RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 CELSR3Q9NYQ7 3312 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 SONP18583 2426 aaKnown RBP0.27□□□□□ -2.37
CD47-203ENST00000398258 CHD9Q3L8U1 2897 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 DCHS2Q6V1P9 2916 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 BOD1L1Q8NFC6 3051 aa0.27□□□□□ -2.37
CD47-203ENST00000398258 SPTBN2O15020 2390 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 TGP01266 2768 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 CHD7Q9P2D1 2997 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 TRIOO75962 3097 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 VPS13AQ96RL7 3174 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 DNAH14Q0VDD8 3507 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 A0A087WWC5 75 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 PIGBOS1A0A0B4J2F0 54 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 EFCAB10A6NFE3 127 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 H0YGG7 62 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 SPRR2EP22531 72 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 SPRR2DP22532 72 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 S100PP25815 95 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 SPRR2BP35325 72 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 SPRR2AP35326 72 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 UBE2D2P62837 147 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 CATR1Q13166 79 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 DEFB136Q30KP8 78 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 Q56UQ5 140 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 BAGE3Q86Y29 109 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 C1orf54Q8WWF1 131 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 AQP10Q96PS8 301 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 DPY30Q9C005 99 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 KAAG1Q9UBP8 84 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 TIMM8BQ9Y5J9 83 aaPredicted RBP0.26□□□□□ -2.37
CD47-203ENST00000398258 HILPDAQ9Y5L2 63 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 SRRM2Q9UQ35 2752 aaKnown RBP0.26□□□□□ -2.37
CD47-203ENST00000398258 MUC2Q02817 5179 aa0.26□□□□□ -2.37
CD47-203ENST00000398258 KIAA1109Q2LD37 5005 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 FRYLO94915 3013 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 STAB2Q8WWQ8 2551 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 PLXNA2O75051 1894 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 CRYM-AS1A6NIL9 109 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 PDCD5O14737 125 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 SNAPC5O75971 98 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 DEFB130BP0DP73 79 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 DEFB130AP0DP74 79 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 FGF7P21781 194 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 PRCDQ00LT1 54 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 COX6A2Q02221 97 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 C12orf73Q69YU5 71 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 SSBP3-AS1Q7Z2R9 100 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 DEFB106AQ8N104 65 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 TMEM167AQ8TBQ9 72 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 PPP3R2Q96LZ3 170 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 S100A13Q99584 98 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 NPVFQ9HCQ7 196 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 SCN3BQ9NY72 215 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 RABAC1Q9UI14 185 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 PRO0255Q9UI72 69 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 ATMQ13315 3056 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 NEBP20929 6669 aa0.25□□□□□ -2.37
CD47-203ENST00000398258 MGAQ8IWI9 3026 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 DMXL2Q8TDJ6 3036 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 CELSR1Q9NYQ6 3014 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 BSNQ9UPA5 3926 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.24□□□□□ -2.377e-7■■■□□ 17
CD47-203ENST00000398258 ASXL3Q9C0F0 2248 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 A0A0D9SFI3 127 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 G3V318 75 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 H3BQF6 201 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 M0R135 149 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 CORTO00230 105 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 DEFB4AO15263 64 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 DLEU1O43261 78 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 SPINK1P00995 79 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 APOC2P02655 101 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 GYPAP02724 150 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 IFI6P09912 130 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 HTN1P15515 57 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 RPS29P62273 56 aaKnown RBP0.24□□□□□ -2.37
CD47-203ENST00000398258 SPAG11BQ08648 103 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 DEFB114Q30KQ6 69 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 LINC01556Q5JQF7 62 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 CFAP126Q5VTH2 177 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 RPS27LQ71UM5 84 aaKnown RBP0.24□□□□□ -2.37
CD47-203ENST00000398258 ZNF720Q7Z2F6 126 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 TMEM263Q8WUH6 116 aaKnown RBP0.24□□□□□ -2.37
CD47-203ENST00000398258 PP6455Q8WZ26 134 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 SPRR2FQ96RM1 72 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 ABRACLQ9P1F3 81 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 CACFD1Q9UGQ2 172 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 R4GMQ9 66 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 SMG1Q96Q15 3661 aaKnown RBP0.24□□□□□ -2.37
CD47-203ENST00000398258 CSMD1Q96PZ7 3565 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 MYO15AQ9UKN7 3530 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 COL7A1Q02388 2944 aa0.24□□□□□ -2.37
CD47-203ENST00000398258 LAMA1P25391 3075 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 SVEP1Q4LDE5 3571 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 WDFY3Q8IZQ1 3526 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 TRAV30A0A087WSZ9 112 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 CTXND1A0A1B0GTU2 59 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 PVALEFA0A1B0GWK0 134 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 ZNF815PA8K554 130 aa0.23□□□□□ -2.37
CD47-203ENST00000398258 TMEM262E9PQX1 116 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms