RNA–Protein interactions for RNA: ENST00000397938.6

EWSR1-206, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-206ENST00000397938 Q6ZTC4 211 aa11.34□□□□□ -0.59
EWSR1-206ENST00000397938 DEFB105AQ8NG35 78 aa11.34□□□□□ -0.59
EWSR1-206ENST00000397938 KPRPQ5T749 579 aaPredicted RBP11.33□□□□□ -0.59
EWSR1-206ENST00000397938 C1orf43Q9BWL3 253 aa11.32□□□□□ -0.6
EWSR1-206ENST00000397938 ESRGQ1W209 222 aa11.32□□□□□ -0.6
EWSR1-206ENST00000397938 SMIM29Q86T20 159 aa11.31□□□□□ -0.6
EWSR1-206ENST00000397938 NKAPP1Q8N9T2 125 aa11.31□□□□□ -0.6
EWSR1-206ENST00000397938 A0A1B0GW54 56 aa11.3□□□□□ -0.6
EWSR1-206ENST00000397938 MPLKIPQ8TAP9 179 aa11.3□□□□□ -0.6
EWSR1-206ENST00000397938 C7orf33Q8WU49 177 aa11.3□□□□□ -0.6
EWSR1-206ENST00000397938 SERTAD4-AS1Q5TG53 156 aa11.29□□□□□ -0.6
EWSR1-206ENST00000397938 F8WDY8 70 aa11.29□□□□□ -0.6
EWSR1-206ENST00000397938 H3BNG1 76 aa11.29□□□□□ -0.6
EWSR1-206ENST00000397938 BRK1Q8WUW1 75 aa11.29□□□□□ -0.6
EWSR1-206ENST00000397938 A0A1W2PNM2 257 aa11.28□□□□□ -0.6
EWSR1-206ENST00000397938 FAM30AQ9NZY2 134 aa11.28□□□□□ -0.6
EWSR1-206ENST00000397938 LCE6AA0A183 80 aa11.28□□□□□ -0.6
EWSR1-206ENST00000397938 SYCNQ0VAF6 134 aa11.28□□□□□ -0.6
EWSR1-206ENST00000397938 SMR3AQ99954 134 aa11.28□□□□□ -0.6
EWSR1-206ENST00000397938 HIVEP1P15822 2718 aa11.26□□□□□ -0.61
EWSR1-206ENST00000397938 DHRS4-AS1Q9P1J3 65 aa11.26□□□□□ -0.61
EWSR1-206ENST00000397938 TNP2Q05952 138 aa11.26□□□□□ -0.61
EWSR1-206ENST00000397938 Q6ZRX8 168 aa11.25□□□□□ -0.61
EWSR1-206ENST00000397938 PKIGQ9Y2B9 76 aa11.24□□□□□ -0.61
EWSR1-206ENST00000397938 IGKV2D-24A0A075B6R9 120 aa11.24□□□□□ -0.61
EWSR1-206ENST00000397938 C1orf137Q5JT78 98 aa11.23□□□□□ -0.61
EWSR1-206ENST00000397938 Q8NBF4 154 aa11.23□□□□□ -0.61
EWSR1-206ENST00000397938 Q9BRP9 147 aa11.23□□□□□ -0.61
EWSR1-206ENST00000397938 KRTAP4-16G5E9R7 235 aaPredicted RBP11.22□□□□□ -0.61
EWSR1-206ENST00000397938 PLA2G2DQ9UNK4 145 aa11.21□□□□□ -0.62
EWSR1-206ENST00000397938 TENM4Q6N022 2769 aa11.2□□□□□ -0.62
EWSR1-206ENST00000397938 hDV103S1A0JD37 113 aa11.2□□□□□ -0.62
EWSR1-206ENST00000397938 LINC01556Q5JQF7 62 aa11.2□□□□□ -0.62
EWSR1-206ENST00000397938 SPRR4Q96PI1 79 aa11.2□□□□□ -0.62
EWSR1-206ENST00000397938 ITPR2Q14571 2701 aa11.2□□□□□ -0.62
EWSR1-206ENST00000397938 KMT2BQ9UMN6 2715 aaPredicted RBP11.2□□□□□ -0.62
EWSR1-206ENST00000397938 DSCR10P59022 87 aa11.2□□□□□ -0.62
EWSR1-206ENST00000397938 SPRR1AP35321 89 aa11.19□□□□□ -0.62
EWSR1-206ENST00000397938 ST20-AS1Q8NBB2 130 aa11.19□□□□□ -0.62
EWSR1-206ENST00000397938 ZCCHC13Q8WW36 166 aaKnown RBP11.19□□□□□ -0.62
EWSR1-206ENST00000397938 RPL37AP8A6NKH3 93 aa11.19□□□□□ -0.62
EWSR1-206ENST00000397938 TLX1NBP0CAT3 122 aa11.19□□□□□ -0.62
EWSR1-206ENST00000397938 ETDCA0A1B0GVM5 59 aa11.18□□□□□ -0.62
EWSR1-206ENST00000397938 UNC79Q9P2D8 2635 aa11.17□□□□□ -0.62
EWSR1-206ENST00000397938 IGLV1-50A0A075B6I6 118 aa11.17□□□□□ -0.62
EWSR1-206ENST00000397938 RETNQ9HD89 108 aa11.17□□□□□ -0.62
EWSR1-206ENST00000397938 IGLV5-37A0A075B6J1 123 aa11.16□□□□□ -0.62
EWSR1-206ENST00000397938 K7EQZ3 153 aa11.16□□□□□ -0.62
EWSR1-206ENST00000397938 TENM1Q9UKZ4 2725 aa11.16□□□□□ -0.62
EWSR1-206ENST00000397938 FAM168BA1KXE4 195 aa11.15□□□□□ -0.62
EWSR1-206ENST00000397938 NOTCH2Q04721 2471 aa11.14□□□□□ -0.63
EWSR1-206ENST00000397938 C1orf64Q8NEQ6 169 aa11.13□□□□□ -0.63
EWSR1-206ENST00000397938 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.12□□□□□ -0.63
EWSR1-206ENST00000397938 KRTAP7-1Q8IUC3 87 aa11.11□□□□□ -0.63
EWSR1-206ENST00000397938 C1orf195Q5TG92 126 aa11.1□□□□□ -0.63
EWSR1-206ENST00000397938 HCG22E2RYF7 251 aa11.1□□□□□ -0.63
EWSR1-206ENST00000397938 Q1T7F1 81 aa11.1□□□□□ -0.63
EWSR1-206ENST00000397938 TRRAPQ9Y4A5 3859 aa11.09□□□□□ -0.63
EWSR1-206ENST00000397938 PKD1L1Q8TDX9 2849 aa11.08□□□□□ -0.64
EWSR1-206ENST00000397938 LRCOL1A6NCL2 159 aa11.08□□□□□ -0.64
EWSR1-206ENST00000397938 DNAH10OSP0CZ25 163 aa11.08□□□□□ -0.64
EWSR1-206ENST00000397938 UBE2BP63146 152 aa11.07□□□□□ -0.64
EWSR1-206ENST00000397938 CYP4F30PQ9H0H9 118 aa11.07□□□□□ -0.64
EWSR1-206ENST00000397938 INAFM1C9JVW0 142 aa11.06□□□□□ -0.64
EWSR1-206ENST00000397938 MRPL55Q7Z7F7 128 aaKnown RBP11.06□□□□□ -0.64
EWSR1-206ENST00000397938 LINC00476Q8WZB0 136 aa11.06□□□□□ -0.64
EWSR1-206ENST00000397938 DEFB131BA0A096LNP1 70 aa11.05□□□□□ -0.64
EWSR1-206ENST00000397938 PSCAO43653 123 aa11.05□□□□□ -0.64
EWSR1-206ENST00000397938 CASC10Q5T4H9 136 aa11.03□□□□□ -0.64
EWSR1-206ENST00000397938 FASNP49327 2511 aaKnown RBP11.03□□□□□ -0.64
EWSR1-206ENST00000397938 ATRQ13535 2644 aa11.02□□□□□ -0.65
EWSR1-206ENST00000397938 REG3GQ6UW15 175 aa11.01□□□□□ -0.65
EWSR1-206ENST00000397938 IGFL1Q6UW32 110 aa11.01□□□□□ -0.65
EWSR1-206ENST00000397938 NDUFB1O75438 58 aa11.01□□□□□ -0.65
EWSR1-206ENST00000397938 PRR4Q16378 134 aa11.01□□□□□ -0.65
EWSR1-206ENST00000397938 PRR15Q8IV56 129 aa11.01□□□□□ -0.65
EWSR1-206ENST00000397938 A0A0G2JQZ4 141 aa11□□□□□ -0.65
EWSR1-206ENST00000397938 A0A1W2PNN7 141 aa11□□□□□ -0.65
EWSR1-206ENST00000397938 TEP1Q99973 2627 aaKnown RBP11□□□□□ -0.65
EWSR1-206ENST00000397938 KRTAP10-11P60412 298 aa10.99□□□□□ -0.65
EWSR1-206ENST00000397938 OXLD1Q5BKU9 147 aa10.99□□□□□ -0.65
EWSR1-206ENST00000397938 C11orf45Q8TAV5 145 aa10.99□□□□□ -0.65
EWSR1-206ENST00000397938 V9GYY9 64 aa10.98□□□□□ -0.65
EWSR1-206ENST00000397938 NSD1Q96L73 2696 aaPredicted RBP10.98□□□□□ -0.65
EWSR1-206ENST00000397938 TRAV22A0A0B4J277 110 aa10.97□□□□□ -0.65
EWSR1-206ENST00000397938 DEFB116Q30KQ4 102 aa10.97□□□□□ -0.65
EWSR1-206ENST00000397938 WFDC13Q8IUB5 93 aa10.97□□□□□ -0.65
EWSR1-206ENST00000397938 PSPHP1O15172 72 aa10.96□□□□□ -0.66
EWSR1-206ENST00000397938 MP68P56378 58 aa10.96□□□□□ -0.66
EWSR1-206ENST00000397938 TENM3Q9P273 2699 aa10.95□□□□□ -0.66
EWSR1-206ENST00000397938 IGLV8-61A0A075B6I0 122 aa10.94□□□□□ -0.66
EWSR1-206ENST00000397938 A0A087WSZ3 146 aa10.94□□□□□ -0.66
EWSR1-206ENST00000397938 HELZ2Q9BYK8 2649 aaKnown RBP10.94□□□□□ -0.66
EWSR1-206ENST00000397938 DNAH1Q9P2D7 4330 aa10.94□□□□□ -0.66
EWSR1-206ENST00000397938 LINC00588Q9Y4M8 146 aa10.94□□□□□ -0.66
EWSR1-206ENST00000397938 J3QKU1 62 aa10.93□□□□□ -0.66
EWSR1-206ENST00000397938 OTOGQ6ZRI0 2925 aa10.93□□□□□ -0.66
EWSR1-206ENST00000397938 KRTAP29-1A8MX34 341 aaPredicted RBP10.92□□□□□ -0.66
EWSR1-206ENST00000397938 LINC00208Q96KT6 92 aa10.91□□□□□ -0.66
EWSR1-206ENST00000397938 PRLHP81277 87 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms