RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 Q1RN00 199 aa10.59□□□□□ -0.71
TSPAN4-205ENST00000397406 CIRBP-AS1Q8TBR5 109 aa10.59□□□□□ -0.71
TSPAN4-205ENST00000397406 SCXQ7RTU7 201 aa10.58□□□□□ -0.72
TSPAN4-205ENST00000397406 NAA38Q9BRA0 125 aaKnown RBP10.58□□□□□ -0.72
TSPAN4-205ENST00000397406 VPS13BQ7Z7G8 4022 aa10.58□□□□□ -0.72
TSPAN4-205ENST00000397406 TRAV23DV6A0A075B6W5 121 aa10.58□□□□□ -0.72
TSPAN4-205ENST00000397406 C9orf118A6NHY6 69 aa10.58□□□□□ -0.72
TSPAN4-205ENST00000397406 RPL28P46779 137 aaKnown RBP10.58□□□□□ -0.72
TSPAN4-205ENST00000397406 KCNQ1DNQ9H478 68 aa10.58□□□□□ -0.72
TSPAN4-205ENST00000397406 SMR3BP02814 79 aaPredicted RBP10.57□□□□□ -0.72
TSPAN4-205ENST00000397406 KRTAP11-1Q8IUC1 163 aa10.57□□□□□ -0.72
TSPAN4-205ENST00000397406 H3BUT2 72 aa10.55□□□□□ -0.72
TSPAN4-205ENST00000397406 PRYO14603 147 aa10.55□□□□□ -0.72
TSPAN4-205ENST00000397406 TRIAP1O43715 76 aa10.55□□□□□ -0.72
TSPAN4-205ENST00000397406 Q5VSD8 79 aa10.55□□□□□ -0.72
TSPAN4-205ENST00000397406 CBY1Q9Y3M2 126 aa10.55□□□□□ -0.72
TSPAN4-205ENST00000397406 UBE2BP63146 152 aa10.54□□□□□ -0.72
TSPAN4-205ENST00000397406 HERC1Q15751 4861 aa10.54□□□□□ -0.72
TSPAN4-205ENST00000397406 PSMB2P49721 201 aa10.53□□□□□ -0.72
TSPAN4-205ENST00000397406 C6orf99Q4VX62 202 aa10.53□□□□□ -0.72
TSPAN4-205ENST00000397406 ZNF73O43830 326 aaPredicted RBP10.52□□□□□ -0.73
TSPAN4-205ENST00000397406 SPRR1AP35321 89 aa10.52□□□□□ -0.73
TSPAN4-205ENST00000397406 MYCBP2O75592 4640 aa10.52□□□□□ -0.73
TSPAN4-205ENST00000397406 DIRC1Q969H9 104 aa10.51□□□□□ -0.73
TSPAN4-205ENST00000397406 A0A1W2PPM0 123 aa10.5□□□□□ -0.73
TSPAN4-205ENST00000397406 KRTAP4-16G5E9R7 235 aaPredicted RBP10.5□□□□□ -0.73
TSPAN4-205ENST00000397406 REG3GQ6UW15 175 aa10.5□□□□□ -0.73
TSPAN4-205ENST00000397406 INAFM2P0DMQ5 153 aa10.49□□□□□ -0.73
TSPAN4-205ENST00000397406 SRRM2Q9UQ35 2752 aaKnown RBP10.48□□□□□ -0.73
TSPAN4-205ENST00000397406 TRBV7-6A0A0J9YX20 115 aa10.48□□□□□ -0.73
TSPAN4-205ENST00000397406 COX6CP09669 75 aa10.48□□□□□ -0.73
TSPAN4-205ENST00000397406 SCGB1C2P0DMR2 95 aa10.46□□□□□ -0.74
TSPAN4-205ENST00000397406 ELOF1P60002 83 aaKnown RBP10.46□□□□□ -0.74
TSPAN4-205ENST00000397406 VAMP3Q15836 100 aa10.46□□□□□ -0.74
TSPAN4-205ENST00000397406 PSORS1C2Q9UIG4 136 aa10.46□□□□□ -0.74
TSPAN4-205ENST00000397406 ETDCA0A1B0GVM5 59 aa10.45□□□□□ -0.74
TSPAN4-205ENST00000397406 B5MCH6 92 aa10.45□□□□□ -0.74
TSPAN4-205ENST00000397406 H0YGX0 51 aa10.45□□□□□ -0.74
TSPAN4-205ENST00000397406 FABP2P12104 132 aa10.45□□□□□ -0.74
TSPAN4-205ENST00000397406 COX7BP24311 80 aa10.45□□□□□ -0.74
TSPAN4-205ENST00000397406 LYRM7Q5U5X0 104 aa10.45□□□□□ -0.74
TSPAN4-205ENST00000397406 LINC00528Q8N1L1 170 aa10.44□□□□□ -0.74
TSPAN4-205ENST00000397406 CLEC2BQ92478 149 aa10.44□□□□□ -0.74
TSPAN4-205ENST00000397406 FAM218AQ96MZ4 157 aa10.44□□□□□ -0.74
TSPAN4-205ENST00000397406 BCE1O60756 84 aa10.42□□□□□ -0.74
TSPAN4-205ENST00000397406 TCL1BO95988 128 aa10.42□□□□□ -0.74
TSPAN4-205ENST00000397406 Q6ZRX8 168 aa10.42□□□□□ -0.74
TSPAN4-205ENST00000397406 FLG2Q5D862 2391 aaPredicted RBP10.42□□□□□ -0.74
TSPAN4-205ENST00000397406 A0A1B0GV90 55 aa10.41□□□□□ -0.74
TSPAN4-205ENST00000397406 FAM19A1Q7Z5A9 133 aa10.41□□□□□ -0.74
TSPAN4-205ENST00000397406 LINC00575Q6W349 94 aa10.41□□□□□ -0.74
TSPAN4-205ENST00000397406 SPCS1Q9Y6A9 102 aa10.41□□□□□ -0.74
TSPAN4-205ENST00000397406 TRBV20-1A0A075B6N2 111 aa10.4□□□□□ -0.75
TSPAN4-205ENST00000397406 LST1O00453 97 aa10.4□□□□□ -0.75
TSPAN4-205ENST00000397406 KRTAP10-4P60372 401 aaPredicted RBP10.4□□□□□ -0.75
TSPAN4-205ENST00000397406 KRTAP13-1Q8IUC0 172 aa10.4□□□□□ -0.75
TSPAN4-205ENST00000397406 H0Y9J4 135 aa10.39□□□□□ -0.75
TSPAN4-205ENST00000397406 FAM229AH3BQW9 127 aa10.39□□□□□ -0.75
TSPAN4-205ENST00000397406 PRLHP81277 87 aa10.39□□□□□ -0.75
TSPAN4-205ENST00000397406 C1orf137Q5JT78 98 aa10.39□□□□□ -0.75
TSPAN4-205ENST00000397406 Q9BRP9 147 aa10.39□□□□□ -0.75
TSPAN4-205ENST00000397406 K7EP34 96 aa10.38□□□□□ -0.75
TSPAN4-205ENST00000397406 A0A1B0GX51 115 aa10.37□□□□□ -0.75
TSPAN4-205ENST00000397406 ATXN8Q156A1 80 aa10.37□□□□□ -0.75
TSPAN4-205ENST00000397406 UBE2AP49459 152 aa10.36□□□□□ -0.75
TSPAN4-205ENST00000397406 SMCR5Q8TEV8 140 aa10.36□□□□□ -0.75
TSPAN4-205ENST00000397406 hADV29S1A0JD25 119 aa10.35□□□□□ -0.75
TSPAN4-205ENST00000397406 TRACP01848 142 aa10.35□□□□□ -0.75
TSPAN4-205ENST00000397406 DHRS4-AS1Q9P1J3 65 aa10.35□□□□□ -0.75
TSPAN4-205ENST00000397406 SLC25A20O43772 301 aa10.34□□□□□ -0.75
TSPAN4-205ENST00000397406 IGLV7-43P04211 117 aa10.34□□□□□ -0.75
TSPAN4-205ENST00000397406 DMBT1Q9UGM3 2413 aaPredicted RBP10.34□□□□□ -0.75
TSPAN4-205ENST00000397406 H3BMG7 143 aa10.33□□□□□ -0.76
TSPAN4-205ENST00000397406 LRP1Q07954 4544 aaKnown RBP10.33□□□□□ -0.76
TSPAN4-205ENST00000397406 ERC2-IT1O76042 136 aa10.33□□□□□ -0.76
TSPAN4-205ENST00000397406 GTF2H5Q6ZYL4 71 aa10.33□□□□□ -0.76
TSPAN4-205ENST00000397406 ZNF861PO60384 105 aa10.32□□□□□ -0.76
TSPAN4-205ENST00000397406 RPL37AP61513 92 aaKnown RBP10.32□□□□□ -0.76
TSPAN4-205ENST00000397406 HIGD2AQ9BW72 106 aa10.32□□□□□ -0.76
TSPAN4-205ENST00000397406 SNCGO76070 127 aa10.31□□□□□ -0.76
TSPAN4-205ENST00000397406 DNAL4O96015 105 aa10.29□□□□□ -0.76
TSPAN4-205ENST00000397406 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.29□□□□□ -0.76
TSPAN4-205ENST00000397406 Q6ZQY7 126 aa10.29□□□□□ -0.76
TSPAN4-205ENST00000397406 C9JAW5 83 aa10.27□□□□□ -0.77
TSPAN4-205ENST00000397406 PLA2G1BP04054 148 aaKnown RBP10.27□□□□□ -0.77
TSPAN4-205ENST00000397406 UBE2V1Q13404 147 aa10.27□□□□□ -0.77
TSPAN4-205ENST00000397406 FAT3Q8TDW7 4589 aa10.27□□□□□ -0.77
TSPAN4-205ENST00000397406 ST20-AS1Q8NBB2 130 aa10.26□□□□□ -0.77
TSPAN4-205ENST00000397406 MTURNQ8N3F0 131 aa10.25□□□□□ -0.77
TSPAN4-205ENST00000397406 LINC01547P58512 204 aaPredicted RBP10.24□□□□□ -0.77
TSPAN4-205ENST00000397406 ORMDL1Q9P0S3 153 aa10.24□□□□□ -0.77
TSPAN4-205ENST00000397406 PRO0461Q9UI25 63 aa10.24□□□□□ -0.77
TSPAN4-205ENST00000397406 KRTAP29-1A8MX34 341 aaPredicted RBP10.24□□□□□ -0.77
TSPAN4-205ENST00000397406 OCIAD2Q56VL3 154 aa10.24□□□□□ -0.77
TSPAN4-205ENST00000397406 PKHD1L1Q86WI1 4243 aa10.23□□□□□ -0.77
TSPAN4-205ENST00000397406 IGLV5-48A0A075B6I7 105 aa10.23□□□□□ -0.77
TSPAN4-205ENST00000397406 BAALC-AS2P0C853 105 aa10.22□□□□□ -0.77
TSPAN4-205ENST00000397406 SMCPP49901 116 aaPredicted RBP10.21□□□□□ -0.78
TSPAN4-205ENST00000397406 H3BT86 120 aa10.2□□□□□ -0.78
TSPAN4-205ENST00000397406 Q8N377 158 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms