RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 ESRGQ1W209 222 aa3.92□□□□□ -1.78
PTPRD-206ENST00000397617 KRTAP10-11P60412 298 aa3.91□□□□□ -1.78
PTPRD-206ENST00000397617 RNASE13Q5GAN3 156 aaKnown RBP3.91□□□□□ -1.78
PTPRD-206ENST00000397617 LINC00575Q6W349 94 aa3.91□□□□□ -1.78
PTPRD-206ENST00000397617 ZNF73O43830 326 aaPredicted RBP3.9□□□□□ -1.78
PTPRD-206ENST00000397617 EPM2AB3EWF7 344 aa3.9□□□□□ -1.78
PTPRD-206ENST00000397617 DEFB105AQ8NG35 78 aa3.9□□□□□ -1.79
PTPRD-206ENST00000397617 LIMD2Q9BT23 127 aa3.9□□□□□ -1.79
PTPRD-206ENST00000397617 LINC00528Q8N1L1 170 aa3.9□□□□□ -1.79
PTPRD-206ENST00000397617 Q8N814 137 aa3.9□□□□□ -1.79
PTPRD-206ENST00000397617 C6orf223Q8N319 242 aa3.9□□□□□ -1.79
PTPRD-206ENST00000397617 SMIM11BQ8TCY0 68 aa3.9□□□□□ -1.79
PTPRD-206ENST00000397617 CLEC2BQ92478 149 aa3.9□□□□□ -1.79
PTPRD-206ENST00000397617 Q8N9L7 120 aa3.89□□□□□ -1.79
PTPRD-206ENST00000397617 LECT2O14960 151 aa3.89□□□□□ -1.79
PTPRD-206ENST00000397617 ELOF1P60002 83 aaKnown RBP3.89□□□□□ -1.79
PTPRD-206ENST00000397617 NANOS2P60321 138 aaKnown RBP3.89□□□□□ -1.79
PTPRD-206ENST00000397617 UNQ6190/PRO20217Q6UXQ8 127 aa3.89□□□□□ -1.79
PTPRD-206ENST00000397617 C6orf48Q9UBA6 75 aa3.89□□□□□ -1.79
PTPRD-206ENST00000397617 SELENOKQ9Y6D0 94 aa3.89□□□□□ -1.79
PTPRD-206ENST00000397617 MEGF8Q7Z7M0 2845 aa3.89□□□□□ -1.79
PTPRD-206ENST00000397617 IGLV5-48A0A075B6I7 105 aa3.88□□□□□ -1.79
PTPRD-206ENST00000397617 C15orf56Q8N910 161 aa3.88□□□□□ -1.79
PTPRD-206ENST00000397617 TRAV23DV6A0A075B6W5 121 aa3.88□□□□□ -1.79
PTPRD-206ENST00000397617 CRYGAP11844 174 aa3.88□□□□□ -1.79
PTPRD-206ENST00000397617 H3BPC8 53 aa3.88□□□□□ -1.79
PTPRD-206ENST00000397617 CDIP1Q9H305 208 aa3.88□□□□□ -1.79
PTPRD-206ENST00000397617 SPRR1BP22528 89 aa3.88□□□□□ -1.79
PTPRD-206ENST00000397617 C9orf163Q8N9P6 203 aa3.88□□□□□ -1.79
PTPRD-206ENST00000397617 C6orf99Q4VX62 202 aa3.87□□□□□ -1.79
PTPRD-206ENST00000397617 HIGD2AQ9BW72 106 aa3.87□□□□□ -1.79
PTPRD-206ENST00000397617 LINC00588Q9Y4M8 146 aa3.87□□□□□ -1.79
PTPRD-206ENST00000397617 TRBV7-4A0A0J9YYF1 115 aa3.87□□□□□ -1.79
PTPRD-206ENST00000397617 ERC2-IT1O76042 136 aa3.87□□□□□ -1.79
PTPRD-206ENST00000397617 WFDC10BQ8IUB3 73 aa3.87□□□□□ -1.79
PTPRD-206ENST00000397617 CLPSL2Q6UWE3 100 aa3.87□□□□□ -1.79
PTPRD-206ENST00000397617 C16orf90A8MZG2 172 aa3.86□□□□□ -1.79
PTPRD-206ENST00000397617 IGLV8-61A0A075B6I0 122 aa3.86□□□□□ -1.79
PTPRD-206ENST00000397617 APLNQ9ULZ1 77 aa3.85□□□□□ -1.79
PTPRD-206ENST00000397617 KRTAP4-16G5E9R7 235 aaPredicted RBP3.85□□□□□ -1.79
PTPRD-206ENST00000397617 RETNQ9HD89 108 aa3.84□□□□□ -1.79
PTPRD-206ENST00000397617 TEX49A0A1B0GTD5 131 aa3.84□□□□□ -1.79
PTPRD-206ENST00000397617 Q6ZRX8 168 aa3.84□□□□□ -1.79
PTPRD-206ENST00000397617 FAM19A1Q7Z5A9 133 aa3.84□□□□□ -1.79
PTPRD-206ENST00000397617 CCDC179H3BU77 68 aa3.84□□□□□ -1.8
PTPRD-206ENST00000397617 PMAIP1Q13794 54 aa3.84□□□□□ -1.8
PTPRD-206ENST00000397617 CCKP06307 115 aa3.84□□□□□ -1.8
PTPRD-206ENST00000397617 CYP4F30PQ9H0H9 118 aa3.84□□□□□ -1.8
PTPRD-206ENST00000397617 IGKV2-24A0A0C4DH68 120 aa3.83□□□□□ -1.8
PTPRD-206ENST00000397617 COL7A1Q02388 2944 aa3.83□□□□□ -1.8
PTPRD-206ENST00000397617 hDV103S1A0JD37 113 aa3.83□□□□□ -1.8
PTPRD-206ENST00000397617 Q6ZRU5 148 aa3.83□□□□□ -1.8
PTPRD-206ENST00000397617 NBDYA0A0U1RRE5 68 aa3.83□□□□□ -1.8
PTPRD-206ENST00000397617 CD164Q04900 197 aa3.83□□□□□ -1.8
PTPRD-206ENST00000397617 DEFB4AO15263 64 aa3.82□□□□□ -1.8
PTPRD-206ENST00000397617 C10orf25Q5T742 122 aa3.82□□□□□ -1.8
PTPRD-206ENST00000397617 ZFHX3Q15911 3703 aa3.82□□□□□ -1.8
PTPRD-206ENST00000397617 XGP55808 180 aa3.82□□□□□ -1.8
PTPRD-206ENST00000397617 Q6ZQY7 126 aa3.82□□□□□ -1.8
PTPRD-206ENST00000397617 Q6ZR54 194 aa3.82□□□□□ -1.8
PTPRD-206ENST00000397617 C22orf24Q9Y442 160 aa3.82□□□□□ -1.8
PTPRD-206ENST00000397617 FAM19A5Q7Z5A7 132 aaPredicted RBP3.81□□□□□ -1.8
PTPRD-206ENST00000397617 MT-ATP8P03928 68 aa3.81□□□□□ -1.8
PTPRD-206ENST00000397617 Q6ZRP5 223 aa3.81□□□□□ -1.8
PTPRD-206ENST00000397617 SPRR4Q96PI1 79 aa3.81□□□□□ -1.8
PTPRD-206ENST00000397617 TNP2Q05952 138 aa3.81□□□□□ -1.8
PTPRD-206ENST00000397617 IGKV3D-7A0A0C4DH55 119 aa3.81□□□□□ -1.8
PTPRD-206ENST00000397617 FAM218AQ96MZ4 157 aa3.81□□□□□ -1.8
PTPRD-206ENST00000397617 IGLV1-50A0A075B6I6 118 aa3.8□□□□□ -1.8
PTPRD-206ENST00000397617 C3orf84H3BNL1 204 aa3.8□□□□□ -1.8
PTPRD-206ENST00000397617 DEFB104AQ8WTQ1 72 aa3.8□□□□□ -1.8
PTPRD-206ENST00000397617 FAM30AQ9NZY2 134 aa3.8□□□□□ -1.8
PTPRD-206ENST00000397617 CSMD1Q96PZ7 3565 aa3.8□□□□□ -1.8
PTPRD-206ENST00000397617 NCR3O14931 201 aa3.8□□□□□ -1.8
PTPRD-206ENST00000397617 LINC00336Q6ZUF6 198 aa3.8□□□□□ -1.8
PTPRD-206ENST00000397617 Q8NBF4 154 aa3.79□□□□□ -1.8
PTPRD-206ENST00000397617 Q6ZQT0 140 aa3.79□□□□□ -1.8
PTPRD-206ENST00000397617 Q6ZRN7 208 aaPredicted RBP3.79□□□□□ -1.8
PTPRD-206ENST00000397617 SVEP1Q4LDE5 3571 aa3.79□□□□□ -1.8
PTPRD-206ENST00000397617 A6NED7 52 aa3.79□□□□□ -1.8
PTPRD-206ENST00000397617 TRRAPQ9Y4A5 3859 aa3.79□□□□□ -1.8
PTPRD-206ENST00000397617 ANK3Q12955 4377 aaKnown RBP3.78□□□□□ -1.8
PTPRD-206ENST00000397617 C20orf197Q8N268 126 aa3.78□□□□□ -1.8
PTPRD-206ENST00000397617 XAGE1AQ9HD64 81 aa3.78□□□□□ -1.8
PTPRD-206ENST00000397617 A0A087WYN8 130 aa3.77□□□□□ -1.81
PTPRD-206ENST00000397617 Q6ZVQ6 151 aa3.77□□□□□ -1.81
PTPRD-206ENST00000397617 TP53AIP1Q9HCN2 124 aa3.77□□□□□ -1.81
PTPRD-206ENST00000397617 DMBT1Q9UGM3 2413 aaPredicted RBP3.77□□□□□ -1.81
PTPRD-206ENST00000397617 ZNF469Q96JG9 3925 aaPredicted RBP3.77□□□□□ -1.81
PTPRD-206ENST00000397617 C9orf129Q5T035 196 aaKnown RBP3.77□□□□□ -1.81
PTPRD-206ENST00000397617 LRCOL1A6NCL2 159 aa3.77□□□□□ -1.81
PTPRD-206ENST00000397617 WWC2-AS2Q96NR7 200 aa3.77□□□□□ -1.81
PTPRD-206ENST00000397617 NBPF19A0A087WUL8 3843 aa3.76□□□□□ -1.81
PTPRD-206ENST00000397617 LINC01547P58512 204 aaPredicted RBP3.76□□□□□ -1.81
PTPRD-206ENST00000397617 REG3GQ6UW15 175 aa3.75□□□□□ -1.81
PTPRD-206ENST00000397617 HCG22E2RYF7 251 aa3.75□□□□□ -1.81
PTPRD-206ENST00000397617 C9orf116Q5BN46 136 aaPredicted RBP3.75□□□□□ -1.81
PTPRD-206ENST00000397617 CSMD2Q7Z408 3487 aa3.75□□□□□ -1.81
PTPRD-206ENST00000397617 LINC00846Q9NV44 126 aa3.75□□□□□ -1.81
PTPRD-206ENST00000397617 PLAC8Q9NZF1 115 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms