RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 LINC00336Q6ZUF6 198 aa12.21□□□□□ -0.45
SHANK3-202ENST00000414786 MUC22E2RYF6 1773 aaPredicted RBP12.21□□□□□ -0.46
SHANK3-202ENST00000414786 H3BPC8 53 aa12.2□□□□□ -0.46
SHANK3-202ENST00000414786 CDC42SE1Q9NRR8 79 aa12.2□□□□□ -0.46
SHANK3-202ENST00000414786 USP9XQ93008 2570 aaPredicted RBP12.19□□□□□ -0.46
SHANK3-202ENST00000414786 A0A1B0GVX0 72 aa12.17□□□□□ -0.46
SHANK3-202ENST00000414786 LOC110117498A0A087WWA1 95 aa12.17□□□□□ -0.46
SHANK3-202ENST00000414786 PLA2G2DQ9UNK4 145 aa12.17□□□□□ -0.46
SHANK3-202ENST00000414786 PRR15Q8IV56 129 aa12.14□□□□□ -0.47
SHANK3-202ENST00000414786 PSORS1C2Q9UIG4 136 aa12.14□□□□□ -0.47
SHANK3-202ENST00000414786 CASC10Q5T4H9 136 aa12.13□□□□□ -0.47
SHANK3-202ENST00000414786 IGLV7-43P04211 117 aa12.12□□□□□ -0.47
SHANK3-202ENST00000414786 RPS28P62857 69 aaKnown RBP12.11□□□□□ -0.47
SHANK3-202ENST00000414786 ANKRD17O75179 2603 aaKnown RBP12.09□□□□□ -0.47
SHANK3-202ENST00000414786 PRO0461Q9UI25 63 aa12.09□□□□□ -0.47
SHANK3-202ENST00000414786 GOLGB1Q14789 3259 aaKnown RBP12.09□□□□□ -0.47
SHANK3-202ENST00000414786 TLX1NBP0CAT3 122 aa12.08□□□□□ -0.48
SHANK3-202ENST00000414786 PRR26Q8N8Z3 221 aa12.08□□□□□ -0.48
SHANK3-202ENST00000414786 BPTFQ12830 3046 aa12.07□□□□□ -0.48
SHANK3-202ENST00000414786 LINC01546A6NGU7 62 aa12.06□□□□□ -0.48
SHANK3-202ENST00000414786 IGLV7-46A0A075B6I9 117 aa12.06□□□□□ -0.48
SHANK3-202ENST00000414786 FAM104AQ969W3 186 aa12.06□□□□□ -0.48
SHANK3-202ENST00000414786 LINC00483Q53H64 154 aa12.05□□□□□ -0.48
SHANK3-202ENST00000414786 KRTAP10-3P60369 221 aa12.04□□□□□ -0.48
SHANK3-202ENST00000414786 Q8N377 158 aa12.02□□□□□ -0.48
SHANK3-202ENST00000414786 PIEZO1Q92508 2521 aa12.01□□□□□ -0.49
SHANK3-202ENST00000414786 SPTBN4Q9H254 2564 aa12□□□□□ -0.49
SHANK3-202ENST00000414786 ERC2-IT1O76042 136 aa11.99□□□□□ -0.49
SHANK3-202ENST00000414786 A0A1B0GW54 56 aa11.99□□□□□ -0.49
SHANK3-202ENST00000414786 PCSK5Q92824 1860 aa11.99□□□□□ -0.49
SHANK3-202ENST00000414786 TNP2Q05952 138 aa11.98□□□□□ -0.49
SHANK3-202ENST00000414786 KCNQ1DNQ9H478 68 aa11.98□□□□□ -0.49
SHANK3-202ENST00000414786 CR1P17927 2039 aa11.97□□□□□ -0.49
SHANK3-202ENST00000414786 LINC00612Q8N6U2 182 aa11.95□□□□□ -0.5
SHANK3-202ENST00000414786 CD164Q04900 197 aa11.95□□□□□ -0.5
SHANK3-202ENST00000414786 USP9YO00507 2555 aaPredicted RBP11.94□□□□□ -0.5
SHANK3-202ENST00000414786 CYP4F30PQ9H0H9 118 aa11.94□□□□□ -0.5
SHANK3-202ENST00000414786 MTORP42345 2549 aa11.94□□□□□ -0.5
SHANK3-202ENST00000414786 COL4A2P08572 1712 aa11.93□□□□□ -0.5
SHANK3-202ENST00000414786 USP24Q9UPU5 2620 aa11.92□□□□□ -0.5
SHANK3-202ENST00000414786 POLQO75417 2590 aa11.92□□□□□ -0.5
SHANK3-202ENST00000414786 EIF4EBP3O60516 100 aaPredicted RBP11.91□□□□□ -0.5
SHANK3-202ENST00000414786 ANKRD11Q6UB99 2663 aaPredicted RBP11.9□□□□□ -0.5
SHANK3-202ENST00000414786 SPRR4Q96PI1 79 aa11.89□□□□□ -0.51
SHANK3-202ENST00000414786 C9orf163Q8N9P6 203 aa11.87□□□□□ -0.51
SHANK3-202ENST00000414786 Q5VSD8 79 aa11.85□□□□□ -0.51
SHANK3-202ENST00000414786 LITAFQ99732 161 aa11.85□□□□□ -0.51
SHANK3-202ENST00000414786 FLG2Q5D862 2391 aaPredicted RBP11.84□□□□□ -0.51
SHANK3-202ENST00000414786 EP400Q96L91 3159 aa11.83□□□□□ -0.52
SHANK3-202ENST00000414786 C19orf73Q9NVV2 129 aa11.83□□□□□ -0.52
SHANK3-202ENST00000414786 S4R3F8 94 aa11.81□□□□□ -0.52
SHANK3-202ENST00000414786 KTN1-AS1Q86SY8 53 aa11.8□□□□□ -0.52
SHANK3-202ENST00000414786 Q1T7F1 81 aa11.79□□□□□ -0.52
SHANK3-202ENST00000414786 CHD8Q9HCK8 2581 aa11.77□□□□□ -0.52
SHANK3-202ENST00000414786 LCA10Q71F78 164 aa11.77□□□□□ -0.53
SHANK3-202ENST00000414786 A0A1B0GU33 70 aa11.75□□□□□ -0.53
SHANK3-202ENST00000414786 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.72□□□□□ -0.53
SHANK3-202ENST00000414786 H7BZZ5 65 aa11.7□□□□□ -0.54
SHANK3-202ENST00000414786 A0A1W2PNM2 257 aa11.69□□□□□ -0.54
SHANK3-202ENST00000414786 PRR34Q9NV39 138 aa11.69□□□□□ -0.54
SHANK3-202ENST00000414786 R4GN34 69 aa11.69□□□□□ -0.54
SHANK3-202ENST00000414786 GIG44P09565 113 aaPredicted RBP11.68□□□□□ -0.54
SHANK3-202ENST00000414786 KLKP1Q107X0 134 aa11.67□□□□□ -0.54
SHANK3-202ENST00000414786 FASNP49327 2511 aaKnown RBP11.67□□□□□ -0.54
SHANK3-202ENST00000414786 PRRC2CQ9Y520 2896 aaKnown RBP11.65□□□□□ -0.54
SHANK3-202ENST00000414786 HRES1P13985 223 aa11.65□□□□□ -0.54
SHANK3-202ENST00000414786 CSAG1Q6PB30 78 aa11.65□□□□□ -0.54
SHANK3-202ENST00000414786 SPINK7P58062 85 aa11.62□□□□□ -0.55
SHANK3-202ENST00000414786 H1FX-AS1Q4G0G2 97 aa11.61□□□□□ -0.55
SHANK3-202ENST00000414786 CEP350Q5VT06 3117 aa11.58□□□□□ -0.56
SHANK3-202ENST00000414786 PLAC4Q8WY50 150 aa11.58□□□□□ -0.56
SHANK3-202ENST00000414786 PRAC1Q96KF2 57 aa11.58□□□□□ -0.56
SHANK3-202ENST00000414786 UTRNP46939 3433 aa11.58□□□□□ -0.56
SHANK3-202ENST00000414786 C10orf142B7Z368 130 aa11.56□□□□□ -0.56
SHANK3-202ENST00000414786 CNBPP62633 177 aaKnown RBP11.55□□□□□ -0.56
SHANK3-202ENST00000414786 DNAH12Q6ZR08 3092 aa11.54□□□□□ -0.56
SHANK3-202ENST00000414786 CEP295Q9C0D2 2601 aa11.54□□□□□ -0.56
SHANK3-202ENST00000414786 Q8N9P0 234 aaPredicted RBP11.53□□□□□ -0.56
SHANK3-202ENST00000414786 M0QZ58 72 aa11.5□□□□□ -0.57
SHANK3-202ENST00000414786 ZCCHC13Q8WW36 166 aaKnown RBP11.47□□□□□ -0.57
SHANK3-202ENST00000414786 A0A0A0MQY5 61 aa11.45□□□□□ -0.58
SHANK3-202ENST00000414786 SPANXA2-OT1Q8N9U9 137 aa11.44□□□□□ -0.58
SHANK3-202ENST00000414786 SEC61BP60468 96 aaKnown RBP11.43□□□□□ -0.58
SHANK3-202ENST00000414786 MGAM2Q2M2H8 2515 aa11.41□□□□□ -0.58
SHANK3-202ENST00000414786 DMAC1Q96GE9 116 aa11.4□□□□□ -0.58
SHANK3-202ENST00000414786 C5orf42Q9H799 3197 aa11.39□□□□□ -0.59
SHANK3-202ENST00000414786 EPG5Q9HCE0 2579 aa11.39□□□□□ -0.59
SHANK3-202ENST00000414786 H3BS24 57 aa11.38□□□□□ -0.59
SHANK3-202ENST00000414786 A0A096LNT2 108 aa11.34□□□□□ -0.59
SHANK3-202ENST00000414786 FAM229BQ4G0N7 80 aa11.33□□□□□ -0.6
SHANK3-202ENST00000414786 ADM2Q7Z4H4 148 aa11.33□□□□□ -0.6
SHANK3-202ENST00000414786 KRTAP1-3Q8IUG1 177 aa11.31□□□□□ -0.6
SHANK3-202ENST00000414786 OCR1Q9BZK8 76 aa11.29□□□□□ -0.6
SHANK3-202ENST00000414786 Q5W150 140 aa11.28□□□□□ -0.6
SHANK3-202ENST00000414786 SPATA8Q6RVD6 105 aa11.28□□□□□ -0.6
SHANK3-202ENST00000414786 PCNTO95613 3336 aa11.26□□□□□ -0.61
SHANK3-202ENST00000414786 KRTAP1-1Q07627 177 aa11.24□□□□□ -0.61
SHANK3-202ENST00000414786 KRTAP10-2P60368 255 aa11.22□□□□□ -0.61
SHANK3-202ENST00000414786 AKAP13Q12802 2813 aa11.22□□□□□ -0.61
SHANK3-202ENST00000414786 ATRQ13535 2644 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms