RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 TRGV1A0A0A0MS02 117 aa7.21□□□□□ -1.26
NIF3L1-204ENST00000409357 K7EIL1 84 aa7.21□□□□□ -1.26
NIF3L1-204ENST00000409357 IGLV6-57P01721 117 aa7.21□□□□□ -1.26
NIF3L1-204ENST00000409357 IGKV4-1P06312 121 aa7.21□□□□□ -1.26
NIF3L1-204ENST00000409357 CD164L2Q6UWJ8 174 aa7.21□□□□□ -1.26
NIF3L1-204ENST00000409357 C4orf3Q8WVX3 66 aa7.21□□□□□ -1.26
NIF3L1-204ENST00000409357 MAP6D1Q9H9H5 199 aa7.21□□□□□ -1.26
NIF3L1-204ENST00000409357 NBEAL2Q6ZNJ1 2754 aa7.2□□□□□ -1.26
NIF3L1-204ENST00000409357 EGFEM1PQ0D2K5 195 aa7.2□□□□□ -1.26
NIF3L1-204ENST00000409357 CELA1Q9UNI1 258 aa7.2□□□□□ -1.26
NIF3L1-204ENST00000409357 IGLV4-60A0A075B6I1 120 aa7.19□□□□□ -1.26
NIF3L1-204ENST00000409357 PRM2P04554 102 aa7.19□□□□□ -1.26
NIF3L1-204ENST00000409357 DAD1P61803 113 aa7.19□□□□□ -1.26
NIF3L1-204ENST00000409357 KIAA0087Q14695 138 aa7.19□□□□□ -1.26
NIF3L1-204ENST00000409357 Q6ZRP5 223 aa7.19□□□□□ -1.26
NIF3L1-204ENST00000409357 X6R8D5 127 aa7.19□□□□□ -1.26
NIF3L1-204ENST00000409357 ZCCHC13Q8WW36 166 aaKnown RBP7.19□□□□□ -1.26
NIF3L1-204ENST00000409357 SLURP1P55000 103 aa7.17□□□□□ -1.26
NIF3L1-204ENST00000409357 Q6ZQY7 126 aa7.17□□□□□ -1.26
NIF3L1-204ENST00000409357 HUWE1Q7Z6Z7 4374 aaKnown RBP7.16□□□□□ -1.26
NIF3L1-204ENST00000409357 PRR3P79522 188 aaKnown RBP7.16□□□□□ -1.26
NIF3L1-204ENST00000409357 IGHV4-30-4P0DP06 118 aa7.15□□□□□ -1.27
NIF3L1-204ENST00000409357 C1orf64Q8NEQ6 169 aa7.15□□□□□ -1.27
NIF3L1-204ENST00000409357 A0A0J9YWU9 116 aa7.14□□□□□ -1.27
NIF3L1-204ENST00000409357 CMC4P56277 68 aaPredicted RBP7.14□□□□□ -1.27
NIF3L1-204ENST00000409357 C16orf74Q96GX8 76 aa7.14□□□□□ -1.27
NIF3L1-204ENST00000409357 HIGD2AQ9BW72 106 aa7.14□□□□□ -1.27
NIF3L1-204ENST00000409357 TRAV22A0A0B4J277 110 aa7.13□□□□□ -1.27
NIF3L1-204ENST00000409357 UBE2BP63146 152 aa7.13□□□□□ -1.27
NIF3L1-204ENST00000409357 DIRC1Q969H9 104 aa7.13□□□□□ -1.27
NIF3L1-204ENST00000409357 KMT2CQ8NEZ4 4911 aaKnown RBP7.13□□□□□ -1.27
NIF3L1-204ENST00000409357 NDUFB1O75438 58 aa7.12□□□□□ -1.27
NIF3L1-204ENST00000409357 ELOF1P60002 83 aaKnown RBP7.12□□□□□ -1.27
NIF3L1-204ENST00000409357 DNAH7Q8WXX0 4024 aa7.12□□□□□ -1.27
NIF3L1-204ENST00000409357 TRGV2A0A075B6R0 118 aa7.12□□□□□ -1.27
NIF3L1-204ENST00000409357 GVQW2A0A096LPI5 108 aaPredicted RBP7.12□□□□□ -1.27
NIF3L1-204ENST00000409357 MRPL55Q7Z7F7 128 aaKnown RBP7.12□□□□□ -1.27
NIF3L1-204ENST00000409357 KTN1-AS1Q86SY8 53 aa7.12□□□□□ -1.27
NIF3L1-204ENST00000409357 CSMD3Q7Z407 3707 aa7.11□□□□□ -1.27
NIF3L1-204ENST00000409357 TRGV4A0A0C4DH28 118 aa7.1□□□□□ -1.27
NIF3L1-204ENST00000409357 IGKV3OR2-268A0A0C4DH90 116 aa7.1□□□□□ -1.27
NIF3L1-204ENST00000409357 NDUFS5O43920 106 aa7.1□□□□□ -1.27
NIF3L1-204ENST00000409357 SCXQ7RTU7 201 aa7.1□□□□□ -1.27
NIF3L1-204ENST00000409357 Q8NDZ9 215 aa7.1□□□□□ -1.27
NIF3L1-204ENST00000409357 PSCAO43653 123 aa7.09□□□□□ -1.27
NIF3L1-204ENST00000409357 LINC00588Q9Y4M8 146 aa7.09□□□□□ -1.27
NIF3L1-204ENST00000409357 SYCNQ0VAF6 134 aa7.09□□□□□ -1.27
NIF3L1-204ENST00000409357 ODF3L2Q3SX64 289 aa7.09□□□□□ -1.27
NIF3L1-204ENST00000409357 HIGD2BQ4VC39 106 aa7.09□□□□□ -1.27
NIF3L1-204ENST00000409357 B9D2Q9BPU9 175 aa7.09□□□□□ -1.27
NIF3L1-204ENST00000409357 LIMD2Q9BT23 127 aa7.09□□□□□ -1.27
NIF3L1-204ENST00000409357 NOP10Q9NPE3 64 aaKnown RBP7.09□□□□□ -1.27
NIF3L1-204ENST00000409357 UBE2AP49459 152 aa7.08□□□□□ -1.28
NIF3L1-204ENST00000409357 PHF5AQ7RTV0 110 aaKnown RBP7.08□□□□□ -1.28
NIF3L1-204ENST00000409357 ETDCA0A1B0GVM5 59 aa7.07□□□□□ -1.28
NIF3L1-204ENST00000409357 TENM2Q9NT68 2774 aa7.07□□□□□ -1.28
NIF3L1-204ENST00000409357 ZNF73O43830 326 aaPredicted RBP7.06□□□□□ -1.28
NIF3L1-204ENST00000409357 IGLV1-51P01701 117 aa7.06□□□□□ -1.28
NIF3L1-204ENST00000409357 ATP11AUNQ6ZP68 121 aa7.06□□□□□ -1.28
NIF3L1-204ENST00000409357 IGLV5-48A0A075B6I7 105 aa7.06□□□□□ -1.28
NIF3L1-204ENST00000409357 LINC00612Q8N6U2 182 aa7.06□□□□□ -1.28
NIF3L1-204ENST00000409357 SPANXA2-OT1Q8N9U9 137 aa7.06□□□□□ -1.28
NIF3L1-204ENST00000409357 RETNQ9HD89 108 aa7.06□□□□□ -1.28
NIF3L1-204ENST00000409357 Q5VV11 94 aa7.05□□□□□ -1.28
NIF3L1-204ENST00000409357 CSNK1G2-AS1Q8NCQ2 148 aa7.03□□□□□ -1.28
NIF3L1-204ENST00000409357 CHCHD10Q8WYQ3 142 aaPredicted RBP7.03□□□□□ -1.28
NIF3L1-204ENST00000409357 Q9BRP9 147 aa7.03□□□□□ -1.28
NIF3L1-204ENST00000409357 C19orf73Q9NVV2 129 aa7.03□□□□□ -1.28
NIF3L1-204ENST00000409357 RYR3Q15413 4870 aa7.03□□□□□ -1.28
NIF3L1-204ENST00000409357 H3BPC8 53 aa7.03□□□□□ -1.28
NIF3L1-204ENST00000409357 PSPHP1O15172 72 aa7.03□□□□□ -1.28
NIF3L1-204ENST00000409357 SMIM29Q86T20 159 aa7.03□□□□□ -1.28
NIF3L1-204ENST00000409357 RBM12B-AS1Q9P1G2 102 aa7.03□□□□□ -1.28
NIF3L1-204ENST00000409357 M0R378 163 aa7.02□□□□□ -1.29
NIF3L1-204ENST00000409357 GIG44P09565 113 aaPredicted RBP7.02□□□□□ -1.29
NIF3L1-204ENST00000409357 VPREB1P12018 145 aa7.02□□□□□ -1.29
NIF3L1-204ENST00000409357 LINC00269Q8N2A0 174 aa7.02□□□□□ -1.29
NIF3L1-204ENST00000409357 Q8N9L7 120 aa7.02□□□□□ -1.29
NIF3L1-204ENST00000409357 WFDC10AQ9H1F0 79 aa7.02□□□□□ -1.29
NIF3L1-204ENST00000409357 A8MUN3 132 aa7.01□□□□□ -1.29
NIF3L1-204ENST00000409357 STARD9Q9P2P6 4700 aa7.01□□□□□ -1.29
NIF3L1-204ENST00000409357 IGLV2-33A0A075B6J2 118 aaPredicted RBP7□□□□□ -1.29
NIF3L1-204ENST00000409357 LOC101927531A0A1B0GV80 90 aa7□□□□□ -1.29
NIF3L1-204ENST00000409357 C9orf116Q5BN46 136 aaPredicted RBP7□□□□□ -1.29
NIF3L1-204ENST00000409357 KCNQ1DNQ9H478 68 aa7□□□□□ -1.29
NIF3L1-204ENST00000409357 LYSTQ99698 3801 aa7□□□□□ -1.29
NIF3L1-204ENST00000409357 DYNC2H1Q8NCM8 4307 aaKnown RBP7□□□□□ -1.29
NIF3L1-204ENST00000409357 Q75L30 129 aa7□□□□□ -1.29
NIF3L1-204ENST00000409357 FAM30AQ9NZY2 134 aa7□□□□□ -1.29
NIF3L1-204ENST00000409357 SPAG11BQ08648 103 aa6.99□□□□□ -1.29
NIF3L1-204ENST00000409357 Q8N9P0 234 aaPredicted RBP6.99□□□□□ -1.29
NIF3L1-204ENST00000409357 WWC2-AS2Q96NR7 200 aa6.99□□□□□ -1.29
NIF3L1-204ENST00000409357 PLA2G2DQ9UNK4 145 aa6.99□□□□□ -1.29
NIF3L1-204ENST00000409357 A6NN06 94 aa6.98□□□□□ -1.29
NIF3L1-204ENST00000409357 C16orf90A8MZG2 172 aa6.98□□□□□ -1.29
NIF3L1-204ENST00000409357 REG3AQ06141 175 aa6.98□□□□□ -1.29
NIF3L1-204ENST00000409357 UNQ6190/PRO20217Q6UXQ8 127 aa6.98□□□□□ -1.29
NIF3L1-204ENST00000409357 SPRR4Q96PI1 79 aa6.97□□□□□ -1.29
NIF3L1-204ENST00000409357 PRO0255Q9UI72 69 aa6.96□□□□□ -1.29
NIF3L1-204ENST00000409357 KLK12Q9UKR0 248 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms