RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 C1orf137Q5JT78 98 aa3.2□□□□□ -1.9
HERC4-205ENST00000412272 C7orf33Q8WU49 177 aa3.2□□□□□ -1.9
HERC4-205ENST00000412272 DEFB131BA0A096LNP1 70 aa3.19□□□□□ -1.9
HERC4-205ENST00000412272 SPRR1AP35321 89 aa3.19□□□□□ -1.9
HERC4-205ENST00000412272 PCOTHQ58A44 107 aa3.19□□□□□ -1.9
HERC4-205ENST00000412272 UNQ6190/PRO20217Q6UXQ8 127 aa3.19□□□□□ -1.9
HERC4-205ENST00000412272 MSMBP08118 114 aa3.19□□□□□ -1.9
HERC4-205ENST00000412272 NOP10Q9NPE3 64 aaKnown RBP3.19□□□□□ -1.9
HERC4-205ENST00000412272 C6orf48Q9UBA6 75 aa3.19□□□□□ -1.9
HERC4-205ENST00000412272 ASH1LQ9NR48 2969 aaKnown RBP3.19□□□□□ -1.9
HERC4-205ENST00000412272 TACC2O95359 2948 aa3.19□□□□□ -1.9
HERC4-205ENST00000412272 ZNF469Q96JG9 3925 aaPredicted RBP3.19□□□□□ -1.9
HERC4-205ENST00000412272 UQCR11O14957 56 aa3.19□□□□□ -1.9
HERC4-205ENST00000412272 EGFEM1PQ0D2K5 195 aa3.19□□□□□ -1.9
HERC4-205ENST00000412272 KRTAP15-1Q3LI76 137 aa3.19□□□□□ -1.9
HERC4-205ENST00000412272 C4orf3Q8WVX3 66 aa3.18□□□□□ -1.9
HERC4-205ENST00000412272 WNK1Q9H4A3 2382 aa3.18□□□□□ -1.9
HERC4-205ENST00000412272 CEP250Q9BV73 2442 aa3.18□□□□□ -1.9
HERC4-205ENST00000412272 PIEZO2Q9H5I5 2752 aa3.17□□□□□ -1.9
HERC4-205ENST00000412272 IGLV10-54A0A075B6I4 117 aa3.17□□□□□ -1.9
HERC4-205ENST00000412272 A0A087WTM6 91 aa3.17□□□□□ -1.9
HERC4-205ENST00000412272 ATMQ13315 3056 aa3.17□□□□□ -1.9
HERC4-205ENST00000412272 CACNA1AO00555 2505 aa3.17□□□□□ -1.9
HERC4-205ENST00000412272 Q6ZRX8 168 aa3.17□□□□□ -1.9
HERC4-205ENST00000412272 TP53AIP1Q9HCN2 124 aa3.17□□□□□ -1.9
HERC4-205ENST00000412272 LY6EQ16553 131 aa3.16□□□□□ -1.9
HERC4-205ENST00000412272 A0A1B0GU69 56 aa3.16□□□□□ -1.9
HERC4-205ENST00000412272 PKDREJQ9NTG1 2253 aa3.16□□□□□ -1.9
HERC4-205ENST00000412272 IGF2RP11717 2491 aa3.15□□□□□ -1.9
HERC4-205ENST00000412272 SPTBN2O15020 2390 aa3.15□□□□□ -1.9
HERC4-205ENST00000412272 NUPR2A6NF83 97 aa3.15□□□□□ -1.9
HERC4-205ENST00000412272 Q5W150 140 aa3.15□□□□□ -1.9
HERC4-205ENST00000412272 BRD3OSQ6XYD6 125 aa3.15□□□□□ -1.9
HERC4-205ENST00000412272 AKAP13Q12802 2813 aa3.15□□□□□ -1.9
HERC4-205ENST00000412272 RPL37AP8A6NKH3 93 aa3.15□□□□□ -1.91
HERC4-205ENST00000412272 SLURP1P55000 103 aa3.15□□□□□ -1.91
HERC4-205ENST00000412272 CACNA1BQ00975 2339 aa3.15□□□□□ -1.91
HERC4-205ENST00000412272 C10orf99Q6UWK7 81 aa3.15□□□□□ -1.91
HERC4-205ENST00000412272 CLPSL2Q6UWE3 100 aa3.14□□□□□ -1.91
HERC4-205ENST00000412272 LINC00304Q8N9R0 145 aa3.14□□□□□ -1.91
HERC4-205ENST00000412272 IGKV2-24A0A0C4DH68 120 aa3.14□□□□□ -1.91
HERC4-205ENST00000412272 PRO0255Q9UI72 69 aa3.14□□□□□ -1.91
HERC4-205ENST00000412272 PCNX1Q96RV3 2341 aa3.14□□□□□ -1.91
HERC4-205ENST00000412272 TLX1NBP0CAT3 122 aa3.14□□□□□ -1.91
HERC4-205ENST00000412272 RPL37AP61513 92 aaKnown RBP3.14□□□□□ -1.91
HERC4-205ENST00000412272 DMAC1Q96GE9 116 aa3.14□□□□□ -1.91
HERC4-205ENST00000412272 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.13□□□□□ -1.911e-6■■■■□ 23.2
HERC4-205ENST00000412272 TRIOBPQ9H2D6 2365 aa3.13□□□□□ -1.91
HERC4-205ENST00000412272 FAM168BA1KXE4 195 aa3.12□□□□□ -1.91
HERC4-205ENST00000412272 MMP24-AS1A0A0U1RRL7 71 aa3.12□□□□□ -1.91
HERC4-205ENST00000412272 A0A1W2PPR1 153 aa3.12□□□□□ -1.91
HERC4-205ENST00000412272 DEFB105AQ8NG35 78 aa3.12□□□□□ -1.91
HERC4-205ENST00000412272 LELP1Q5T871 98 aa3.12□□□□□ -1.91
HERC4-205ENST00000412272 ANGP03950 147 aaKnown RBP3.11□□□□□ -1.91
HERC4-205ENST00000412272 GPR179Q6PRD1 2367 aa3.11□□□□□ -1.91
HERC4-205ENST00000412272 K7ERS5 55 aa3.11□□□□□ -1.91
HERC4-205ENST00000412272 IGFL1Q6UW32 110 aa3.11□□□□□ -1.91
HERC4-205ENST00000412272 CNOT1A5YKK6 2376 aaKnown RBP3.11□□□□□ -1.91
HERC4-205ENST00000412272 CIRBP-AS1Q8TBR5 109 aa3.11□□□□□ -1.91
HERC4-205ENST00000412272 APC2O95996 2303 aa3.11□□□□□ -1.91
HERC4-205ENST00000412272 Q6YL49 198 aa3.11□□□□□ -1.91
HERC4-205ENST00000412272 COL6A6A6NMZ7 2263 aa3.1□□□□□ -1.91
HERC4-205ENST00000412272 CELSR1Q9NYQ6 3014 aa3.1□□□□□ -1.91
HERC4-205ENST00000412272 IGLV7-43P04211 117 aa3.09□□□□□ -1.91
HERC4-205ENST00000412272 SPRR1BP22528 89 aa3.09□□□□□ -1.91
HERC4-205ENST00000412272 CAMK2N2Q96S95 79 aa3.09□□□□□ -1.91
HERC4-205ENST00000412272 SPINT4Q6UDR6 99 aa3.09□□□□□ -1.91
HERC4-205ENST00000412272 CELSR2Q9HCU4 2923 aa3.09□□□□□ -1.91
HERC4-205ENST00000412272 PTPRZ1P23471 2315 aaPredicted RBP3.09□□□□□ -1.91
HERC4-205ENST00000412272 C15orf56Q8N910 161 aa3.09□□□□□ -1.92
HERC4-205ENST00000412272 Q96NJ1 140 aa3.08□□□□□ -1.92
HERC4-205ENST00000412272 KMT2BQ9UMN6 2715 aaPredicted RBP3.08□□□□□ -1.92
HERC4-205ENST00000412272 PKD1L2Q7Z442 2459 aa3.08□□□□□ -1.92
HERC4-205ENST00000412272 RP1L1Q8IWN7 2480 aaPredicted RBP3.08□□□□□ -1.92
HERC4-205ENST00000412272 ABCA2Q9BZC7 2435 aa3.08□□□□□ -1.92
HERC4-205ENST00000412272 CRIPTQ9P021 101 aa3.08□□□□□ -1.92
HERC4-205ENST00000412272 CMYA5Q8N3K9 4069 aa3.08□□□□□ -1.92
HERC4-205ENST00000412272 ACYP2P14621 99 aa3.08□□□□□ -1.92
HERC4-205ENST00000412272 AKAP6Q13023 2319 aa3.07□□□□□ -1.92
HERC4-205ENST00000412272 CCL19Q99731 98 aa3.07□□□□□ -1.92
HERC4-205ENST00000412272 DEFB136Q30KP8 78 aa3.07□□□□□ -1.92
HERC4-205ENST00000412272 A0A0G2JQZ4 141 aa3.07□□□□□ -1.92
HERC4-205ENST00000412272 A0A1W2PNN7 141 aa3.07□□□□□ -1.92
HERC4-205ENST00000412272 KRTAP13-3Q3SY46 172 aa3.06□□□□□ -1.92
HERC4-205ENST00000412272 ZDBF2Q9HCK1 2354 aa3.06□□□□□ -1.92
HERC4-205ENST00000412272 KRTAP11-1Q8IUC1 163 aa3.06□□□□□ -1.92
HERC4-205ENST00000412272 PRRC2CQ9Y520 2896 aaKnown RBP3.06□□□□□ -1.92
HERC4-205ENST00000412272 ITPR1Q14643 2758 aa3.06□□□□□ -1.92
HERC4-205ENST00000412272 CRYBG3Q68DQ2 2970 aa3.05□□□□□ -1.92
HERC4-205ENST00000412272 TENM2Q9NT68 2774 aa3.05□□□□□ -1.92
HERC4-205ENST00000412272 ACACAQ13085 2346 aa3.05□□□□□ -1.92
HERC4-205ENST00000412272 DCHS2Q6V1P9 2916 aa3.05□□□□□ -1.92
HERC4-205ENST00000412272 GVINP1Q7Z2Y8 2422 aa3.05□□□□□ -1.92
HERC4-205ENST00000412272 CSMD3Q7Z407 3707 aa3.05□□□□□ -1.92
HERC4-205ENST00000412272 PANO1I0J062 215 aa3.04□□□□□ -1.92
HERC4-205ENST00000412272 ROS1P08922 2347 aa3.04□□□□□ -1.92
HERC4-205ENST00000412272 MAP1AP78559 2803 aaPredicted RBP3.04□□□□□ -1.92
HERC4-205ENST00000412272 A0A1B0GVX0 72 aa3.04□□□□□ -1.92
HERC4-205ENST00000412272 H3BNG1 76 aa3.04□□□□□ -1.92
HERC4-205ENST00000412272 NBDYA0A0U1RRE5 68 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms