RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 ETDCA0A1B0GVM5 59 aa12.62□□□□□ -0.39
C4orf48-202ENST00000409860 RPL28P46779 137 aaKnown RBP12.62□□□□□ -0.39
C4orf48-202ENST00000409860 FXYD2P54710 66 aa12.62□□□□□ -0.39
C4orf48-202ENST00000409860 ZNF73O43830 326 aaPredicted RBP12.61□□□□□ -0.39
C4orf48-202ENST00000409860 ZNF861PO60384 105 aa12.61□□□□□ -0.39
C4orf48-202ENST00000409860 RAB37Q96AX2 223 aa12.61□□□□□ -0.39
C4orf48-202ENST00000409860 A0A0B4J2C4 111 aa12.6□□□□□ -0.39
C4orf48-202ENST00000409860 SPINK6Q6UWN8 80 aa12.6□□□□□ -0.39
C4orf48-202ENST00000409860 CFC1BP0CG36 223 aa12.59□□□□□ -0.39
C4orf48-202ENST00000409860 CFC1P0CG37 223 aa12.59□□□□□ -0.39
C4orf48-202ENST00000409860 RPL13AP40429 203 aaKnown RBP12.59□□□□□ -0.39
C4orf48-202ENST00000409860 PRLHP81277 87 aa12.59□□□□□ -0.39
C4orf48-202ENST00000409860 DIRC1Q969H9 104 aa12.59□□□□□ -0.39
C4orf48-202ENST00000409860 INAFM2P0DMQ5 153 aa12.58□□□□□ -0.4
C4orf48-202ENST00000409860 HINT1P49773 126 aaPredicted RBP12.58□□□□□ -0.4
C4orf48-202ENST00000409860 CTAG1AP78358 180 aa12.58□□□□□ -0.4
C4orf48-202ENST00000409860 KRTAP4-16G5E9R7 235 aaPredicted RBP12.57□□□□□ -0.4
C4orf48-202ENST00000409860 KRTAP13-1Q8IUC0 172 aa12.57□□□□□ -0.4
C4orf48-202ENST00000409860 H0Y9J4 135 aa12.56□□□□□ -0.4
C4orf48-202ENST00000409860 M0R143 59 aa12.55□□□□□ -0.4
C4orf48-202ENST00000409860 C6orf99Q4VX62 202 aa12.55□□□□□ -0.4
C4orf48-202ENST00000409860 NHP2Q9NX24 153 aaKnown RBP12.55□□□□□ -0.4
C4orf48-202ENST00000409860 SRRM2Q9UQ35 2752 aaKnown RBP12.54□□□□□ -0.4
C4orf48-202ENST00000409860 B5MCH6 92 aa12.54□□□□□ -0.4
C4orf48-202ENST00000409860 BVES-AS1Q5T3Y7 98 aa12.54□□□□□ -0.4
C4orf48-202ENST00000409860 SMIM11BQ8TCY0 68 aa12.54□□□□□ -0.4
C4orf48-202ENST00000409860 Q6ZRX8 168 aa12.53□□□□□ -0.4
C4orf48-202ENST00000409860 HIGD2AQ9BW72 106 aa12.52□□□□□ -0.41
C4orf48-202ENST00000409860 PRO1854Q9UHT4 67 aa12.52□□□□□ -0.41
C4orf48-202ENST00000409860 H7C2G1 150 aa12.51□□□□□ -0.41
C4orf48-202ENST00000409860 TRBV7-6A0A0J9YX20 115 aa12.5□□□□□ -0.41
C4orf48-202ENST00000409860 COX7BP24311 80 aa12.5□□□□□ -0.41
C4orf48-202ENST00000409860 A0A1B0GWB2 263 aa12.49□□□□□ -0.41
C4orf48-202ENST00000409860 Q1RN00 199 aa12.49□□□□□ -0.41
C4orf48-202ENST00000409860 ABCA13Q86UQ4 5058 aa12.49□□□□□ -0.41
C4orf48-202ENST00000409860 PKHD1L1Q86WI1 4243 aa12.48□□□□□ -0.41
C4orf48-202ENST00000409860 K7ERJ3 54 aa12.48□□□□□ -0.41
C4orf48-202ENST00000409860 ELOF1P60002 83 aaKnown RBP12.48□□□□□ -0.41
C4orf48-202ENST00000409860 VAMP3Q15836 100 aa12.47□□□□□ -0.41
C4orf48-202ENST00000409860 SMCR5Q8TEV8 140 aa12.46□□□□□ -0.41
C4orf48-202ENST00000409860 Q9BRP9 147 aa12.45□□□□□ -0.42
C4orf48-202ENST00000409860 DHRS4-AS1Q9P1J3 65 aa12.45□□□□□ -0.42
C4orf48-202ENST00000409860 ZNF706Q9Y5V0 76 aaPredicted RBP12.42□□□□□ -0.42
C4orf48-202ENST00000409860 FLG2Q5D862 2391 aaPredicted RBP12.42□□□□□ -0.42
C4orf48-202ENST00000409860 BATFQ16520 125 aa12.4□□□□□ -0.42
C4orf48-202ENST00000409860 ERC2-IT1O76042 136 aa12.39□□□□□ -0.43
C4orf48-202ENST00000409860 SLC25A20O43772 301 aa12.38□□□□□ -0.43
C4orf48-202ENST00000409860 TSPAN13O95857 204 aa12.38□□□□□ -0.43
C4orf48-202ENST00000409860 PSMB2P49721 201 aa12.37□□□□□ -0.43
C4orf48-202ENST00000409860 OXTP01178 125 aa12.36□□□□□ -0.43
C4orf48-202ENST00000409860 KRTAP1-4P0C5Y4 121 aa12.36□□□□□ -0.43
C4orf48-202ENST00000409860 SPRR4Q96PI1 79 aa12.36□□□□□ -0.43
C4orf48-202ENST00000409860 H0YGX0 51 aa12.35□□□□□ -0.43
C4orf48-202ENST00000409860 TRIAP1O43715 76 aa12.35□□□□□ -0.43
C4orf48-202ENST00000409860 LINC00575Q6W349 94 aa12.35□□□□□ -0.43
C4orf48-202ENST00000409860 COX6CP09669 75 aa12.33□□□□□ -0.44
C4orf48-202ENST00000409860 LINC01600Q96MT4 127 aa12.33□□□□□ -0.44
C4orf48-202ENST00000409860 PCP4L1A6NKN8 68 aa12.32□□□□□ -0.44
C4orf48-202ENST00000409860 KRTAP29-1A8MX34 341 aaPredicted RBP12.32□□□□□ -0.44
C4orf48-202ENST00000409860 GAGE2AQ6NT46 116 aa12.32□□□□□ -0.44
C4orf48-202ENST00000409860 hADV29S1A0JD25 119 aa12.31□□□□□ -0.44
C4orf48-202ENST00000409860 SNCGO76070 127 aa12.31□□□□□ -0.44
C4orf48-202ENST00000409860 FAM229BQ4G0N7 80 aa12.31□□□□□ -0.44
C4orf48-202ENST00000409860 ST20-AS1Q8NBB2 130 aa12.31□□□□□ -0.44
C4orf48-202ENST00000409860 ANAPC11Q9NYG5 84 aa12.3□□□□□ -0.44
C4orf48-202ENST00000409860 PCLOQ9Y6V0 5065 aa12.29□□□□□ -0.44
C4orf48-202ENST00000409860 MYCBP2O75592 4640 aa12.29□□□□□ -0.44
C4orf48-202ENST00000409860 FAT3Q8TDW7 4589 aa12.28□□□□□ -0.44
C4orf48-202ENST00000409860 CRYGAP11844 174 aa12.28□□□□□ -0.44
C4orf48-202ENST00000409860 LINC00483Q53H64 154 aa12.28□□□□□ -0.44
C4orf48-202ENST00000409860 SCGB1C2P0DMR2 95 aa12.27□□□□□ -0.45
C4orf48-202ENST00000409860 PRR26Q8N8Z3 221 aa12.27□□□□□ -0.45
C4orf48-202ENST00000409860 FAM218AQ96MZ4 157 aa12.26□□□□□ -0.45
C4orf48-202ENST00000409860 SNHG12Q9BXW3 62 aa12.26□□□□□ -0.45
C4orf48-202ENST00000409860 LRP1Q07954 4544 aaKnown RBP12.26□□□□□ -0.45
C4orf48-202ENST00000409860 A0A1B0GX51 115 aa12.25□□□□□ -0.45
C4orf48-202ENST00000409860 J3QL48 77 aa12.25□□□□□ -0.45
C4orf48-202ENST00000409860 DEFB105AQ8NG35 78 aa12.25□□□□□ -0.45
C4orf48-202ENST00000409860 A0A087X002 238 aa12.24□□□□□ -0.45
C4orf48-202ENST00000409860 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.24□□□□□ -0.45
C4orf48-202ENST00000409860 Q6ZQY7 126 aa12.24□□□□□ -0.45
C4orf48-202ENST00000409860 CLEC2BQ92478 149 aa12.24□□□□□ -0.45
C4orf48-202ENST00000409860 TEX49A0A1B0GTD5 131 aa12.23□□□□□ -0.45
C4orf48-202ENST00000409860 SPRR1BP22528 89 aa12.23□□□□□ -0.45
C4orf48-202ENST00000409860 IGLV5-48A0A075B6I7 105 aa12.22□□□□□ -0.45
C4orf48-202ENST00000409860 NAA38Q9BRA0 125 aaKnown RBP12.22□□□□□ -0.45
C4orf48-202ENST00000409860 MT1HL1P0DM35 61 aa12.2□□□□□ -0.46
C4orf48-202ENST00000409860 KRTAP10-8P60410 259 aa12.2□□□□□ -0.46
C4orf48-202ENST00000409860 TAX1BP3O14907 124 aa12.19□□□□□ -0.46
C4orf48-202ENST00000409860 LINC01547P58512 204 aaPredicted RBP12.19□□□□□ -0.46
C4orf48-202ENST00000409860 COL5A1-AS1Q5SY13 56 aa12.19□□□□□ -0.46
C4orf48-202ENST00000409860 LYRM7Q5U5X0 104 aa12.19□□□□□ -0.46
C4orf48-202ENST00000409860 TYMSOSQ8TAI1 123 aa12.19□□□□□ -0.46
C4orf48-202ENST00000409860 C9orf118A6NHY6 69 aa12.18□□□□□ -0.46
C4orf48-202ENST00000409860 H3BUT2 72 aa12.18□□□□□ -0.46
C4orf48-202ENST00000409860 DNAL4O96015 105 aa12.18□□□□□ -0.46
C4orf48-202ENST00000409860 KRTAP13-2Q52LG2 175 aa12.18□□□□□ -0.46
C4orf48-202ENST00000409860 OCIAD2Q56VL3 154 aa12.18□□□□□ -0.46
C4orf48-202ENST00000409860 LAMTOR3Q9UHA4 124 aa12.18□□□□□ -0.46
C4orf48-202ENST00000409860 C3orf22Q8N5N4 141 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 279.5 ms