RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 A0A087WTM6 91 aa2.51□□□□□ -2.01
CLK1-203ENST00000409769 TRBV30A0A0K0K1B3 111 aa2.51□□□□□ -2.01
CLK1-203ENST00000409769 LECT2O14960 151 aa2.51□□□□□ -2.01
CLK1-203ENST00000409769 PSCAO43653 123 aa2.51□□□□□ -2.01
CLK1-203ENST00000409769 C6orf226Q5I0X4 101 aa2.51□□□□□ -2.01
CLK1-203ENST00000409769 SLC25A34Q6PIV7 304 aa2.51□□□□□ -2.01
CLK1-203ENST00000409769 SFTA2Q6UW10 78 aa2.51□□□□□ -2.01
CLK1-203ENST00000409769 C2orf82Q6UX34 121 aa2.51□□□□□ -2.01
CLK1-203ENST00000409769 Q6ZRU5 148 aa2.51□□□□□ -2.01
CLK1-203ENST00000409769 LINC00526Q96FQ7 95 aa2.51□□□□□ -2.01
CLK1-203ENST00000409769 MIEN1Q9BRT3 115 aa2.51□□□□□ -2.01
CLK1-203ENST00000409769 PRO1933Q9H354 126 aa2.51□□□□□ -2.01
CLK1-203ENST00000409769 HIGD1BQ9P298 99 aa2.51□□□□□ -2.01
CLK1-203ENST00000409769 C6orf48Q9UBA6 75 aa2.51□□□□□ -2.01
CLK1-203ENST00000409769 LRP1BQ9NZR2 4599 aa2.51□□□□□ -2.01
CLK1-203ENST00000409769 TSTD3H0UI37 97 aa2.5□□□□□ -2.01
CLK1-203ENST00000409769 TIMM17BO60830 172 aa2.5□□□□□ -2.01
CLK1-203ENST00000409769 TLX1NBP0CAT3 122 aa2.5□□□□□ -2.01
CLK1-203ENST00000409769 CHTF8P0CG12 524 aa2.5□□□□□ -2.01
CLK1-203ENST00000409769 CKS1BP61024 79 aa2.5□□□□□ -2.01
CLK1-203ENST00000409769 CNBPP62633 177 aaKnown RBP2.5□□□□□ -2.01
CLK1-203ENST00000409769 COX17Q14061 63 aa2.5□□□□□ -2.01
CLK1-203ENST00000409769 UNQ6190/PRO20217Q6UXQ8 127 aa2.5□□□□□ -2.01
CLK1-203ENST00000409769 Q8N814 137 aa2.5□□□□□ -2.01
CLK1-203ENST00000409769 CAMK2N2Q96S95 79 aa2.5□□□□□ -2.01
CLK1-203ENST00000409769 SPANXB1Q9NS25 103 aaPredicted RBP2.5□□□□□ -2.01
CLK1-203ENST00000409769 ERG28Q9UKR5 140 aa2.5□□□□□ -2.01
CLK1-203ENST00000409769 PKD1P98161 4303 aa2.49□□□□□ -2.01
CLK1-203ENST00000409769 LOC107984156A0A0G2JMH3 177 aa2.49□□□□□ -2.01
CLK1-203ENST00000409769 SPRR5A0A1B0GTR4 108 aa2.49□□□□□ -2.01
CLK1-203ENST00000409769 LINC00587B1AMM8 73 aa2.49□□□□□ -2.01
CLK1-203ENST00000409769 DDTP30046 118 aa2.49□□□□□ -2.01
CLK1-203ENST00000409769 SYCNQ0VAF6 134 aa2.49□□□□□ -2.01
CLK1-203ENST00000409769 TAL2Q16559 108 aa2.49□□□□□ -2.01
CLK1-203ENST00000409769 C9orf116Q5BN46 136 aaPredicted RBP2.49□□□□□ -2.01
CLK1-203ENST00000409769 MEIG1Q5JSS6 88 aa2.49□□□□□ -2.01
CLK1-203ENST00000409769 SCGB1D4Q6XE38 83 aa2.49□□□□□ -2.01
CLK1-203ENST00000409769 ARL17AQ8IVW1 177 aa2.49□□□□□ -2.01
CLK1-203ENST00000409769 CARD19Q96LW7 228 aa2.49□□□□□ -2.01
CLK1-203ENST00000409769 SPANXDQ9BXN6 97 aa2.49□□□□□ -2.01
CLK1-203ENST00000409769 SPANXCQ9NY87 97 aa2.49□□□□□ -2.01
CLK1-203ENST00000409769 TMEM238C9JI98 176 aa2.48□□□□□ -2.01
CLK1-203ENST00000409769 NDUFC2-KCTD14E9PQ53 114 aa2.48□□□□□ -2.01
CLK1-203ENST00000409769 SMIM13P0DJ93 91 aa2.48□□□□□ -2.01
CLK1-203ENST00000409769 HSD52Q0P140 79 aa2.48□□□□□ -2.01
CLK1-203ENST00000409769 SOSTDC1Q6X4U4 206 aa2.48□□□□□ -2.01
CLK1-203ENST00000409769 LINC00336Q6ZUF6 198 aa2.48□□□□□ -2.01
CLK1-203ENST00000409769 MIR7-3HGQ8N6C7 128 aa2.48□□□□□ -2.01
CLK1-203ENST00000409769 DAND5Q8N907 189 aa2.48□□□□□ -2.01
CLK1-203ENST00000409769 C9orf163Q8N9P6 203 aa2.48□□□□□ -2.01
CLK1-203ENST00000409769 APOBP04114 4563 aaKnown RBP2.47□□□□□ -2.01
CLK1-203ENST00000409769 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.47□□□□□ -2.01
CLK1-203ENST00000409769 IFITM1P13164 125 aa2.47□□□□□ -2.01
CLK1-203ENST00000409769 PFN2P35080 140 aa2.47□□□□□ -2.01
CLK1-203ENST00000409769 FXYD2P54710 66 aa2.47□□□□□ -2.01
CLK1-203ENST00000409769 LINC00158P58513 81 aa2.47□□□□□ -2.01
CLK1-203ENST00000409769 CIRBPQ14011 172 aaKnown RBP2.47□□□□□ -2.01
CLK1-203ENST00000409769 BVES-AS1Q5T3Y7 98 aa2.47□□□□□ -2.01
CLK1-203ENST00000409769 SDIM1Q6ZPB5 146 aa2.47□□□□□ -2.01
CLK1-203ENST00000409769 MUSTN1Q8IVN3 82 aa2.47□□□□□ -2.01
CLK1-203ENST00000409769 Q8NDZ9 215 aa2.47□□□□□ -2.01
CLK1-203ENST00000409769 LINC00308Q8TCZ7 52 aa2.47□□□□□ -2.01
CLK1-203ENST00000409769 SND1-IT1Q9HBX3 110 aa2.47□□□□□ -2.01
CLK1-203ENST00000409769 A0A096LNI7 61 aa2.46□□□□□ -2.02
CLK1-203ENST00000409769 LOC107984640A0A0U1RRK4 108 aa2.46□□□□□ -2.02
CLK1-203ENST00000409769 C16orf90A8MZG2 172 aa2.46□□□□□ -2.02
CLK1-203ENST00000409769 FUSP35637 526 aaKnown RBP eCLIP2.46□□□□□ -2.02
CLK1-203ENST00000409769 KRTAP10-10P60014 251 aa2.46□□□□□ -2.02
CLK1-203ENST00000409769 CTAG1AP78358 180 aa2.46□□□□□ -2.02
CLK1-203ENST00000409769 KRTAP5-7Q6L8G8 165 aa2.46□□□□□ -2.02
CLK1-203ENST00000409769 CAMK2N1Q7Z7J9 78 aa2.46□□□□□ -2.02
CLK1-203ENST00000409769 PKHD1P08F94 4074 aa2.46□□□□□ -2.02
CLK1-203ENST00000409769 IGKV2-28A0A075B6P5 120 aa2.45□□□□□ -2.02
CLK1-203ENST00000409769 PCP4L1A6NKN8 68 aa2.45□□□□□ -2.02
CLK1-203ENST00000409769 M0R143 59 aa2.45□□□□□ -2.02
CLK1-203ENST00000409769 NDUFC2O95298 119 aa2.45□□□□□ -2.02
CLK1-203ENST00000409769 IGKV2D-28P01615 120 aa2.45□□□□□ -2.02
CLK1-203ENST00000409769 NPC2P61916 151 aa2.45□□□□□ -2.02
CLK1-203ENST00000409769 RPL18AQ02543 176 aaKnown RBP2.45□□□□□ -2.02
CLK1-203ENST00000409769 Q6ZSA8 131 aa2.45□□□□□ -2.02
CLK1-203ENST00000409769 SPACA4Q8TDM5 124 aa2.45□□□□□ -2.02
CLK1-203ENST00000409769 COPS9Q8WXC6 57 aa2.45□□□□□ -2.02
CLK1-203ENST00000409769 SNHG12Q9BXW3 62 aa2.45□□□□□ -2.02
CLK1-203ENST00000409769 XAGE1AQ9HD64 81 aa2.45□□□□□ -2.02
CLK1-203ENST00000409769 PKIGQ9Y2B9 76 aa2.45□□□□□ -2.02
CLK1-203ENST00000409769 RYR1P21817 5038 aa2.44□□□□□ -2.02
CLK1-203ENST00000409769 A0A0B4J2C4 111 aa2.44□□□□□ -2.02
CLK1-203ENST00000409769 TRBV10-2A0A0K0K1G8 114 aa2.44□□□□□ -2.02
CLK1-203ENST00000409769 A0A1W2PNN7 141 aa2.44□□□□□ -2.02
CLK1-203ENST00000409769 HINT1P49773 126 aaPredicted RBP2.44□□□□□ -2.02
CLK1-203ENST00000409769 LINC00474Q9P2X8 69 aa2.44□□□□□ -2.02
CLK1-203ENST00000409769 EPPK1P58107 5090 aaKnown RBP2.44□□□□□ -2.02
CLK1-203ENST00000409769 IGKV2-24A0A0C4DH68 120 aa2.43□□□□□ -2.02
CLK1-203ENST00000409769 K7ERJ3 54 aa2.43□□□□□ -2.02
CLK1-203ENST00000409769 IGLV6-57P01721 117 aa2.43□□□□□ -2.02
CLK1-203ENST00000409769 PRR3P79522 188 aaKnown RBP2.43□□□□□ -2.02
CLK1-203ENST00000409769 LINC00337Q8N6G1 96 aa2.43□□□□□ -2.02
CLK1-203ENST00000409769 NHP2Q9NX24 153 aaKnown RBP2.43□□□□□ -2.02
CLK1-203ENST00000409769 PLAC8Q9NZF1 115 aa2.43□□□□□ -2.02
CLK1-203ENST00000409769 BIRC6Q9NR09 4857 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms