RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 CBY1Q9Y3M2 126 aa17.2■□□□□ 0.34
CPNE1-203ENST00000397442 LYRM7Q5U5X0 104 aa17.2■□□□□ 0.34
CPNE1-203ENST00000397442 SPCS1Q9Y6A9 102 aa17.2■□□□□ 0.34
CPNE1-203ENST00000397442 PRYO14603 147 aa17.19■□□□□ 0.34
CPNE1-203ENST00000397442 CLEC2BQ92478 149 aa17.19■□□□□ 0.34
CPNE1-203ENST00000397442 DIRC1Q969H9 104 aa17.19■□□□□ 0.34
CPNE1-203ENST00000397442 TCL1BO95988 128 aa17.18■□□□□ 0.34
CPNE1-203ENST00000397442 SPRR1AP35321 89 aa17.16■□□□□ 0.34
CPNE1-203ENST00000397442 CIRBP-AS1Q8TBR5 109 aa17.16■□□□□ 0.34
CPNE1-203ENST00000397442 K7EP34 96 aa17.16■□□□□ 0.34
CPNE1-203ENST00000397442 FAM218AQ96MZ4 157 aa17.16■□□□□ 0.34
CPNE1-203ENST00000397442 KRTAP4-16G5E9R7 235 aaPredicted RBP17.14■□□□□ 0.33
CPNE1-203ENST00000397442 H0YGX0 51 aa17.14■□□□□ 0.33
CPNE1-203ENST00000397442 UBE2BP63146 152 aa17.14■□□□□ 0.33
CPNE1-203ENST00000397442 SCXQ7RTU7 201 aa17.14■□□□□ 0.33
CPNE1-203ENST00000397442 TRBV20-1A0A075B6N2 111 aa17.13■□□□□ 0.33
CPNE1-203ENST00000397442 TRBV7-6A0A0J9YX20 115 aa17.13■□□□□ 0.33
CPNE1-203ENST00000397442 REG3GQ6UW15 175 aa17.12■□□□□ 0.33
CPNE1-203ENST00000397442 LRP1BQ9NZR2 4599 aa17.11■□□□□ 0.33
CPNE1-203ENST00000397442 LST1O00453 97 aa17.1■□□□□ 0.33
CPNE1-203ENST00000397442 ELOF1P60002 83 aaKnown RBP17.1■□□□□ 0.33
CPNE1-203ENST00000397442 DYNC1H1Q14204 4646 aaKnown RBP17.1■□□□□ 0.33
CPNE1-203ENST00000397442 COX7BP24311 80 aa17.09■□□□□ 0.33
CPNE1-203ENST00000397442 HAMPP81172 84 aa17.09■□□□□ 0.33
CPNE1-203ENST00000397442 H3BMG7 143 aa17.08■□□□□ 0.32
CPNE1-203ENST00000397442 ATXN8Q156A1 80 aa17.07■□□□□ 0.32
CPNE1-203ENST00000397442 GTF2H5Q6ZYL4 71 aa17.07■□□□□ 0.32
CPNE1-203ENST00000397442 LINC00528Q8N1L1 170 aa17.07■□□□□ 0.32
CPNE1-203ENST00000397442 LINC00575Q6W349 94 aa17.06■□□□□ 0.32
CPNE1-203ENST00000397442 B5MCH6 92 aa17.05■□□□□ 0.32
CPNE1-203ENST00000397442 ETDCA0A1B0GVM5 59 aa17.04■□□□□ 0.32
CPNE1-203ENST00000397442 UBE2V1Q13404 147 aa17.04■□□□□ 0.32
CPNE1-203ENST00000397442 Q6ZRX8 168 aa17.03■□□□□ 0.32
CPNE1-203ENST00000397442 TRACP01848 142 aa17.01■□□□□ 0.31
CPNE1-203ENST00000397442 PSORS1C2Q9UIG4 136 aa16.99■□□□□ 0.31
CPNE1-203ENST00000397442 A0A1B0GX51 115 aa16.98■□□□□ 0.31
CPNE1-203ENST00000397442 Q9BRP9 147 aa16.98■□□□□ 0.31
CPNE1-203ENST00000397442 FAM19A1Q7Z5A9 133 aa16.97■□□□□ 0.31
CPNE1-203ENST00000397442 XGP55808 180 aa16.97■□□□□ 0.31
CPNE1-203ENST00000397442 hADV29S1A0JD25 119 aa16.96■□□□□ 0.31
CPNE1-203ENST00000397442 BCE1O60756 84 aa16.96■□□□□ 0.31
CPNE1-203ENST00000397442 PRLHP81277 87 aa16.95■□□□□ 0.3
CPNE1-203ENST00000397442 MTURNQ8N3F0 131 aa16.95■□□□□ 0.3
CPNE1-203ENST00000397442 PRO0461Q9UI25 63 aa16.94■□□□□ 0.3
CPNE1-203ENST00000397442 C9JAW5 83 aa16.93■□□□□ 0.3
CPNE1-203ENST00000397442 SLC25A20O43772 301 aa16.93■□□□□ 0.3
CPNE1-203ENST00000397442 INAFM2P0DMQ5 153 aa16.93■□□□□ 0.3
CPNE1-203ENST00000397442 H0Y9J4 135 aa16.91■□□□□ 0.3
CPNE1-203ENST00000397442 KRTAP13-1Q8IUC0 172 aa16.91■□□□□ 0.3
CPNE1-203ENST00000397442 SMCR5Q8TEV8 140 aa16.91■□□□□ 0.3
CPNE1-203ENST00000397442 DHRS4-AS1Q9P1J3 65 aa16.91■□□□□ 0.3
CPNE1-203ENST00000397442 DNAL4O96015 105 aa16.89■□□□□ 0.29
CPNE1-203ENST00000397442 APOBP04114 4563 aaKnown RBP16.89■□□□□ 0.29
CPNE1-203ENST00000397442 SNCGO76070 127 aa16.88■□□□□ 0.29
CPNE1-203ENST00000397442 C1orf137Q5JT78 98 aa16.88■□□□□ 0.29
CPNE1-203ENST00000397442 ERC2-IT1O76042 136 aa16.88■□□□□ 0.29
CPNE1-203ENST00000397442 SMCPP49901 116 aaPredicted RBP16.88■□□□□ 0.29
CPNE1-203ENST00000397442 UBE2AP49459 152 aa16.87■□□□□ 0.29
CPNE1-203ENST00000397442 Q6ZQY7 126 aa16.87■□□□□ 0.29
CPNE1-203ENST00000397442 F8W1H4 67 aa16.84■□□□□ 0.29
CPNE1-203ENST00000397442 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.84■□□□□ 0.29
CPNE1-203ENST00000397442 HIGD2AQ9BW72 106 aa16.83■□□□□ 0.28
CPNE1-203ENST00000397442 ORMDL1Q9P0S3 153 aa16.81■□□□□ 0.28
CPNE1-203ENST00000397442 BAALC-AS2P0C853 105 aa16.81■□□□□ 0.28
CPNE1-203ENST00000397442 LINC01600Q96MT4 127 aa16.8■□□□□ 0.28
CPNE1-203ENST00000397442 H3BT86 120 aa16.79■□□□□ 0.28
CPNE1-203ENST00000397442 IGLV7-43P04211 117 aa16.79■□□□□ 0.28
CPNE1-203ENST00000397442 ANKRD29Q8N6D5 301 aa16.79■□□□□ 0.28
CPNE1-203ENST00000397442 SRRM2Q9UQ35 2752 aaKnown RBP16.78■□□□□ 0.28
CPNE1-203ENST00000397442 ST20-AS1Q8NBB2 130 aa16.78■□□□□ 0.28
CPNE1-203ENST00000397442 ZNF861PO60384 105 aa16.77■□□□□ 0.28
CPNE1-203ENST00000397442 LINC01547P58512 204 aaPredicted RBP16.75■□□□□ 0.27
CPNE1-203ENST00000397442 SMR3BP02814 79 aaPredicted RBP16.75■□□□□ 0.27
CPNE1-203ENST00000397442 OCIAD2Q56VL3 154 aa16.74■□□□□ 0.27
CPNE1-203ENST00000397442 VPS13BQ7Z7G8 4022 aa16.72■□□□□ 0.27
CPNE1-203ENST00000397442 IGLV5-48A0A075B6I7 105 aa16.72■□□□□ 0.27
CPNE1-203ENST00000397442 EPPK1P58107 5090 aaKnown RBP16.71■□□□□ 0.27
CPNE1-203ENST00000397442 TMEM256-PLSCR3K7ERE1 68 aa16.7■□□□□ 0.26
CPNE1-203ENST00000397442 CDK2AP2O75956 126 aa16.7■□□□□ 0.26
CPNE1-203ENST00000397442 Q8N377 158 aa16.69■□□□□ 0.26
CPNE1-203ENST00000397442 DEFB105AQ8NG35 78 aa16.69■□□□□ 0.26
CPNE1-203ENST00000397442 H3BQ85 93 aa16.66■□□□□ 0.26
CPNE1-203ENST00000397442 RPL37AP61513 92 aaKnown RBP16.66■□□□□ 0.26
CPNE1-203ENST00000397442 ETDBQ3ZM63 59 aa16.66■□□□□ 0.26
CPNE1-203ENST00000397442 GHRHP01286 108 aa16.65■□□□□ 0.26
CPNE1-203ENST00000397442 PPDPFLQ8WWR9 84 aa16.63■□□□□ 0.25
CPNE1-203ENST00000397442 TEN1Q86WV5 123 aa16.62■□□□□ 0.25
CPNE1-203ENST00000397442 TEX49A0A1B0GTD5 131 aa16.62■□□□□ 0.25
CPNE1-203ENST00000397442 KRTAP10-4P60372 401 aaPredicted RBP16.62■□□□□ 0.25
CPNE1-203ENST00000397442 FAT1Q14517 4588 aa16.6■□□□□ 0.25
CPNE1-203ENST00000397442 SPRR4Q96PI1 79 aa16.6■□□□□ 0.25
CPNE1-203ENST00000397442 SPRR1BP22528 89 aa16.59■□□□□ 0.25
CPNE1-203ENST00000397442 GAGE2AQ6NT46 116 aa16.59■□□□□ 0.25
CPNE1-203ENST00000397442 HSPG2P98160 4391 aa16.58■□□□□ 0.25
CPNE1-203ENST00000397442 C3orf22Q8N5N4 141 aa16.58■□□□□ 0.24
CPNE1-203ENST00000397442 NDUFV3P56181 108 aaKnown RBP16.57■□□□□ 0.24
CPNE1-203ENST00000397442 SMIM29Q86T20 159 aa16.57■□□□□ 0.24
CPNE1-203ENST00000397442 OBSCN-AS1Q96MR7 158 aa16.56■□□□□ 0.24
CPNE1-203ENST00000397442 LAMTOR3Q9UHA4 124 aa16.56■□□□□ 0.24
CPNE1-203ENST00000397442 RYR1P21817 5038 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms