RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 PRR15Q8IV56 129 aa12.07□□□□□ -0.48
HCG11-201ENST00000411553 ACANP16112 2415 aa12.07□□□□□ -0.48
HCG11-201ENST00000411553 C9orf129Q5T035 196 aaKnown RBP12.06□□□□□ -0.48
HCG11-201ENST00000411553 SRCAPQ6ZRS2 3230 aa12.06□□□□□ -0.48
HCG11-201ENST00000411553 A0A1B0GVX0 72 aa12.06□□□□□ -0.48
HCG11-201ENST00000411553 SMR3BP02814 79 aaPredicted RBP12.04□□□□□ -0.48
HCG11-201ENST00000411553 KRTAP10-3P60369 221 aa12.04□□□□□ -0.48
HCG11-201ENST00000411553 C9orf163Q8N9P6 203 aa12.04□□□□□ -0.48
HCG11-201ENST00000411553 UQCR11O14957 56 aa12.03□□□□□ -0.48
HCG11-201ENST00000411553 A0A096LNT2 108 aa12.03□□□□□ -0.48
HCG11-201ENST00000411553 GIG44P09565 113 aaPredicted RBP12.02□□□□□ -0.48
HCG11-201ENST00000411553 PCSK5Q92824 1860 aa12.02□□□□□ -0.48
HCG11-201ENST00000411553 TLX1NBP0CAT3 122 aa12.02□□□□□ -0.49
HCG11-201ENST00000411553 Q8N377 158 aa12.02□□□□□ -0.49
HCG11-201ENST00000411553 APLNQ9ULZ1 77 aa12.02□□□□□ -0.49
HCG11-201ENST00000411553 PLA2G2DQ9UNK4 145 aa12.01□□□□□ -0.49
HCG11-201ENST00000411553 LINC00612Q8N6U2 182 aa12□□□□□ -0.49
HCG11-201ENST00000411553 EIF4EBP3O60516 100 aaPredicted RBP11.99□□□□□ -0.49
HCG11-201ENST00000411553 CYP4F30PQ9H0H9 118 aa11.99□□□□□ -0.49
HCG11-201ENST00000411553 A8MUN3 132 aa11.98□□□□□ -0.49
HCG11-201ENST00000411553 IGLV7-43P04211 117 aa11.98□□□□□ -0.49
HCG11-201ENST00000411553 LINC00336Q6ZUF6 198 aa11.97□□□□□ -0.49
HCG11-201ENST00000411553 ANAPC11Q9NYG5 84 aa11.96□□□□□ -0.49
HCG11-201ENST00000411553 A0A0G2JQZ4 141 aa11.95□□□□□ -0.5
HCG11-201ENST00000411553 A0A1W2PNN7 141 aa11.95□□□□□ -0.5
HCG11-201ENST00000411553 IGLV5-37A0A075B6J1 123 aa11.94□□□□□ -0.5
HCG11-201ENST00000411553 CRIPTQ9P021 101 aa11.94□□□□□ -0.5
HCG11-201ENST00000411553 PSORS1C2Q9UIG4 136 aa11.93□□□□□ -0.5
HCG11-201ENST00000411553 EP400Q96L91 3159 aa11.93□□□□□ -0.5
HCG11-201ENST00000411553 RBM12B-AS1Q9P1G2 102 aa11.92□□□□□ -0.5
HCG11-201ENST00000411553 MIR22HGQ0VDD5 57 aa11.91□□□□□ -0.5
HCG11-201ENST00000411553 SPRR4Q96PI1 79 aa11.89□□□□□ -0.51
HCG11-201ENST00000411553 ZNF575Q86XF7 245 aa11.89□□□□□ -0.51
HCG11-201ENST00000411553 CENPFP49454 3210 aa11.89□□□□□ -0.51
HCG11-201ENST00000411553 CNBPP62633 177 aaKnown RBP11.88□□□□□ -0.51
HCG11-201ENST00000411553 CASC10Q5T4H9 136 aa11.87□□□□□ -0.51
HCG11-201ENST00000411553 KLKP1Q107X0 134 aa11.85□□□□□ -0.51
HCG11-201ENST00000411553 A0A1W2PNM2 257 aa11.77□□□□□ -0.52
HCG11-201ENST00000411553 LINC01554Q52M75 96 aa11.77□□□□□ -0.52
HCG11-201ENST00000411553 KRTAP1-3Q8IUG1 177 aa11.77□□□□□ -0.52
HCG11-201ENST00000411553 FAM104AQ969W3 186 aa11.75□□□□□ -0.53
HCG11-201ENST00000411553 IGLV5-48A0A075B6I7 105 aa11.74□□□□□ -0.53
HCG11-201ENST00000411553 EPG5Q9HCE0 2579 aa11.74□□□□□ -0.53
HCG11-201ENST00000411553 Q8N1X5 172 aa11.74□□□□□ -0.53
HCG11-201ENST00000411553 KRTAP1-1Q07627 177 aa11.72□□□□□ -0.53
HCG11-201ENST00000411553 A0A0D9SG42 100 aa11.71□□□□□ -0.54
HCG11-201ENST00000411553 H7BZZ5 65 aa11.71□□□□□ -0.54
HCG11-201ENST00000411553 SPANXA2-OT1Q8N9U9 137 aa11.67□□□□□ -0.54
HCG11-201ENST00000411553 CDC42SE1Q9NRR8 79 aa11.67□□□□□ -0.54
HCG11-201ENST00000411553 TNP2Q05952 138 aa11.67□□□□□ -0.54
HCG11-201ENST00000411553 Q6ZSA8 131 aa11.65□□□□□ -0.54
HCG11-201ENST00000411553 MGAM2Q2M2H8 2515 aa11.63□□□□□ -0.55
HCG11-201ENST00000411553 CD164Q04900 197 aa11.63□□□□□ -0.55
HCG11-201ENST00000411553 USP24Q9UPU5 2620 aa11.63□□□□□ -0.55
HCG11-201ENST00000411553 FLNBO75369 2602 aaKnown RBP11.62□□□□□ -0.55
HCG11-201ENST00000411553 HECTD1Q9ULT8 2610 aa11.6□□□□□ -0.55
HCG11-201ENST00000411553 IGLV7-46A0A075B6I9 117 aa11.59□□□□□ -0.55
HCG11-201ENST00000411553 PRR26Q8N8Z3 221 aa11.55□□□□□ -0.56
HCG11-201ENST00000411553 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.54□□□□□ -0.56
HCG11-201ENST00000411553 KTN1-AS1Q86SY8 53 aa11.51□□□□□ -0.57
HCG11-201ENST00000411553 LCA10Q71F78 164 aa11.48□□□□□ -0.57
HCG11-201ENST00000411553 M0R2T5 61 aa11.47□□□□□ -0.57
HCG11-201ENST00000411553 FAM229BQ4G0N7 80 aa11.47□□□□□ -0.57
HCG11-201ENST00000411553 CAMK2N1Q7Z7J9 78 aa11.46□□□□□ -0.58
HCG11-201ENST00000411553 OCR1Q9BZK8 76 aa11.45□□□□□ -0.58
HCG11-201ENST00000411553 HRES1P13985 223 aa11.41□□□□□ -0.58
HCG11-201ENST00000411553 PLAC8Q9NZF1 115 aa11.4□□□□□ -0.58
HCG11-201ENST00000411553 LUZP6Q538Z0 58 aa11.4□□□□□ -0.59
HCG11-201ENST00000411553 A0A1B0GU33 70 aa11.39□□□□□ -0.59
HCG11-201ENST00000411553 CR1P17927 2039 aa11.39□□□□□ -0.59
HCG11-201ENST00000411553 WIPF1O43516 503 aa11.39□□□□□ -0.59
HCG11-201ENST00000411553 Q1T7F1 81 aa11.38□□□□□ -0.59
HCG11-201ENST00000411553 ZCCHC13Q8WW36 166 aaKnown RBP11.35□□□□□ -0.59
HCG11-201ENST00000411553 CSAG1Q6PB30 78 aa11.31□□□□□ -0.6
HCG11-201ENST00000411553 LINC00483Q53H64 154 aa11.31□□□□□ -0.6
HCG11-201ENST00000411553 MMP24-AS1A0A0U1RRL7 71 aa11.3□□□□□ -0.6
HCG11-201ENST00000411553 BPTFQ12830 3046 aa11.29□□□□□ -0.6
HCG11-201ENST00000411553 ATRQ13535 2644 aa11.29□□□□□ -0.6
HCG11-201ENST00000411553 S4R3F8 94 aa11.28□□□□□ -0.6
HCG11-201ENST00000411553 FLNAP21333 2647 aaKnown RBP11.28□□□□□ -0.6
HCG11-201ENST00000411553 SPRR1AP35321 89 aa11.26□□□□□ -0.61
HCG11-201ENST00000411553 MAST4O15021 2626 aa11.26□□□□□ -0.61
HCG11-201ENST00000411553 Q8N9P0 234 aaPredicted RBP11.24□□□□□ -0.61
HCG11-201ENST00000411553 PRRC2CQ9Y520 2896 aaKnown RBP11.21□□□□□ -0.61
HCG11-201ENST00000411553 ITPR3Q14573 2671 aa11.21□□□□□ -0.61
HCG11-201ENST00000411553 Q75L30 129 aa11.2□□□□□ -0.62
HCG11-201ENST00000411553 DMAC1Q96GE9 116 aa11.2□□□□□ -0.62
HCG11-201ENST00000411553 Q8NDZ9 215 aa11.19□□□□□ -0.62
HCG11-201ENST00000411553 SPRR1BP22528 89 aa11.18□□□□□ -0.62
HCG11-201ENST00000411553 Q5W150 140 aa11.17□□□□□ -0.62
HCG11-201ENST00000411553 HELZ2Q9BYK8 2649 aaKnown RBP11.16□□□□□ -0.62
HCG11-201ENST00000411553 SEC61BP60468 96 aaKnown RBP11.16□□□□□ -0.62
HCG11-201ENST00000411553 LINC01558Q9Y6Z2 57 aa11.16□□□□□ -0.62
HCG11-201ENST00000411553 SPINK7P58062 85 aa11.15□□□□□ -0.62
HCG11-201ENST00000411553 Q5VSD8 79 aa11.14□□□□□ -0.63
HCG11-201ENST00000411553 LINC00472Q9H8W2 130 aa11.13□□□□□ -0.63
HCG11-201ENST00000411553 R4GN34 69 aa11.11□□□□□ -0.63
HCG11-201ENST00000411553 KRTAP1-5Q9BYS1 174 aa11.1□□□□□ -0.63
HCG11-201ENST00000411553 LCE6AA0A183 80 aa11.06□□□□□ -0.64
HCG11-201ENST00000411553 GOLGB1Q14789 3259 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms