RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 IGLV1-50A0A075B6I6 118 aa2.49□□□□□ -2.01
RTN4-209ENST00000405240 J3KT08 172 aa2.49□□□□□ -2.01
RTN4-209ENST00000405240 Q8N377 158 aa2.49□□□□□ -2.01
RTN4-209ENST00000405240 C7orf33Q8WU49 177 aa2.49□□□□□ -2.01
RTN4-209ENST00000405240 PRYO14603 147 aa2.49□□□□□ -2.01
RTN4-209ENST00000405240 ERC2-IT1O76042 136 aa2.49□□□□□ -2.01
RTN4-209ENST00000405240 OXTP01178 125 aa2.49□□□□□ -2.01
RTN4-209ENST00000405240 KRTAP24-1Q3LI83 254 aa2.49□□□□□ -2.01
RTN4-209ENST00000405240 TM2D3Q9BRN9 247 aa2.49□□□□□ -2.01
RTN4-209ENST00000405240 DEFB131BA0A096LNP1 70 aa2.49□□□□□ -2.01
RTN4-209ENST00000405240 TRAV10A0A0B4J240 114 aa2.49□□□□□ -2.01
RTN4-209ENST00000405240 C1orf43Q9BWL3 253 aa2.49□□□□□ -2.01
RTN4-209ENST00000405240 HIVEP2P31629 2446 aa2.49□□□□□ -2.01
RTN4-209ENST00000405240 TEP1Q99973 2627 aaKnown RBP2.49□□□□□ -2.01
RTN4-209ENST00000405240 C11orf45Q8TAV5 145 aa2.48□□□□□ -2.01
RTN4-209ENST00000405240 Q9BRP9 147 aa2.48□□□□□ -2.01
RTN4-209ENST00000405240 LINC00588Q9Y4M8 146 aa2.48□□□□□ -2.01
RTN4-209ENST00000405240 C2CD3Q4AC94 2353 aa2.48□□□□□ -2.01
RTN4-209ENST00000405240 H7BZZ5 65 aa2.48□□□□□ -2.01
RTN4-209ENST00000405240 IGKV4-1P06312 121 aa2.48□□□□□ -2.01
RTN4-209ENST00000405240 Q6ZRX8 168 aa2.48□□□□□ -2.01
RTN4-209ENST00000405240 MRAPQ8TCY5 172 aa2.48□□□□□ -2.01
RTN4-209ENST00000405240 DNAH9Q9NYC9 4486 aa2.48□□□□□ -2.01
RTN4-209ENST00000405240 LCE6AA0A183 80 aa2.48□□□□□ -2.01
RTN4-209ENST00000405240 SPRR4Q96PI1 79 aa2.48□□□□□ -2.01
RTN4-209ENST00000405240 DHRS4-AS1Q9P1J3 65 aa2.48□□□□□ -2.01
RTN4-209ENST00000405240 HELZ2Q9BYK8 2649 aaKnown RBP2.48□□□□□ -2.01
RTN4-209ENST00000405240 MTORP42345 2549 aa2.47□□□□□ -2.01
RTN4-209ENST00000405240 FASNP49327 2511 aaKnown RBP2.47□□□□□ -2.01
RTN4-209ENST00000405240 CASC10Q5T4H9 136 aa2.47□□□□□ -2.01
RTN4-209ENST00000405240 IGKV2D-24A0A075B6R9 120 aa2.47□□□□□ -2.01
RTN4-209ENST00000405240 FAM19A5Q7Z5A7 132 aaPredicted RBP2.47□□□□□ -2.01
RTN4-209ENST00000405240 OCR1Q9BZK8 76 aa2.47□□□□□ -2.01
RTN4-209ENST00000405240 IGLV8-61A0A075B6I0 122 aa2.46□□□□□ -2.02
RTN4-209ENST00000405240 A0A1W2PNM2 257 aa2.46□□□□□ -2.02
RTN4-209ENST00000405240 Q5XG85 94 aa2.46□□□□□ -2.02
RTN4-209ENST00000405240 SMIM29Q86T20 159 aa2.46□□□□□ -2.02
RTN4-209ENST00000405240 NOTCH2Q04721 2471 aa2.46□□□□□ -2.02
RTN4-209ENST00000405240 FAM168BA1KXE4 195 aa2.46□□□□□ -2.02
RTN4-209ENST00000405240 CNBPP62633 177 aaKnown RBP2.46□□□□□ -2.02
RTN4-209ENST00000405240 HAMPP81172 84 aa2.46□□□□□ -2.02
RTN4-209ENST00000405240 DNAH10Q8IVF4 4471 aa2.45□□□□□ -2.02
RTN4-209ENST00000405240 NKAPP1Q8N9T2 125 aa2.45□□□□□ -2.02
RTN4-209ENST00000405240 PKD1L1Q8TDX9 2849 aa2.45□□□□□ -2.02
RTN4-209ENST00000405240 DNAH7Q8WXX0 4024 aa2.45□□□□□ -2.02
RTN4-209ENST00000405240 NDUFC1O43677 76 aa2.45□□□□□ -2.02
RTN4-209ENST00000405240 RMI2Q96E14 147 aa2.45□□□□□ -2.02
RTN4-209ENST00000405240 TENM3Q9P273 2699 aa2.45□□□□□ -2.02
RTN4-209ENST00000405240 A0A0U1RQV1 116 aa2.45□□□□□ -2.02
RTN4-209ENST00000405240 MRPL55Q7Z7F7 128 aaKnown RBP2.45□□□□□ -2.02
RTN4-209ENST00000405240 FBN1P35555 2871 aaKnown RBP2.45□□□□□ -2.02
RTN4-209ENST00000405240 SETD2Q9BYW2 2564 aaPredicted RBP2.44□□□□□ -2.02
RTN4-209ENST00000405240 K7EIL1 84 aa2.44□□□□□ -2.02
RTN4-209ENST00000405240 BPY2O14599 106 aa2.44□□□□□ -2.02
RTN4-209ENST00000405240 C20orf197Q8N268 126 aa2.44□□□□□ -2.02
RTN4-209ENST00000405240 Q8NBF4 154 aa2.44□□□□□ -2.02
RTN4-209ENST00000405240 SERP1Q9Y6X1 66 aa2.44□□□□□ -2.02
RTN4-209ENST00000405240 FAM236DA0A1B0GTK5 79 aa2.44□□□□□ -2.02
RTN4-209ENST00000405240 FAM236CP0DP71 79 aa2.44□□□□□ -2.02
RTN4-209ENST00000405240 NREPQ16612 68 aa2.44□□□□□ -2.02
RTN4-209ENST00000405240 ST20-AS1Q8NBB2 130 aa2.44□□□□□ -2.02
RTN4-209ENST00000405240 CSMD3Q7Z407 3707 aa2.44□□□□□ -2.02
RTN4-209ENST00000405240 PRKDCP78527 4128 aaKnown RBP2.44□□□□□ -2.02
RTN4-209ENST00000405240 C16orf90A8MZG2 172 aa2.43□□□□□ -2.02
RTN4-209ENST00000405240 H0Y9J4 135 aa2.43□□□□□ -2.02
RTN4-209ENST00000405240 SPRR1BP22528 89 aa2.43□□□□□ -2.02
RTN4-209ENST00000405240 ATP5EP56381 51 aaPredicted RBP2.43□□□□□ -2.02
RTN4-209ENST00000405240 DSCR10P59022 87 aa2.43□□□□□ -2.02
RTN4-209ENST00000405240 RPL37AP8A6NKH3 93 aa2.43□□□□□ -2.02
RTN4-209ENST00000405240 REG3GQ6UW15 175 aa2.43□□□□□ -2.02
RTN4-209ENST00000405240 ZCCHC13Q8WW36 166 aaKnown RBP2.43□□□□□ -2.02
RTN4-209ENST00000405240 KRTAP1-5Q9BYS1 174 aa2.43□□□□□ -2.02
RTN4-209ENST00000405240 C1orf137Q5JT78 98 aa2.43□□□□□ -2.02
RTN4-209ENST00000405240 SCXQ7RTU7 201 aa2.43□□□□□ -2.02
RTN4-209ENST00000405240 BAHCC1Q9P281 2608 aa2.42□□□□□ -2.02
RTN4-209ENST00000405240 ETDCA0A1B0GVM5 59 aa2.42□□□□□ -2.02
RTN4-209ENST00000405240 TMEM254Q8TBM7 123 aa2.42□□□□□ -2.02
RTN4-209ENST00000405240 APLNQ9ULZ1 77 aa2.42□□□□□ -2.02
RTN4-209ENST00000405240 DNAH6Q9C0G6 4158 aa2.42□□□□□ -2.02
RTN4-209ENST00000405240 FUSP35637 526 aaKnown RBP eCLIP2.42□□□□□ -2.02
RTN4-209ENST00000405240 Q8N9L7 120 aa2.42□□□□□ -2.02
RTN4-209ENST00000405240 VPS13DQ5THJ4 4388 aa2.42□□□□□ -2.02
RTN4-209ENST00000405240 HECTD4Q9Y4D8 3996 aa2.42□□□□□ -2.02
RTN4-209ENST00000405240 A0A096LNI7 61 aa2.42□□□□□ -2.02
RTN4-209ENST00000405240 A0A1W2PNN7 141 aa2.42□□□□□ -2.02
RTN4-209ENST00000405240 F8WEM9 126 aa2.42□□□□□ -2.02
RTN4-209ENST00000405240 C5orf47Q569G3 176 aa2.42□□□□□ -2.02
RTN4-209ENST00000405240 ATRQ13535 2644 aa2.41□□□□□ -2.02
RTN4-209ENST00000405240 MAST4O15021 2626 aa2.41□□□□□ -2.02
RTN4-209ENST00000405240 C3orf84H3BNL1 204 aa2.41□□□□□ -2.02
RTN4-209ENST00000405240 KRTAP13-1Q8IUC0 172 aa2.41□□□□□ -2.02
RTN4-209ENST00000405240 DEFB105AQ8NG35 78 aa2.41□□□□□ -2.02
RTN4-209ENST00000405240 SNURFQ9Y675 71 aa2.41□□□□□ -2.02
RTN4-209ENST00000405240 LRCOL1A6NCL2 159 aa2.41□□□□□ -2.02
RTN4-209ENST00000405240 IGFL1Q6UW32 110 aa2.41□□□□□ -2.02
RTN4-209ENST00000405240 KRTAP11-1Q8IUC1 163 aa2.41□□□□□ -2.02
RTN4-209ENST00000405240 LINC00476Q8WZB0 136 aa2.41□□□□□ -2.02
RTN4-209ENST00000405240 Q6ZRN7 208 aaPredicted RBP2.4□□□□□ -2.02
RTN4-209ENST00000405240 FP248Q71RG6 208 aaPredicted RBP2.4□□□□□ -2.02
RTN4-209ENST00000405240 KRTAP29-1A8MX34 341 aaPredicted RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms