RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 CAMK2N2Q96S95 79 aa6.6□□□□□ -1.35
PTCHD4-202ENST00000398738 TRBV7-4A0A0J9YYF1 115 aa6.59□□□□□ -1.35
PTCHD4-202ENST00000398738 PDE6GP18545 87 aa6.59□□□□□ -1.35
PTCHD4-202ENST00000398738 PRR4Q16378 134 aa6.59□□□□□ -1.35
PTCHD4-202ENST00000398738 C16orf95Q9H693 158 aa6.59□□□□□ -1.35
PTCHD4-202ENST00000398738 PDZD2O15018 2839 aa6.58□□□□□ -1.36
PTCHD4-202ENST00000398738 HIVEP1P15822 2718 aa6.58□□□□□ -1.36
PTCHD4-202ENST00000398738 BAHCC1Q9P281 2608 aa6.58□□□□□ -1.36
PTCHD4-202ENST00000398738 PKD1L1Q8TDX9 2849 aa6.58□□□□□ -1.36
PTCHD4-202ENST00000398738 FUSP35637 526 aaKnown RBP eCLIP6.57□□□□□ -1.36
PTCHD4-202ENST00000398738 FASNP49327 2511 aaKnown RBP6.57□□□□□ -1.36
PTCHD4-202ENST00000398738 C9orf66Q5T8R8 295 aa6.56□□□□□ -1.36
PTCHD4-202ENST00000398738 A0A0J9YWU9 116 aa6.55□□□□□ -1.36
PTCHD4-202ENST00000398738 IGHV4-30-4P0DP06 118 aa6.55□□□□□ -1.36
PTCHD4-202ENST00000398738 EPM2AB3EWF7 344 aa6.55□□□□□ -1.36
PTCHD4-202ENST00000398738 ELOF1P60002 83 aaKnown RBP6.55□□□□□ -1.36
PTCHD4-202ENST00000398738 Q6ZRU5 148 aa6.55□□□□□ -1.36
PTCHD4-202ENST00000398738 NDUFC1O43677 76 aa6.54□□□□□ -1.36
PTCHD4-202ENST00000398738 BCE1O60756 84 aa6.54□□□□□ -1.36
PTCHD4-202ENST00000398738 IGKV4-1P06312 121 aa6.54□□□□□ -1.36
PTCHD4-202ENST00000398738 LINC00612Q8N6U2 182 aa6.54□□□□□ -1.36
PTCHD4-202ENST00000398738 F8WDY8 70 aa6.54□□□□□ -1.36
PTCHD4-202ENST00000398738 SMR3AQ99954 134 aa6.54□□□□□ -1.36
PTCHD4-202ENST00000398738 KRTAP1-3Q8IUG1 177 aa6.54□□□□□ -1.36
PTCHD4-202ENST00000398738 TENM1Q9UKZ4 2725 aa6.53□□□□□ -1.36
PTCHD4-202ENST00000398738 RPL37AP8A6NKH3 93 aa6.53□□□□□ -1.36
PTCHD4-202ENST00000398738 SMIM29Q86T20 159 aa6.53□□□□□ -1.36
PTCHD4-202ENST00000398738 WFDC10BQ8IUB3 73 aa6.53□□□□□ -1.36
PTCHD4-202ENST00000398738 LYRM9A8MSI8 78 aa6.53□□□□□ -1.36
PTCHD4-202ENST00000398738 VPREB1P12018 145 aa6.52□□□□□ -1.37
PTCHD4-202ENST00000398738 LELP1Q5T871 98 aa6.52□□□□□ -1.37
PTCHD4-202ENST00000398738 TRRAPQ9Y4A5 3859 aa6.52□□□□□ -1.37
PTCHD4-202ENST00000398738 KRTAP10-3P60369 221 aa6.52□□□□□ -1.37
PTCHD4-202ENST00000398738 A0A0G2JQZ4 141 aa6.51□□□□□ -1.37
PTCHD4-202ENST00000398738 A0A1W2PNN7 141 aa6.51□□□□□ -1.37
PTCHD4-202ENST00000398738 M0R378 163 aa6.51□□□□□ -1.37
PTCHD4-202ENST00000398738 ESRGQ1W209 222 aa6.5□□□□□ -1.37
PTCHD4-202ENST00000398738 DEFB116Q30KQ4 102 aa6.5□□□□□ -1.37
PTCHD4-202ENST00000398738 C1orf195Q5TG92 126 aa6.5□□□□□ -1.37
PTCHD4-202ENST00000398738 OCR1Q9BZK8 76 aa6.5□□□□□ -1.37
PTCHD4-202ENST00000398738 HECTD1Q9ULT8 2610 aa6.5□□□□□ -1.37
PTCHD4-202ENST00000398738 IGKV2D-24A0A075B6R9 120 aa6.5□□□□□ -1.37
PTCHD4-202ENST00000398738 SPART-AS1P0CW21 52 aa6.5□□□□□ -1.37
PTCHD4-202ENST00000398738 PSPHP1O15172 72 aa6.5□□□□□ -1.37
PTCHD4-202ENST00000398738 NKAPP1Q8N9T2 125 aa6.5□□□□□ -1.37
PTCHD4-202ENST00000398738 Q6ZRP5 223 aa6.49□□□□□ -1.37
PTCHD4-202ENST00000398738 ST20-AS1Q8NBB2 130 aa6.48□□□□□ -1.37
PTCHD4-202ENST00000398738 PRR34Q9NV39 138 aa6.48□□□□□ -1.37
PTCHD4-202ENST00000398738 H3BQ85 93 aa6.47□□□□□ -1.37
PTCHD4-202ENST00000398738 ATP5EP56381 51 aaPredicted RBP6.47□□□□□ -1.37
PTCHD4-202ENST00000398738 KPRPQ5T749 579 aaPredicted RBP6.47□□□□□ -1.37
PTCHD4-202ENST00000398738 Q8N377 158 aa6.47□□□□□ -1.37
PTCHD4-202ENST00000398738 SERTAD4-AS1Q5TG53 156 aa6.46□□□□□ -1.37
PTCHD4-202ENST00000398738 Q6ZTC4 211 aa6.46□□□□□ -1.37
PTCHD4-202ENST00000398738 RETNQ9HD89 108 aa6.46□□□□□ -1.37
PTCHD4-202ENST00000398738 APOC4P55056 127 aa6.46□□□□□ -1.38
PTCHD4-202ENST00000398738 Q8NAQ8 132 aa6.46□□□□□ -1.38
PTCHD4-202ENST00000398738 GVQW2A0A096LPI5 108 aaPredicted RBP6.45□□□□□ -1.38
PTCHD4-202ENST00000398738 EGFEM1PQ0D2K5 195 aa6.45□□□□□ -1.38
PTCHD4-202ENST00000398738 FAM168BA1KXE4 195 aa6.45□□□□□ -1.38
PTCHD4-202ENST00000398738 C1orf137Q5JT78 98 aa6.44□□□□□ -1.38
PTCHD4-202ENST00000398738 C7orf33Q8WU49 177 aa6.44□□□□□ -1.38
PTCHD4-202ENST00000398738 A0A1W2PNM2 257 aa6.44□□□□□ -1.38
PTCHD4-202ENST00000398738 OTOGQ6ZRI0 2925 aa6.44□□□□□ -1.38
PTCHD4-202ENST00000398738 C15orf56Q8N910 161 aa6.44□□□□□ -1.38
PTCHD4-202ENST00000398738 C1orf64Q8NEQ6 169 aa6.44□□□□□ -1.38
PTCHD4-202ENST00000398738 V9GYY9 64 aa6.44□□□□□ -1.38
PTCHD4-202ENST00000398738 ANK3Q12955 4377 aaKnown RBP6.43□□□□□ -1.38
PTCHD4-202ENST00000398738 K7EQZ3 153 aa6.43□□□□□ -1.38
PTCHD4-202ENST00000398738 WFDC13Q8IUB5 93 aa6.43□□□□□ -1.38
PTCHD4-202ENST00000398738 SYCNQ0VAF6 134 aa6.43□□□□□ -1.38
PTCHD4-202ENST00000398738 ETDCA0A1B0GVM5 59 aa6.42□□□□□ -1.38
PTCHD4-202ENST00000398738 UBE2BP63146 152 aa6.42□□□□□ -1.38
PTCHD4-202ENST00000398738 KRTAP1-1Q07627 177 aa6.42□□□□□ -1.38
PTCHD4-202ENST00000398738 LCE4AQ5TA78 99 aa6.42□□□□□ -1.38
PTCHD4-202ENST00000398738 MAST4O15021 2626 aa6.42□□□□□ -1.38
PTCHD4-202ENST00000398738 ERC2-IT1O76042 136 aa6.42□□□□□ -1.38
PTCHD4-202ENST00000398738 NOTCH1P46531 2555 aa6.41□□□□□ -1.38
PTCHD4-202ENST00000398738 TENM3Q9P273 2699 aa6.41□□□□□ -1.38
PTCHD4-202ENST00000398738 KRTAP10-2P60368 255 aa6.41□□□□□ -1.38
PTCHD4-202ENST00000398738 FLNBO75369 2602 aaKnown RBP6.41□□□□□ -1.38
PTCHD4-202ENST00000398738 hDV103S1A0JD37 113 aa6.39□□□□□ -1.39
PTCHD4-202ENST00000398738 Q9BRP9 147 aa6.39□□□□□ -1.39
PTCHD4-202ENST00000398738 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.39□□□□□ -1.39
PTCHD4-202ENST00000398738 DSCR10P59022 87 aa6.38□□□□□ -1.39
PTCHD4-202ENST00000398738 SEC61GP60059 68 aa6.38□□□□□ -1.39
PTCHD4-202ENST00000398738 SRRM2Q9UQ35 2752 aaKnown RBP6.37□□□□□ -1.39
PTCHD4-202ENST00000398738 A8MU10 97 aa6.37□□□□□ -1.39
PTCHD4-202ENST00000398738 RPL37AP61513 92 aaKnown RBP6.37□□□□□ -1.39
PTCHD4-202ENST00000398738 KRTAP26-1Q6PEX3 210 aa6.37□□□□□ -1.39
PTCHD4-202ENST00000398738 KCNQ1DNQ9H478 68 aa6.37□□□□□ -1.39
PTCHD4-202ENST00000398738 IGLV5-48A0A075B6I7 105 aa6.36□□□□□ -1.39
PTCHD4-202ENST00000398738 A8MUN3 132 aa6.36□□□□□ -1.39
PTCHD4-202ENST00000398738 CASC10Q5T4H9 136 aa6.36□□□□□ -1.39
PTCHD4-202ENST00000398738 Q6ZRX8 168 aa6.36□□□□□ -1.39
PTCHD4-202ENST00000398738 Q8NBF4 154 aa6.36□□□□□ -1.39
PTCHD4-202ENST00000398738 COL6A5A8TX70 2615 aa6.36□□□□□ -1.39
PTCHD4-202ENST00000398738 LINC00208Q96KT6 92 aa6.36□□□□□ -1.39
PTCHD4-202ENST00000398738 A0A096LNI7 61 aa6.35□□□□□ -1.39
PTCHD4-202ENST00000398738 TRAV22A0A0B4J277 110 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms