RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 FCGBPQ9Y6R7 5405 aaPredicted RBP1.14□□□□□ -2.23
RNU6-1140P-201ENST00000410517 TGIF2-C20orf24A0A0A6YYL0 155 aa1.13□□□□□ -2.23
RNU6-1140P-201ENST00000410517 BORCS7-ASMTA0A0B4J1R7 106 aa1.13□□□□□ -2.23
RNU6-1140P-201ENST00000410517 LINC00959A0A1B0GUT2 108 aa1.13□□□□□ -2.23
RNU6-1140P-201ENST00000410517 C7orf77A4D0Y5 90 aa1.13□□□□□ -2.23
RNU6-1140P-201ENST00000410517 PFDN1O60925 122 aa1.13□□□□□ -2.23
RNU6-1140P-201ENST00000410517 SRP19P09132 144 aaKnown RBP1.13□□□□□ -2.23
RNU6-1140P-201ENST00000410517 GCHFRP30047 84 aa1.13□□□□□ -2.23
RNU6-1140P-201ENST00000410517 RAB5BP61020 215 aa1.13□□□□□ -2.23
RNU6-1140P-201ENST00000410517 LSM3P62310 102 aaKnown RBP1.13□□□□□ -2.23
RNU6-1140P-201ENST00000410517 CLPSL2Q6UWE3 100 aa1.13□□□□□ -2.23
RNU6-1140P-201ENST00000410517 COX6B2Q6YFQ2 88 aa1.13□□□□□ -2.23
RNU6-1140P-201ENST00000410517 LINC00299Q6ZSB3 139 aa1.13□□□□□ -2.23
RNU6-1140P-201ENST00000410517 C2orf91Q6ZV80 131 aa1.13□□□□□ -2.23
RNU6-1140P-201ENST00000410517 Q86TA4 180 aa1.13□□□□□ -2.23
RNU6-1140P-201ENST00000410517 KRTAP13-1Q8IUC0 172 aa1.13□□□□□ -2.23
RNU6-1140P-201ENST00000410517 BORCS7Q96B45 105 aa1.13□□□□□ -2.23
RNU6-1140P-201ENST00000410517 TIMM21Q9BVV7 248 aa1.13□□□□□ -2.23
RNU6-1140P-201ENST00000410517 CDC42SE2Q9NRR3 84 aa1.13□□□□□ -2.23
RNU6-1140P-201ENST00000410517 TRBV6-5A0A0K0K1A5 114 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 TRBV27A0A0K0K1C4 114 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 CTXND1A0A1B0GTU2 59 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 FAM24AA6NFZ4 105 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 LINC01549A6NIU2 74 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 UMAD1C9J7I0 102 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 ARL14EPLP0DKL9 152 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 FCER1GP30273 86 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 AKR1C3P42330 323 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 RAB5CP51148 216 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 ZNF80P51504 273 aaPredicted RBP1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 NKX2-5P52952 324 aaPredicted RBP1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 CKS1BP61024 79 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 SPAG11BQ08648 103 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 PHF5AQ7RTV0 110 aaKnown RBP1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 SSBP3-AS1Q7Z2R9 100 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 C9orf62Q8N4C0 152 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 RETNLBQ9BQ08 111 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 LIMD2Q9BT23 127 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 CNFNQ9BYD5 112 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 CST9LQ9H4G1 147 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 ST20Q9HBF5 79 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 SPANXA1Q9NS26 97 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 TMEM242Q9NWH2 141 aa1.12□□□□□ -2.23
RNU6-1140P-201ENST00000410517 IGKV3OR2-268A0A0C4DH90 116 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 HMSDA8MTL9 139 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 ZNF727A8MUV8 499 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 H7C2G1 150 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 K7EMI3 77 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 PDE6DO43924 150 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 SIX6O95475 246 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 MGPP08493 103 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 BCL2P10415 239 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 KRTAP12-3P60328 96 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 HBBP68871 147 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 MRPS36P82909 103 aaKnown RBP1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 AKR1C8PQ5T2L2 129 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 KTN1-AS1Q86SY8 53 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 BAGE2Q86Y30 109 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 OR10AG1Q8NH19 301 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 C2orf88Q9BSF0 95 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 PRO2289Q9P1D8 64 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 HSPB11Q9Y547 144 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 NEBP20929 6669 aa1.11□□□□□ -2.23
RNU6-1140P-201ENST00000410517 FLGP20930 4061 aaPredicted RBP1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 IGKV2-29A2NJV5 120 aaPredicted RBP1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 LINC00587B1AMM8 73 aa1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 F8VRH5 84 aa1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 LYRM1O43325 122 aa1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 MPC2O95563 127 aa1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 S100A8P05109 93 aa1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 IGLC6P0CF74 106 aa1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 IFI27P40305 119 aaPredicted RBP1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 GNG4P50150 75 aa1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 CRIP1P50238 77 aa1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 FXYD2P54710 66 aa1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 RAB14P61106 215 aa1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 GNG5P63218 68 aa1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 PMAIP1Q13794 54 aa1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 COX17Q14061 63 aa1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 Q8IZM0 81 aa1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 PPP1R1CQ8WVI7 109 aa1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 C20orf78Q9BR46 151 aa1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 NAA38Q9BRA0 125 aaKnown RBP1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 MANBALQ9NQG1 85 aa1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 C22orf24Q9Y442 160 aa1.1□□□□□ -2.23
RNU6-1140P-201ENST00000410517 TRBV20-1A0A075B6N2 111 aa1.09□□□□□ -2.23
RNU6-1140P-201ENST00000410517 TRAV7A0A075B6U4 112 aa1.09□□□□□ -2.23
RNU6-1140P-201ENST00000410517 TMSB15BA0A087X1C1 80 aa1.09□□□□□ -2.23
RNU6-1140P-201ENST00000410517 TRAV13-1A0A0B4J241 112 aa1.09□□□□□ -2.23
RNU6-1140P-201ENST00000410517 PLA2G10O15496 165 aa1.09□□□□□ -2.23
RNU6-1140P-201ENST00000410517 PPBPP02775 128 aa1.09□□□□□ -2.23
RNU6-1140P-201ENST00000410517 FOXA3P55318 350 aaPredicted RBP1.09□□□□□ -2.23
RNU6-1140P-201ENST00000410517 DEFA1P59665 94 aa1.09□□□□□ -2.23
RNU6-1140P-201ENST00000410517 DEFA3P59666 94 aa1.09□□□□□ -2.23
RNU6-1140P-201ENST00000410517 CCL20P78556 96 aa1.09□□□□□ -2.23
RNU6-1140P-201ENST00000410517 MT1HP80294 61 aa1.09□□□□□ -2.23
RNU6-1140P-201ENST00000410517 Q5BKY6 102 aa1.09□□□□□ -2.23
RNU6-1140P-201ENST00000410517 MBD3L1Q8WWY6 194 aa1.09□□□□□ -2.23
RNU6-1140P-201ENST00000410517 TMEM191AQ9H0A3 160 aa1.09□□□□□ -2.23
RNU6-1140P-201ENST00000410517 NAT8Q9UHE5 227 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms