8 102 aa6.1□□□□□ -1.43
A1CF-208ENST00000414883 TRAV13-2A0A0B4J235 113 aa6.09□□□□□ -1.43
A1CF-208ENST00000414883 A4D1N5 150 aa6.08□□□□□ -1.44
A1CF-208ENST00000414883 HSBP1L1C9JCN9 74 aa6.08□□□□□ -1.44
A1CF-208ENST00000414883 SLC25A20O43772 301 aa6.08□□□□□ -1.44
A1CF-208ENST00000414883 TEX49A0A1B0GTD5 131 aa6.07□□□□□ -1.44
A1CF-208ENST00000414883 SCGB1D1O95968 90 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms