RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 TTTY13Q9BZ97 58 aa11.19□□□□□ -0.62
COLCA2-201ENST00000398035 TNXBP22105 4242 aa11.19□□□□□ -0.62
COLCA2-201ENST00000398035 KRTAP4-16G5E9R7 235 aaPredicted RBP11.18□□□□□ -0.62
COLCA2-201ENST00000398035 EIF4EBP3O60516 100 aaPredicted RBP11.17□□□□□ -0.62
COLCA2-201ENST00000398035 PPDPFQ9H3Y8 114 aa11.17□□□□□ -0.62
COLCA2-201ENST00000398035 ZNF706Q9Y5V0 76 aaPredicted RBP11.17□□□□□ -0.62
COLCA2-201ENST00000398035 IFITM1P13164 125 aa11.16□□□□□ -0.62
COLCA2-201ENST00000398035 PYY3Q5JQD4 70 aa11.16□□□□□ -0.62
COLCA2-201ENST00000398035 SPANXDQ9BXN6 97 aa11.16□□□□□ -0.62
COLCA2-201ENST00000398035 TYMSOSQ8TAI1 123 aa11.15□□□□□ -0.62
COLCA2-201ENST00000398035 TRAV23DV6A0A075B6W5 121 aa11.14□□□□□ -0.63
COLCA2-201ENST00000398035 HINT1P49773 126 aaPredicted RBP11.14□□□□□ -0.63
COLCA2-201ENST00000398035 JOSD1Q15040 202 aaPredicted RBP11.14□□□□□ -0.63
COLCA2-201ENST00000398035 PCP2Q8IVA1 136 aa11.14□□□□□ -0.63
COLCA2-201ENST00000398035 A0A087X002 238 aa11.13□□□□□ -0.63
COLCA2-201ENST00000398035 B5MCH6 92 aa11.13□□□□□ -0.63
COLCA2-201ENST00000398035 SCGB1D1O95968 90 aa11.13□□□□□ -0.63
COLCA2-201ENST00000398035 ZNF73O43830 326 aaPredicted RBP11.12□□□□□ -0.63
COLCA2-201ENST00000398035 OR13C6PQ8NH95 151 aa11.12□□□□□ -0.63
COLCA2-201ENST00000398035 ANAPC11Q9NYG5 84 aa11.12□□□□□ -0.63
COLCA2-201ENST00000398035 SMCR5Q8TEV8 140 aa11.11□□□□□ -0.63
COLCA2-201ENST00000398035 Q6ZRX8 168 aa11.1□□□□□ -0.63
COLCA2-201ENST00000398035 SPRR4Q96PI1 79 aa11.1□□□□□ -0.63
COLCA2-201ENST00000398035 TSTD3H0UI37 97 aa11.09□□□□□ -0.63
COLCA2-201ENST00000398035 HMCN2Q8NDA2 5059 aa11.08□□□□□ -0.64
COLCA2-201ENST00000398035 KRTAP13-2Q52LG2 175 aa11.06□□□□□ -0.64
COLCA2-201ENST00000398035 MUSTN1Q8IVN3 82 aa11.06□□□□□ -0.64
COLCA2-201ENST00000398035 Q9BRP9 147 aa11.03□□□□□ -0.64
COLCA2-201ENST00000398035 LINC00483Q53H64 154 aa11.01□□□□□ -0.65
COLCA2-201ENST00000398035 DHRS4-AS1Q9P1J3 65 aa11.01□□□□□ -0.65
COLCA2-201ENST00000398035 TRAV13-2A0A0B4J235 113 aa11.01□□□□□ -0.65
COLCA2-201ENST00000398035 A6NDN8 102 aa11.01□□□□□ -0.65
COLCA2-201ENST00000398035 GAGE2AQ6NT46 116 aa11.01□□□□□ -0.65
COLCA2-201ENST00000398035 LINC00304Q8N9R0 145 aa11.01□□□□□ -0.65
COLCA2-201ENST00000398035 TRBV7-6A0A0J9YX20 115 aa11□□□□□ -0.65
COLCA2-201ENST00000398035 ERC2-IT1O76042 136 aa10.99□□□□□ -0.65
COLCA2-201ENST00000398035 TSPAN13O95857 204 aa10.99□□□□□ -0.65
COLCA2-201ENST00000398035 COX8AP10176 69 aa10.99□□□□□ -0.65
COLCA2-201ENST00000398035 SPAG11AQ6PDA7 123 aa10.99□□□□□ -0.65
COLCA2-201ENST00000398035 DLEU1O43261 78 aa10.98□□□□□ -0.65
COLCA2-201ENST00000398035 COX7BP24311 80 aa10.97□□□□□ -0.65
COLCA2-201ENST00000398035 C6orf99Q4VX62 202 aa10.97□□□□□ -0.65
COLCA2-201ENST00000398035 C3orf22Q8N5N4 141 aa10.97□□□□□ -0.65
COLCA2-201ENST00000398035 ELOF1P60002 83 aaKnown RBP10.96□□□□□ -0.65
COLCA2-201ENST00000398035 C4orf48Q5BLP8 95 aa10.96□□□□□ -0.65
COLCA2-201ENST00000398035 C14orf144Q96I85 54 aa10.96□□□□□ -0.65
COLCA2-201ENST00000398035 SSBP3-AS1Q7Z2R9 100 aa10.94□□□□□ -0.66
COLCA2-201ENST00000398035 A0A1B0GWB2 263 aa10.93□□□□□ -0.66
COLCA2-201ENST00000398035 A4D1N5 150 aa10.93□□□□□ -0.66
COLCA2-201ENST00000398035 HIST1H4GQ99525 98 aa10.93□□□□□ -0.66
COLCA2-201ENST00000398035 VAMP8Q9BV40 100 aa10.93□□□□□ -0.66
COLCA2-201ENST00000398035 SLC25A34Q6PIV7 304 aa10.92□□□□□ -0.66
COLCA2-201ENST00000398035 PRO1933Q9H354 126 aa10.92□□□□□ -0.66
COLCA2-201ENST00000398035 PRR4Q16378 134 aa10.92□□□□□ -0.66
COLCA2-201ENST00000398035 SPATA45Q537H7 98 aa10.92□□□□□ -0.66
COLCA2-201ENST00000398035 PAM16Q9Y3D7 125 aa10.92□□□□□ -0.66
COLCA2-201ENST00000398035 VAMP3Q15836 100 aa10.9□□□□□ -0.66
COLCA2-201ENST00000398035 IGLV9-49A0A0B4J1Y8 123 aa10.88□□□□□ -0.67
COLCA2-201ENST00000398035 SPINK1P00995 79 aa10.88□□□□□ -0.67
COLCA2-201ENST00000398035 ST20-AS1Q8NBB2 130 aa10.88□□□□□ -0.67
COLCA2-201ENST00000398035 Q8NBF4 154 aa10.88□□□□□ -0.67
COLCA2-201ENST00000398035 SMIM11BQ8TCY0 68 aa10.88□□□□□ -0.67
COLCA2-201ENST00000398035 NHP2Q9NX24 153 aaKnown RBP10.88□□□□□ -0.67
COLCA2-201ENST00000398035 HIGD1BQ9P298 99 aa10.88□□□□□ -0.67
COLCA2-201ENST00000398035 SPRR1BP22528 89 aa10.87□□□□□ -0.67
COLCA2-201ENST00000398035 MOBPQ13875 183 aa10.86□□□□□ -0.67
COLCA2-201ENST00000398035 TAL2Q16559 108 aa10.85□□□□□ -0.67
COLCA2-201ENST00000398035 LAMTOR3Q9UHA4 124 aa10.84□□□□□ -0.67
COLCA2-201ENST00000398035 SLC25A20O43772 301 aa10.84□□□□□ -0.67
COLCA2-201ENST00000398035 TEX49A0A1B0GTD5 131 aa10.83□□□□□ -0.68
COLCA2-201ENST00000398035 M0R143 59 aa10.82□□□□□ -0.68
COLCA2-201ENST00000398035 RPS29P62273 56 aaKnown RBP10.82□□□□□ -0.68
COLCA2-201ENST00000398035 C9orf153Q5TBE3 101 aa10.82□□□□□ -0.68
COLCA2-201ENST00000398035 UBR4Q5T4S7 5183 aa10.81□□□□□ -0.68
COLCA2-201ENST00000398035 A0A1B0GV90 55 aa10.79□□□□□ -0.68
COLCA2-201ENST00000398035 DEFB105AQ8NG35 78 aa10.79□□□□□ -0.68
COLCA2-201ENST00000398035 BVES-AS1Q5T3Y7 98 aa10.78□□□□□ -0.68
COLCA2-201ENST00000398035 LRP2P98164 4655 aa10.78□□□□□ -0.68
COLCA2-201ENST00000398035 RAB37Q96AX2 223 aa10.77□□□□□ -0.68
COLCA2-201ENST00000398035 IGLV5-48A0A075B6I7 105 aa10.76□□□□□ -0.69
COLCA2-201ENST00000398035 TMEM238LA0A1B0GVL6 79 aa10.76□□□□□ -0.69
COLCA2-201ENST00000398035 A6NJY4 79 aa10.76□□□□□ -0.69
COLCA2-201ENST00000398035 LINC00575Q6W349 94 aa10.76□□□□□ -0.69
COLCA2-201ENST00000398035 C2orf91Q6ZV80 131 aa10.76□□□□□ -0.69
COLCA2-201ENST00000398035 RETNLBQ9BQ08 111 aa10.76□□□□□ -0.69
COLCA2-201ENST00000398035 CFC1BP0CG36 223 aa10.75□□□□□ -0.69
COLCA2-201ENST00000398035 CFC1P0CG37 223 aa10.75□□□□□ -0.69
COLCA2-201ENST00000398035 FP248Q71RG6 208 aaPredicted RBP10.75□□□□□ -0.69
COLCA2-201ENST00000398035 IGLV7-46A0A075B6I9 117 aa10.75□□□□□ -0.69
COLCA2-201ENST00000398035 CEND1Q8N111 149 aa10.75□□□□□ -0.69
COLCA2-201ENST00000398035 SNHG12Q9BXW3 62 aa10.75□□□□□ -0.69
COLCA2-201ENST00000398035 A0A0B4J2C4 111 aa10.74□□□□□ -0.69
COLCA2-201ENST00000398035 hADV29S1A0JD25 119 aa10.74□□□□□ -0.69
COLCA2-201ENST00000398035 SNCGO76070 127 aa10.73□□□□□ -0.69
COLCA2-201ENST00000398035 Q1RN00 199 aa10.72□□□□□ -0.69
COLCA2-201ENST00000398035 UQCR10Q9UDW1 63 aa10.72□□□□□ -0.69
COLCA2-201ENST00000398035 LINC01547P58512 204 aaPredicted RBP10.71□□□□□ -0.69
COLCA2-201ENST00000398035 TPRXLQ17RH7 258 aa10.7□□□□□ -0.7
COLCA2-201ENST00000398035 H0YGX0 51 aa10.69□□□□□ -0.7
COLCA2-201ENST00000398035 H7C2G1 150 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms