RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 NPYP01303 97 aa3.51□□□□□ -1.85
LINC00396-201ENST00000411690 C10orf25Q5T742 122 aa3.51□□□□□ -1.85
LINC00396-201ENST00000411690 TIMM21Q9BVV7 248 aa3.51□□□□□ -1.85
LINC00396-201ENST00000411690 SMIM2Q9BVW6 85 aa3.51□□□□□ -1.85
LINC00396-201ENST00000411690 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
LINC00396-201ENST00000411690 IGLV8-61A0A075B6I0 122 aa3.5□□□□□ -1.85
LINC00396-201ENST00000411690 K7ERU9 68 aa3.5□□□□□ -1.85
LINC00396-201ENST00000411690 DPM2O94777 84 aa3.5□□□□□ -1.85
LINC00396-201ENST00000411690 PLNP26678 52 aa3.5□□□□□ -1.85
LINC00396-201ENST00000411690 RPL39P62891 51 aaKnown RBP3.5□□□□□ -1.85
LINC00396-201ENST00000411690 ORMDL2Q53FV1 153 aa3.5□□□□□ -1.85
LINC00396-201ENST00000411690 C9orf129Q5T035 196 aaKnown RBP3.5□□□□□ -1.85
LINC00396-201ENST00000411690 UNQ6190/PRO20217Q6UXQ8 127 aa3.5□□□□□ -1.85
LINC00396-201ENST00000411690 NRACQ8N912 160 aa3.5□□□□□ -1.85
LINC00396-201ENST00000411690 C6orf48Q9UBA6 75 aa3.5□□□□□ -1.85
LINC00396-201ENST00000411690 C22orf24Q9Y442 160 aa3.5□□□□□ -1.85
LINC00396-201ENST00000411690 LOC389332A0A1B0GUA5 103 aa3.49□□□□□ -1.85
LINC00396-201ENST00000411690 GAGE10A6NGK3 116 aa3.49□□□□□ -1.85
LINC00396-201ENST00000411690 IGKCP01834 107 aa3.49□□□□□ -1.85
LINC00396-201ENST00000411690 CFC1P0CG37 223 aa3.49□□□□□ -1.85
LINC00396-201ENST00000411690 CKS1BP61024 79 aa3.49□□□□□ -1.85
LINC00396-201ENST00000411690 PAPPA-AS1Q5QFB9 102 aa3.49□□□□□ -1.85
LINC00396-201ENST00000411690 COX6B2Q6YFQ2 88 aa3.49□□□□□ -1.85
LINC00396-201ENST00000411690 ERASQ7Z444 233 aa3.49□□□□□ -1.85
LINC00396-201ENST00000411690 TOMM7Q9P0U1 55 aa3.49□□□□□ -1.85
LINC00396-201ENST00000411690 F8VRH5 84 aa3.48□□□□□ -1.85
LINC00396-201ENST00000411690 K7EP34 96 aa3.48□□□□□ -1.85
LINC00396-201ENST00000411690 SMIM13P0DJ93 91 aa3.48□□□□□ -1.85
LINC00396-201ENST00000411690 MRPS36P82909 103 aaKnown RBP3.48□□□□□ -1.85
LINC00396-201ENST00000411690 OCIAD2Q56VL3 154 aa3.48□□□□□ -1.85
LINC00396-201ENST00000411690 PCOTHQ58A44 107 aa3.48□□□□□ -1.85
LINC00396-201ENST00000411690 C6orf226Q5I0X4 101 aa3.48□□□□□ -1.85
LINC00396-201ENST00000411690 C3orf22Q8N5N4 141 aa3.48□□□□□ -1.85
LINC00396-201ENST00000411690 TOMM6Q96B49 74 aa3.48□□□□□ -1.85
LINC00396-201ENST00000411690 TMEM141Q96I45 108 aa3.48□□□□□ -1.85
LINC00396-201ENST00000411690 VCX2Q9H322 139 aa3.48□□□□□ -1.85
LINC00396-201ENST00000411690 CST9LQ9H4G1 147 aa3.48□□□□□ -1.85
LINC00396-201ENST00000411690 GEMIN7Q9H840 131 aaKnown RBP3.48□□□□□ -1.85
LINC00396-201ENST00000411690 NDUFA12Q9UI09 145 aa3.48□□□□□ -1.85
LINC00396-201ENST00000411690 CYSLTR1Q9Y271 337 aa3.48□□□□□ -1.85
LINC00396-201ENST00000411690 CHTOPQ9Y3Y2 248 aaKnown RBP3.48□□□□□ -1.85
LINC00396-201ENST00000411690 A0A1W2PPM0 123 aa3.47□□□□□ -1.85
LINC00396-201ENST00000411690 NDUFC2-KCTD14E9PQ53 114 aa3.47□□□□□ -1.85
LINC00396-201ENST00000411690 H0Y8G0 127 aa3.47□□□□□ -1.85
LINC00396-201ENST00000411690 FABP2P12104 132 aa3.47□□□□□ -1.85
LINC00396-201ENST00000411690 UBE2AP49459 152 aa3.47□□□□□ -1.85
LINC00396-201ENST00000411690 KRTAP6-3Q3LI67 103 aa3.47□□□□□ -1.85
LINC00396-201ENST00000411690 TRBV30A0A0K0K1B3 111 aa3.46□□□□□ -1.86
LINC00396-201ENST00000411690 A0A1B0GWB2 263 aa3.46□□□□□ -1.86
LINC00396-201ENST00000411690 F8W1H4 67 aa3.46□□□□□ -1.86
LINC00396-201ENST00000411690 NMUP48645 174 aa3.46□□□□□ -1.86
LINC00396-201ENST00000411690 ZC2HC1BQ5TFG8 222 aa3.46□□□□□ -1.86
LINC00396-201ENST00000411690 MRPL55Q7Z7F7 128 aaKnown RBP3.46□□□□□ -1.86
LINC00396-201ENST00000411690 CEND1Q8N111 149 aa3.46□□□□□ -1.86
LINC00396-201ENST00000411690 IGLV4-3A0A075B6K6 122 aa3.45□□□□□ -1.86
LINC00396-201ENST00000411690 IGHV3OR16-9A0A0B4J2B5 98 aa3.45□□□□□ -1.86
LINC00396-201ENST00000411690 E9PLD3 99 aa3.45□□□□□ -1.86
LINC00396-201ENST00000411690 H3BUT2 72 aa3.45□□□□□ -1.86
LINC00396-201ENST00000411690 J3QR89 54 aa3.45□□□□□ -1.86
LINC00396-201ENST00000411690 HERVK_113P61574 105 aa3.45□□□□□ -1.86
LINC00396-201ENST00000411690 C2orf66Q6UXQ4 117 aa3.45□□□□□ -1.86
LINC00396-201ENST00000411690 Q6ZVH6 145 aa3.45□□□□□ -1.86
LINC00396-201ENST00000411690 KRTAP13-1Q8IUC0 172 aa3.45□□□□□ -1.86
LINC00396-201ENST00000411690 PCP2Q8IVA1 136 aa3.45□□□□□ -1.86
LINC00396-201ENST00000411690 SCGB3A1Q96QR1 104 aa3.45□□□□□ -1.86
LINC00396-201ENST00000411690 TIMM17AQ99595 171 aa3.45□□□□□ -1.86
LINC00396-201ENST00000411690 PYGO1Q9Y3Y4 419 aa3.45□□□□□ -1.86
LINC00396-201ENST00000411690 SPCS1Q9Y6A9 102 aa3.45□□□□□ -1.86
LINC00396-201ENST00000411690 MYMXA0A1B0GTQ4 84 aa3.44□□□□□ -1.86
LINC00396-201ENST00000411690 RPL37AP8A6NKH3 93 aa3.44□□□□□ -1.86
LINC00396-201ENST00000411690 SPINK1P00995 79 aa3.44□□□□□ -1.86
LINC00396-201ENST00000411690 HERVK_113P63121 156 aa3.44□□□□□ -1.86
LINC00396-201ENST00000411690 LYRM7Q5U5X0 104 aa3.44□□□□□ -1.86
LINC00396-201ENST00000411690 C2orf82Q6UX34 121 aa3.44□□□□□ -1.86
LINC00396-201ENST00000411690 LINC00846Q9NV44 126 aa3.44□□□□□ -1.86
LINC00396-201ENST00000411690 TP73-AS1Q9UF72 201 aa3.44□□□□□ -1.86
LINC00396-201ENST00000411690 SCGB1A1P11684 91 aa3.43□□□□□ -1.86
LINC00396-201ENST00000411690 CXCL5P42830 114 aa3.43□□□□□ -1.86
LINC00396-201ENST00000411690 FXYD2P54710 66 aa3.43□□□□□ -1.86
LINC00396-201ENST00000411690 PMVKQ15126 192 aa3.43□□□□□ -1.86
LINC00396-201ENST00000411690 LINC01561Q8N1V8 128 aa3.43□□□□□ -1.86
LINC00396-201ENST00000411690 NKAPP1Q8N9T2 125 aa3.43□□□□□ -1.86
LINC00396-201ENST00000411690 LINC00167Q96N53 147 aa3.43□□□□□ -1.86
LINC00396-201ENST00000411690 VPS25Q9BRG1 176 aa3.43□□□□□ -1.86
LINC00396-201ENST00000411690 XAGE1AQ9HD64 81 aa3.43□□□□□ -1.86
LINC00396-201ENST00000411690 SPANXB1Q9NS25 103 aaPredicted RBP3.43□□□□□ -1.86
LINC00396-201ENST00000411690 IGIPA6NJ69 53 aa3.42□□□□□ -1.86
LINC00396-201ENST00000411690 C11orf86A6NJI1 115 aa3.42□□□□□ -1.86
LINC00396-201ENST00000411690 KIAA0087Q14695 138 aa3.42□□□□□ -1.86
LINC00396-201ENST00000411690 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
LINC00396-201ENST00000411690 Q8IZM0 81 aa3.42□□□□□ -1.86
LINC00396-201ENST00000411690 Q8NBF4 154 aa3.42□□□□□ -1.86
LINC00396-201ENST00000411690 HIST1H4GQ99525 98 aa3.42□□□□□ -1.86
LINC00396-201ENST00000411690 TRBV20-1A0A075B6N2 111 aa3.41□□□□□ -1.86
LINC00396-201ENST00000411690 PRLHP81277 87 aa3.41□□□□□ -1.86
LINC00396-201ENST00000411690 COX7B2Q8TF08 81 aa3.41□□□□□ -1.86
LINC00396-201ENST00000411690 PLEKHB2Q96CS7 222 aa3.41□□□□□ -1.86
LINC00396-201ENST00000411690 NHP2Q9NX24 153 aaKnown RBP3.41□□□□□ -1.86
LINC00396-201ENST00000411690 ZNF815PA8K554 130 aa3.4□□□□□ -1.87
LINC00396-201ENST00000411690 TMEM238C9JI98 176 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms