RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 KCNQ1DNQ9H478 68 aa12.44□□□□□ -0.42
TNFRSF8-202ENST00000413146 KLKP1Q107X0 134 aa12.43□□□□□ -0.42
TNFRSF8-202ENST00000413146 H7BZZ5 65 aa12.42□□□□□ -0.42
TNFRSF8-202ENST00000413146 SERTAD4-AS1Q5TG53 156 aa12.42□□□□□ -0.42
TNFRSF8-202ENST00000413146 C11orf45Q8TAV5 145 aa12.42□□□□□ -0.42
TNFRSF8-202ENST00000413146 C7orf33Q8WU49 177 aa12.42□□□□□ -0.42
TNFRSF8-202ENST00000413146 DEFB105AQ8NG35 78 aa12.4□□□□□ -0.42
TNFRSF8-202ENST00000413146 SNURFQ9Y675 71 aa12.4□□□□□ -0.43
TNFRSF8-202ENST00000413146 PKD1L1Q8TDX9 2849 aa12.39□□□□□ -0.43
TNFRSF8-202ENST00000413146 NREPQ16612 68 aa12.39□□□□□ -0.43
TNFRSF8-202ENST00000413146 TM2D3Q9BRN9 247 aa12.39□□□□□ -0.43
TNFRSF8-202ENST00000413146 DNAH10OSP0CZ25 163 aa12.38□□□□□ -0.43
TNFRSF8-202ENST00000413146 RMI2Q96E14 147 aa12.37□□□□□ -0.43
TNFRSF8-202ENST00000413146 Q8N377 158 aa12.36□□□□□ -0.43
TNFRSF8-202ENST00000413146 C3orf84H3BNL1 204 aa12.36□□□□□ -0.43
TNFRSF8-202ENST00000413146 BPY2O14599 106 aa12.36□□□□□ -0.43
TNFRSF8-202ENST00000413146 TLX1NBP0CAT3 122 aa12.36□□□□□ -0.43
TNFRSF8-202ENST00000413146 Q8N9L7 120 aa12.35□□□□□ -0.43
TNFRSF8-202ENST00000413146 DHRS4-AS1Q9P1J3 65 aa12.35□□□□□ -0.43
TNFRSF8-202ENST00000413146 IGKV4-1P06312 121 aa12.34□□□□□ -0.43
TNFRSF8-202ENST00000413146 PLA2G2DQ9UNK4 145 aa12.34□□□□□ -0.43
TNFRSF8-202ENST00000413146 IGLV5-48A0A075B6I7 105 aa12.33□□□□□ -0.44
TNFRSF8-202ENST00000413146 RPL37AP8A6NKH3 93 aa12.33□□□□□ -0.44
TNFRSF8-202ENST00000413146 F8WEM9 126 aa12.33□□□□□ -0.44
TNFRSF8-202ENST00000413146 Q6ZRX8 168 aa12.33□□□□□ -0.44
TNFRSF8-202ENST00000413146 KRTAP24-1Q3LI83 254 aa12.33□□□□□ -0.44
TNFRSF8-202ENST00000413146 MRAPQ8TCY5 172 aa12.33□□□□□ -0.44
TNFRSF8-202ENST00000413146 SEC61GP60059 68 aa12.32□□□□□ -0.44
TNFRSF8-202ENST00000413146 PRYO14603 147 aa12.32□□□□□ -0.44
TNFRSF8-202ENST00000413146 SERP1Q9Y6X1 66 aa12.32□□□□□ -0.44
TNFRSF8-202ENST00000413146 TENM3Q9P273 2699 aa12.31□□□□□ -0.44
TNFRSF8-202ENST00000413146 ETDCA0A1B0GVM5 59 aa12.3□□□□□ -0.44
TNFRSF8-202ENST00000413146 NDUFC1O43677 76 aa12.3□□□□□ -0.44
TNFRSF8-202ENST00000413146 FAM168BA1KXE4 195 aa12.3□□□□□ -0.44
TNFRSF8-202ENST00000413146 FUSP35637 526 aaKnown RBP eCLIP12.3□□□□□ -0.44
TNFRSF8-202ENST00000413146 IGLV1-50A0A075B6I6 118 aa12.29□□□□□ -0.44
TNFRSF8-202ENST00000413146 Q5XG85 94 aa12.29□□□□□ -0.44
TNFRSF8-202ENST00000413146 Q9BRP9 147 aa12.29□□□□□ -0.44
TNFRSF8-202ENST00000413146 IGLV5-37A0A075B6J1 123 aa12.29□□□□□ -0.44
TNFRSF8-202ENST00000413146 KRTAP4-16G5E9R7 235 aaPredicted RBP12.28□□□□□ -0.44
TNFRSF8-202ENST00000413146 LINC00588Q9Y4M8 146 aa12.27□□□□□ -0.44
TNFRSF8-202ENST00000413146 ERC2-IT1O76042 136 aa12.27□□□□□ -0.45
TNFRSF8-202ENST00000413146 C4orf26Q17RF5 130 aa12.27□□□□□ -0.45
TNFRSF8-202ENST00000413146 CASC10Q5T4H9 136 aa12.27□□□□□ -0.45
TNFRSF8-202ENST00000413146 TMEM254Q8TBM7 123 aa12.27□□□□□ -0.45
TNFRSF8-202ENST00000413146 SPRR1AP35321 89 aa12.26□□□□□ -0.45
TNFRSF8-202ENST00000413146 EPM2AB3EWF7 344 aa12.26□□□□□ -0.45
TNFRSF8-202ENST00000413146 A0A1B0GW54 56 aa12.25□□□□□ -0.45
TNFRSF8-202ENST00000413146 ANK2Q01484 3957 aa12.25□□□□□ -0.45
TNFRSF8-202ENST00000413146 C1orf137Q5JT78 98 aa12.24□□□□□ -0.45
TNFRSF8-202ENST00000413146 ST20-AS1Q8NBB2 130 aa12.23□□□□□ -0.45
TNFRSF8-202ENST00000413146 A0A1W2PNM2 257 aa12.23□□□□□ -0.45
TNFRSF8-202ENST00000413146 OCR1Q9BZK8 76 aa12.23□□□□□ -0.45
TNFRSF8-202ENST00000413146 TNP2Q05952 138 aa12.22□□□□□ -0.45
TNFRSF8-202ENST00000413146 MRPL55Q7Z7F7 128 aaKnown RBP12.22□□□□□ -0.45
TNFRSF8-202ENST00000413146 KRTAP7-1Q8IUC3 87 aa12.22□□□□□ -0.45
TNFRSF8-202ENST00000413146 ATP5EP56381 51 aaPredicted RBP12.21□□□□□ -0.45
TNFRSF8-202ENST00000413146 HRCT1Q6UXD1 115 aa12.21□□□□□ -0.46
TNFRSF8-202ENST00000413146 Q8NBF4 154 aa12.2□□□□□ -0.46
TNFRSF8-202ENST00000413146 UBE2BP63146 152 aa12.19□□□□□ -0.46
TNFRSF8-202ENST00000413146 A0A0U1RQV1 116 aa12.15□□□□□ -0.46
TNFRSF8-202ENST00000413146 SPRR4Q96PI1 79 aa12.15□□□□□ -0.46
TNFRSF8-202ENST00000413146 CMYA5Q8N3K9 4069 aa12.15□□□□□ -0.47
TNFRSF8-202ENST00000413146 REG3GQ6UW15 175 aa12.14□□□□□ -0.47
TNFRSF8-202ENST00000413146 SMIM29Q86T20 159 aa12.14□□□□□ -0.47
TNFRSF8-202ENST00000413146 SMIM26A0A096LP01 95 aa12.12□□□□□ -0.47
TNFRSF8-202ENST00000413146 FAM30AQ9NZY2 134 aa12.11□□□□□ -0.47
TNFRSF8-202ENST00000413146 PRB2P02812 416 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF8-202ENST00000413146 STAB1Q9NY15 2570 aa12.1□□□□□ -0.47
TNFRSF8-202ENST00000413146 HIGD2AQ9BW72 106 aa12.1□□□□□ -0.47
TNFRSF8-202ENST00000413146 DNAH1Q9P2D7 4330 aa12.09□□□□□ -0.47
TNFRSF8-202ENST00000413146 DNAH3Q8TD57 4116 aa12.08□□□□□ -0.48
TNFRSF8-202ENST00000413146 DSCR10P59022 87 aa12.07□□□□□ -0.48
TNFRSF8-202ENST00000413146 LINC00476Q8WZB0 136 aa12.07□□□□□ -0.48
TNFRSF8-202ENST00000413146 FBN1P35555 2871 aaKnown RBP12.07□□□□□ -0.48
TNFRSF8-202ENST00000413146 FP248Q71RG6 208 aaPredicted RBP12.06□□□□□ -0.48
TNFRSF8-202ENST00000413146 K7EQZ3 153 aa12.05□□□□□ -0.48
TNFRSF8-202ENST00000413146 MAST4O15021 2626 aa12.04□□□□□ -0.48
TNFRSF8-202ENST00000413146 A0A096LNI7 61 aa12.03□□□□□ -0.48
TNFRSF8-202ENST00000413146 IGKV2-24A0A0C4DH68 120 aa12.03□□□□□ -0.48
TNFRSF8-202ENST00000413146 LCE6AA0A183 80 aa12.01□□□□□ -0.49
TNFRSF8-202ENST00000413146 C16orf90A8MZG2 172 aa12.01□□□□□ -0.49
TNFRSF8-202ENST00000413146 PRLHP81277 87 aa12.01□□□□□ -0.49
TNFRSF8-202ENST00000413146 NOTCH1P46531 2555 aa12.01□□□□□ -0.49
TNFRSF8-202ENST00000413146 IGFL1Q6UW32 110 aa12.01□□□□□ -0.49
TNFRSF8-202ENST00000413146 LINC00474Q9P2X8 69 aa12□□□□□ -0.49
TNFRSF8-202ENST00000413146 A0A0G2JQZ4 141 aa11.99□□□□□ -0.49
TNFRSF8-202ENST00000413146 A0A1W2PNN7 141 aa11.99□□□□□ -0.49
TNFRSF8-202ENST00000413146 K7EIL1 84 aa11.99□□□□□ -0.49
TNFRSF8-202ENST00000413146 PSCAO43653 123 aa11.98□□□□□ -0.49
TNFRSF8-202ENST00000413146 HCG22E2RYF7 251 aa11.98□□□□□ -0.49
TNFRSF8-202ENST00000413146 CNBPP62633 177 aaKnown RBP11.98□□□□□ -0.49
TNFRSF8-202ENST00000413146 C4orf48Q5BLP8 95 aa11.97□□□□□ -0.49
TNFRSF8-202ENST00000413146 KRTAP1-5Q9BYS1 174 aa11.97□□□□□ -0.49
TNFRSF8-202ENST00000413146 HUWE1Q7Z6Z7 4374 aaKnown RBP11.95□□□□□ -0.5
TNFRSF8-202ENST00000413146 IGLV8-61A0A075B6I0 122 aa11.94□□□□□ -0.5
TNFRSF8-202ENST00000413146 FAM229BQ4G0N7 80 aa11.94□□□□□ -0.5
TNFRSF8-202ENST00000413146 A0A087WSZ3 146 aa11.93□□□□□ -0.5
TNFRSF8-202ENST00000413146 UBE2AP49459 152 aa11.92□□□□□ -0.5
TNFRSF8-202ENST00000413146 DEFB116Q30KQ4 102 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms