RNA–Protein interactions for RNA: ENST00000409681.1

POLR1A-203, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5 BASIC

Gene POLR1A, Length 6,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-203ENST00000409681 LITAFQ99732 161 aa6.56□□□□□ -1.36
POLR1A-203ENST00000409681 LINC00304Q8N9R0 145 aa6.56□□□□□ -1.36
POLR1A-203ENST00000409681 TRIOO75962 3097 aa6.56□□□□□ -1.36
POLR1A-203ENST00000409681 SPTSSBQ8NFR3 76 aa6.55□□□□□ -1.36
POLR1A-203ENST00000409681 PRR4Q16378 134 aa6.55□□□□□ -1.36
POLR1A-203ENST00000409681 Q6ZVQ6 151 aa6.55□□□□□ -1.36
POLR1A-203ENST00000409681 Q8N9L7 120 aa6.55□□□□□ -1.36
POLR1A-203ENST00000409681 ST20-AS1Q8NBB2 130 aa6.55□□□□□ -1.36
POLR1A-203ENST00000409681 PSORS1C2Q9UIG4 136 aa6.54□□□□□ -1.36
POLR1A-203ENST00000409681 CDH23Q9H251 3354 aa6.54□□□□□ -1.36
POLR1A-203ENST00000409681 LINC01547P58512 204 aaPredicted RBP6.53□□□□□ -1.36
POLR1A-203ENST00000409681 C20orf197Q8N268 126 aa6.53□□□□□ -1.36
POLR1A-203ENST00000409681 IGLV5-37A0A075B6J1 123 aa6.53□□□□□ -1.36
POLR1A-203ENST00000409681 A0A1W2PNN7 141 aa6.53□□□□□ -1.36
POLR1A-203ENST00000409681 CCDC179H3BU77 68 aa6.52□□□□□ -1.37
POLR1A-203ENST00000409681 UNC80Q8N2C7 3258 aa6.52□□□□□ -1.37
POLR1A-203ENST00000409681 FLNCQ14315 2725 aa6.52□□□□□ -1.37
POLR1A-203ENST00000409681 DEFB116Q30KQ4 102 aa6.51□□□□□ -1.37
POLR1A-203ENST00000409681 HCG22E2RYF7 251 aa6.51□□□□□ -1.37
POLR1A-203ENST00000409681 A0A0U1RQV1 116 aa6.5□□□□□ -1.37
POLR1A-203ENST00000409681 SERP1Q9Y6X1 66 aa6.5□□□□□ -1.37
POLR1A-203ENST00000409681 PRO0628Q9UI54 55 aa6.5□□□□□ -1.37
POLR1A-203ENST00000409681 TRBV7-4A0A0J9YYF1 115 aa6.5□□□□□ -1.37
POLR1A-203ENST00000409681 LOC110117498A0A087WWA1 95 aa6.49□□□□□ -1.37
POLR1A-203ENST00000409681 CXCL6P80162 114 aa6.49□□□□□ -1.37
POLR1A-203ENST00000409681 FAM30AQ9NZY2 134 aa6.49□□□□□ -1.37
POLR1A-203ENST00000409681 FAM218AQ96MZ4 157 aa6.49□□□□□ -1.37
POLR1A-203ENST00000409681 LINC00313P59037 77 aa6.49□□□□□ -1.37
POLR1A-203ENST00000409681 SZT2Q5T011 3432 aa6.49□□□□□ -1.37
POLR1A-203ENST00000409681 C8orf87E5RJ46 101 aa6.48□□□□□ -1.37
POLR1A-203ENST00000409681 ATP11AUNQ6ZP68 121 aa6.48□□□□□ -1.37
POLR1A-203ENST00000409681 RPS28P62857 69 aaKnown RBP6.48□□□□□ -1.37
POLR1A-203ENST00000409681 TP53AIP1Q9HCN2 124 aa6.48□□□□□ -1.37
POLR1A-203ENST00000409681 LAMA2P24043 3122 aaKnown RBP6.47□□□□□ -1.37
POLR1A-203ENST00000409681 RETNLBQ9BQ08 111 aa6.46□□□□□ -1.37
POLR1A-203ENST00000409681 SPRR4Q96PI1 79 aa6.46□□□□□ -1.38
POLR1A-203ENST00000409681 CDIP1Q9H305 208 aa6.46□□□□□ -1.38
POLR1A-203ENST00000409681 LINC00208Q96KT6 92 aa6.46□□□□□ -1.38
POLR1A-203ENST00000409681 LINC00846Q9NV44 126 aa6.45□□□□□ -1.38
POLR1A-203ENST00000409681 PLAC8Q9NZF1 115 aa6.45□□□□□ -1.38
POLR1A-203ENST00000409681 hDV103S1A0JD37 113 aa6.45□□□□□ -1.38
POLR1A-203ENST00000409681 Q6ZQT0 140 aa6.45□□□□□ -1.38
POLR1A-203ENST00000409681 MPLKIPQ8TAP9 179 aa6.45□□□□□ -1.38
POLR1A-203ENST00000409681 TRAV7A0A075B6U4 112 aa6.44□□□□□ -1.38
POLR1A-203ENST00000409681 ITPR2Q14571 2701 aa6.44□□□□□ -1.38
POLR1A-203ENST00000409681 PRR15LQ9BU68 103 aa6.44□□□□□ -1.38
POLR1A-203ENST00000409681 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.44□□□□□ -1.38
POLR1A-203ENST00000409681 SPINK1P00995 79 aa6.43□□□□□ -1.38
POLR1A-203ENST00000409681 COL6A3P12111 3177 aa6.43□□□□□ -1.38
POLR1A-203ENST00000409681 Q96NJ1 140 aa6.43□□□□□ -1.38
POLR1A-203ENST00000409681 H0Y9P7 68 aa6.42□□□□□ -1.38
POLR1A-203ENST00000409681 HIVEP1P15822 2718 aa6.42□□□□□ -1.38
POLR1A-203ENST00000409681 IGKV2D-30A0A075B6S6 120 aa6.41□□□□□ -1.38
POLR1A-203ENST00000409681 IGKV2-30P06310 120 aa6.41□□□□□ -1.38
POLR1A-203ENST00000409681 CFAP54Q96N23 3096 aa6.41□□□□□ -1.38
POLR1A-203ENST00000409681 NOTCH1P46531 2555 aa6.41□□□□□ -1.38
POLR1A-203ENST00000409681 TRBV7-7A0A0K0K1E9 115 aa6.41□□□□□ -1.38
POLR1A-203ENST00000409681 XIRP2A4UGR9 3374 aa6.4□□□□□ -1.38
POLR1A-203ENST00000409681 IGFL1Q6UW32 110 aa6.4□□□□□ -1.38
POLR1A-203ENST00000409681 FAM229BQ4G0N7 80 aa6.4□□□□□ -1.38
POLR1A-203ENST00000409681 Q6ZR54 194 aa6.4□□□□□ -1.38
POLR1A-203ENST00000409681 KRTAP1-5Q9BYS1 174 aa6.4□□□□□ -1.39
POLR1A-203ENST00000409681 K7ERS5 55 aa6.39□□□□□ -1.39
POLR1A-203ENST00000409681 UBR5O95071 2799 aaPredicted RBP6.39□□□□□ -1.39
POLR1A-203ENST00000409681 Q8N377 158 aa6.39□□□□□ -1.39
POLR1A-203ENST00000409681 KMT2BQ9UMN6 2715 aaPredicted RBP6.39□□□□□ -1.39
POLR1A-203ENST00000409681 A8MWP4 228 aa6.38□□□□□ -1.39
POLR1A-203ENST00000409681 SNURFQ9Y675 71 aa6.38□□□□□ -1.39
POLR1A-203ENST00000409681 EIF4EBP3O60516 100 aaPredicted RBP6.37□□□□□ -1.39
POLR1A-203ENST00000409681 A0A087WVE0 104 aa6.37□□□□□ -1.39
POLR1A-203ENST00000409681 CD164Q04900 197 aa6.36□□□□□ -1.39
POLR1A-203ENST00000409681 FRYLO94915 3013 aa6.36□□□□□ -1.39
POLR1A-203ENST00000409681 ANAPC11Q9NYG5 84 aa6.36□□□□□ -1.39
POLR1A-203ENST00000409681 ITPR1Q14643 2758 aa6.35□□□□□ -1.39
POLR1A-203ENST00000409681 VPS13AQ96RL7 3174 aa6.35□□□□□ -1.39
POLR1A-203ENST00000409681 PMAIP1Q13794 54 aa6.35□□□□□ -1.39
POLR1A-203ENST00000409681 COX6B2Q6YFQ2 88 aa6.35□□□□□ -1.39
POLR1A-203ENST00000409681 PCOTHQ58A44 107 aa6.35□□□□□ -1.39
POLR1A-203ENST00000409681 C1orf64Q8NEQ6 169 aa6.35□□□□□ -1.39
POLR1A-203ENST00000409681 FAM104AQ969W3 186 aa6.35□□□□□ -1.39
POLR1A-203ENST00000409681 A6NED7 52 aa6.35□□□□□ -1.39
POLR1A-203ENST00000409681 DMXL2Q8TDJ6 3036 aa6.35□□□□□ -1.39
POLR1A-203ENST00000409681 Q5VSD8 79 aa6.34□□□□□ -1.39
POLR1A-203ENST00000409681 APCP25054 2843 aa6.34□□□□□ -1.39
POLR1A-203ENST00000409681 ERC2-IT1O76042 136 aa6.34□□□□□ -1.4
POLR1A-203ENST00000409681 SMIM29Q86T20 159 aa6.33□□□□□ -1.4
POLR1A-203ENST00000409681 H3BPC8 53 aa6.33□□□□□ -1.4
POLR1A-203ENST00000409681 MRPL34Q9BQ48 92 aaKnown RBP6.33□□□□□ -1.4
POLR1A-203ENST00000409681 NSD1Q96L73 2696 aaPredicted RBP6.33□□□□□ -1.4
POLR1A-203ENST00000409681 EYSQ5T1H1 3165 aa6.32□□□□□ -1.4
POLR1A-203ENST00000409681 KRTAP10-1P60331 282 aa6.32□□□□□ -1.4
POLR1A-203ENST00000409681 FRYQ5TBA9 3013 aa6.32□□□□□ -1.4
POLR1A-203ENST00000409681 SMCPP49901 116 aaPredicted RBP6.32□□□□□ -1.4
POLR1A-203ENST00000409681 KRTAP26-1Q6PEX3 210 aa6.32□□□□□ -1.4
POLR1A-203ENST00000409681 UTP20O75691 2785 aaKnown RBP6.32□□□□□ -1.4
POLR1A-203ENST00000409681 PRO0461Q9UI25 63 aa6.31□□□□□ -1.4
POLR1A-203ENST00000409681 ATMQ13315 3056 aa6.31□□□□□ -1.4
POLR1A-203ENST00000409681 PRR26Q8N8Z3 221 aa6.31□□□□□ -1.4
POLR1A-203ENST00000409681 C7orf65Q6ZTY9 151 aa6.31□□□□□ -1.4
POLR1A-203ENST00000409681 A0A1B0GVX0 72 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms